RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 LRRC75A-AS1Q8N1F1 130 aa9.01□□□□□ -0.97
PTPN1-201ENST00000371621 TLN1Q9Y490 2541 aaKnown RBP9.01□□□□□ -0.97
PTPN1-201ENST00000371621 MUC22E2RYF6 1773 aaPredicted RBP9.01□□□□□ -0.97
PTPN1-201ENST00000371621 IGF1P05019 195 aa9.01□□□□□ -0.97
PTPN1-201ENST00000371621 Q6Q795 121 aa9.01□□□□□ -0.97
PTPN1-201ENST00000371621 ADAMTS20P59510 1910 aa9.01□□□□□ -0.97
PTPN1-201ENST00000371621 ODF3Q96PU9 254 aa9.01□□□□□ -0.97
PTPN1-201ENST00000371621 A0A0J9YXY3 114 aa9□□□□□ -0.97
PTPN1-201ENST00000371621 IGLV2-23P01705 113 aa9□□□□□ -0.97
PTPN1-201ENST00000371621 C9orf139Q6ZV77 190 aa9□□□□□ -0.97
PTPN1-201ENST00000371621 MDS2Q8NDY4 140 aa9□□□□□ -0.97
PTPN1-201ENST00000371621 UBL5Q9BZL1 73 aa9□□□□□ -0.97
PTPN1-201ENST00000371621 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9□□□□□ -0.97
PTPN1-201ENST00000371621 IGKV2-29A2NJV5 120 aaPredicted RBP9□□□□□ -0.97
PTPN1-201ENST00000371621 WISP2O76076 250 aa9□□□□□ -0.97
PTPN1-201ENST00000371621 ATP5G1P05496 136 aa9□□□□□ -0.97
PTPN1-201ENST00000371621 SPINK13Q1W4C9 94 aa9□□□□□ -0.97
PTPN1-201ENST00000371621 SUMO4Q6EEV6 95 aa9□□□□□ -0.97
PTPN1-201ENST00000371621 V9GYY9 64 aa9□□□□□ -0.97
PTPN1-201ENST00000371621 LY6G6EA0A0G2JKS1 128 aa8.99□□□□□ -0.97
PTPN1-201ENST00000371621 IGHV3-53P01767 116 aa8.99□□□□□ -0.97
PTPN1-201ENST00000371621 ZMAT4Q9H898 229 aa8.99□□□□□ -0.97
PTPN1-201ENST00000371621 U3KQA8 63 aa8.99□□□□□ -0.97
PTPN1-201ENST00000371621 DSCAMO60469 2012 aa8.99□□□□□ -0.97
PTPN1-201ENST00000371621 RPL36AP83881 106 aaKnown RBP8.99□□□□□ -0.97
PTPN1-201ENST00000371621 RPL36ALQ969Q0 106 aaKnown RBP8.99□□□□□ -0.97
PTPN1-201ENST00000371621 B9A039 149 aa8.98□□□□□ -0.97
PTPN1-201ENST00000371621 KIR2DL5BQ8NHK3 375 aa8.98□□□□□ -0.97
PTPN1-201ENST00000371621 SPANXDQ9BXN6 97 aa8.98□□□□□ -0.97
PTPN1-201ENST00000371621 TEX22C9J3V5 150 aa8.98□□□□□ -0.97
PTPN1-201ENST00000371621 IGHV1-69DA0A0B4J2H0 117 aa8.98□□□□□ -0.97
PTPN1-201ENST00000371621 CTSGP08311 255 aa8.98□□□□□ -0.97
PTPN1-201ENST00000371621 RPL35AP18077 110 aaKnown RBP8.98□□□□□ -0.97
PTPN1-201ENST00000371621 NRACQ8N912 160 aa8.98□□□□□ -0.97
PTPN1-201ENST00000371621 DAD1P61803 113 aa8.97□□□□□ -0.97
PTPN1-201ENST00000371621 TMEM190Q8WZ59 177 aa8.97□□□□□ -0.97
PTPN1-201ENST00000371621 LINC01587Q99440 93 aa8.97□□□□□ -0.97
PTPN1-201ENST00000371621 CPAMD8Q8IZJ3 1885 aa8.97□□□□□ -0.97
PTPN1-201ENST00000371621 THBDP07204 575 aa8.97□□□□□ -0.97
PTPN1-201ENST00000371621 CGB3P0DN86 165 aa8.97□□□□□ -0.97
PTPN1-201ENST00000371621 CGB7P0DN87 165 aa8.97□□□□□ -0.97
PTPN1-201ENST00000371621 C11orf21Q9P2W6 132 aa8.97□□□□□ -0.97
PTPN1-201ENST00000371621 TSPEAR-AS2P59090 65 aa8.97□□□□□ -0.97
PTPN1-201ENST00000371621 WFDC9Q8NEX5 89 aa8.97□□□□□ -0.97
PTPN1-201ENST00000371621 LINC00526Q96FQ7 95 aa8.97□□□□□ -0.97
PTPN1-201ENST00000371621 RHPN1-AS1Q9BWJ2 59 aa8.96□□□□□ -0.97
PTPN1-201ENST00000371621 LOC400499M0QZD8 3231 aa8.96□□□□□ -0.97
PTPN1-201ENST00000371621 ATP6V0E1O15342 81 aa8.96□□□□□ -0.97
PTPN1-201ENST00000371621 ELANEP08246 267 aa8.96□□□□□ -0.97
PTPN1-201ENST00000371621 SPANXCQ9NY87 97 aa8.96□□□□□ -0.97
PTPN1-201ENST00000371621 MDFICQ9P1T7 246 aa8.96□□□□□ -0.97
PTPN1-201ENST00000371621 IGHV1OR15-1A0A075B7D0 117 aa8.96□□□□□ -0.98
PTPN1-201ENST00000371621 BRI3O95415 125 aa8.96□□□□□ -0.98
PTPN1-201ENST00000371621 P0DMU3 169 aa8.96□□□□□ -0.98
PTPN1-201ENST00000371621 FAM231AP0DMU4 169 aa8.96□□□□□ -0.98
PTPN1-201ENST00000371621 FAM231CP0DMU5 169 aa8.96□□□□□ -0.98
PTPN1-201ENST00000371621 ZNF580Q9UK33 172 aa8.96□□□□□ -0.98
PTPN1-201ENST00000371621 PKD1L2Q7Z442 2459 aa8.96□□□□□ -0.98
PTPN1-201ENST00000371621 CCDC168Q8NDH2 2452 aa8.96□□□□□ -0.98
PTPN1-201ENST00000371621 TRBV30A0A0K0K1B3 111 aa8.96□□□□□ -0.98
PTPN1-201ENST00000371621 USP17L23D6RBM5 183 aa8.96□□□□□ -0.98
PTPN1-201ENST00000371621 LECT2O14960 151 aa8.96□□□□□ -0.98
PTPN1-201ENST00000371621 LHBP01229 141 aa8.96□□□□□ -0.98
PTPN1-201ENST00000371621 GATA4P43694 442 aa8.96□□□□□ -0.98
PTPN1-201ENST00000371621 DEFB123Q8N688 67 aa8.96□□□□□ -0.98
PTPN1-201ENST00000371621 OVOL3O00110 214 aa8.95□□□□□ -0.98
PTPN1-201ENST00000371621 USP9YO00507 2555 aaPredicted RBP8.95□□□□□ -0.98
PTPN1-201ENST00000371621 BUB3O43684 328 aa8.95□□□□□ -0.98
PTPN1-201ENST00000371621 IGHG2P01859 326 aa8.95□□□□□ -0.98
PTPN1-201ENST00000371621 ZNRF2Q8NHG8 242 aa8.95□□□□□ -0.98
PTPN1-201ENST00000371621 TMEM263Q8WUH6 116 aaKnown RBP8.95□□□□□ -0.98
PTPN1-201ENST00000371621 ABCA2Q9BZC7 2435 aa8.95□□□□□ -0.98
PTPN1-201ENST00000371621 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.95□□□□□ -0.98
PTPN1-201ENST00000371621 IGLV1-44P01699 117 aa8.95□□□□□ -0.98
PTPN1-201ENST00000371621 TMEM258P61165 79 aa8.95□□□□□ -0.98
PTPN1-201ENST00000371621 VMO1Q7Z5L0 202 aa8.95□□□□□ -0.98
PTPN1-201ENST00000371621 TRBV6-1A0A0K0K1D8 114 aa8.94□□□□□ -0.98
PTPN1-201ENST00000371621 CD59P13987 128 aa8.94□□□□□ -0.98
PTPN1-201ENST00000371621 PSMB8P28062 276 aa8.94□□□□□ -0.98
PTPN1-201ENST00000371621 SERP2Q8N6R1 65 aa8.94□□□□□ -0.98
PTPN1-201ENST00000371621 ITLN2Q8WWU7 325 aaPredicted RBP8.94□□□□□ -0.98
PTPN1-201ENST00000371621 SNURFQ9Y675 71 aa8.94□□□□□ -0.98
PTPN1-201ENST00000371621 NOTCH2Q04721 2471 aa8.94□□□□□ -0.98
PTPN1-201ENST00000371621 MALP21145 153 aa8.94□□□□□ -0.98
PTPN1-201ENST00000371621 LINC00311Q8N616 119 aa8.94□□□□□ -0.98
PTPN1-201ENST00000371621 RNF5Q99942 180 aa8.94□□□□□ -0.98
PTPN1-201ENST00000371621 USP9XQ93008 2570 aaPredicted RBP8.94□□□□□ -0.98
PTPN1-201ENST00000371621 FAM236DA0A1B0GTK5 79 aa8.93□□□□□ -0.98
PTPN1-201ENST00000371621 CCL21O00585 134 aa8.93□□□□□ -0.98
PTPN1-201ENST00000371621 SLPIP03973 132 aa8.93□□□□□ -0.98
PTPN1-201ENST00000371621 FAM236CP0DP71 79 aa8.93□□□□□ -0.98
PTPN1-201ENST00000371621 TIRAPP58753 221 aa8.93□□□□□ -0.98
PTPN1-201ENST00000371621 RPL18AQ02543 176 aaKnown RBP8.93□□□□□ -0.98
PTPN1-201ENST00000371621 C6orf226Q5I0X4 101 aa8.93□□□□□ -0.98
PTPN1-201ENST00000371621 MBD3L2Q8NHZ7 208 aaPredicted RBP8.93□□□□□ -0.98
PTPN1-201ENST00000371621 TIMM17AQ99595 171 aa8.93□□□□□ -0.98
PTPN1-201ENST00000371621 IMUPQ9GZP8 106 aa8.93□□□□□ -0.98
PTPN1-201ENST00000371621 ZNF672Q499Z4 452 aaPredicted RBP8.92□□□□□ -0.98
PTPN1-201ENST00000371621 TMEM86BQ8N661 226 aa8.92□□□□□ -0.98
PTPN1-201ENST00000371621 LST1O00453 97 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms