RNA–Protein interactions for RNA: ENST00000370852.6

HMGCLL1-204, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2

Gene HMGCLL1, Length 2,445 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-204ENST00000370852 COX7CP15954 63 aa7□□□□□ -1.29
HMGCLL1-204ENST00000370852 DCANP1Q8TF63 244 aa7□□□□□ -1.29
HMGCLL1-204ENST00000370852 CUBNO60494 3623 aa7□□□□□ -1.29
HMGCLL1-204ENST00000370852 TRBV7-1A0A0A6YYK4 115 aa7□□□□□ -1.29
HMGCLL1-204ENST00000370852 C22orf24Q9Y442 160 aa7□□□□□ -1.29
HMGCLL1-204ENST00000370852 IGHV1-69DA0A0B4J2H0 117 aa6.99□□□□□ -1.29
HMGCLL1-204ENST00000370852 A0A0U1RRA0 63 aa6.99□□□□□ -1.29
HMGCLL1-204ENST00000370852 LY6HO94772 140 aa6.99□□□□□ -1.29
HMGCLL1-204ENST00000370852 NXPH4O95158 308 aa6.99□□□□□ -1.29
HMGCLL1-204ENST00000370852 SDIM1Q6ZPB5 146 aa6.99□□□□□ -1.29
HMGCLL1-204ENST00000370852 DPH3Q96FX2 82 aa6.99□□□□□ -1.29
HMGCLL1-204ENST00000370852 TMEM141Q96I45 108 aa6.99□□□□□ -1.29
HMGCLL1-204ENST00000370852 C16orf92Q96LL3 132 aa6.99□□□□□ -1.29
HMGCLL1-204ENST00000370852 FAM19A4Q96LR4 140 aa6.99□□□□□ -1.29
HMGCLL1-204ENST00000370852 TIMM17AQ99595 171 aa6.99□□□□□ -1.29
HMGCLL1-204ENST00000370852 A0A1B0GX51 115 aa6.99□□□□□ -1.29
HMGCLL1-204ENST00000370852 WIPF1O43516 503 aa6.99□□□□□ -1.29
HMGCLL1-204ENST00000370852 ECSCRQ19T08 205 aa6.99□□□□□ -1.29
HMGCLL1-204ENST00000370852 CITED2Q99967 270 aaPredicted RBP6.99□□□□□ -1.29
HMGCLL1-204ENST00000370852 SPTBN2O15020 2390 aa6.99□□□□□ -1.29
HMGCLL1-204ENST00000370852 A0A087WVE0 104 aa6.98□□□□□ -1.29
HMGCLL1-204ENST00000370852 MBD3L4A6NDZ8 208 aaPredicted RBP6.98□□□□□ -1.29
HMGCLL1-204ENST00000370852 MBD3L3A6NE82 208 aaPredicted RBP6.98□□□□□ -1.29
HMGCLL1-204ENST00000370852 MBD3L5A6NJ08 208 aaPredicted RBP6.98□□□□□ -1.29
HMGCLL1-204ENST00000370852 F5H768 121 aa6.98□□□□□ -1.29
HMGCLL1-204ENST00000370852 M0R1W7 72 aa6.98□□□□□ -1.29
HMGCLL1-204ENST00000370852 DAZ2Q13117 558 aaKnown RBP6.98□□□□□ -1.29
HMGCLL1-204ENST00000370852 Q5XG85 94 aa6.98□□□□□ -1.29
HMGCLL1-204ENST00000370852 DAZ4Q86SG3 579 aaKnown RBP6.98□□□□□ -1.29
HMGCLL1-204ENST00000370852 Q8N2B8 174 aa6.98□□□□□ -1.29
HMGCLL1-204ENST00000370852 MBD3L2Q8NHZ7 208 aaPredicted RBP6.98□□□□□ -1.29
HMGCLL1-204ENST00000370852 LINC00477Q96M19 166 aa6.98□□□□□ -1.29
HMGCLL1-204ENST00000370852 CCDC140Q96MF4 163 aa6.98□□□□□ -1.29
HMGCLL1-204ENST00000370852 DAZ1Q9NQZ3 744 aaKnown RBP6.98□□□□□ -1.29
HMGCLL1-204ENST00000370852 DAZ3Q9NR90 486 aaKnown RBP6.98□□□□□ -1.29
HMGCLL1-204ENST00000370852 G3V318 75 aa6.98□□□□□ -1.29
HMGCLL1-204ENST00000370852 TMEM219Q86XT9 240 aa6.98□□□□□ -1.29
HMGCLL1-204ENST00000370852 FAM104AQ969W3 186 aa6.98□□□□□ -1.29
HMGCLL1-204ENST00000370852 VCYO14598 125 aa6.97□□□□□ -1.29
HMGCLL1-204ENST00000370852 COX6CP09669 75 aa6.97□□□□□ -1.29
HMGCLL1-204ENST00000370852 RPL11P62913 178 aaKnown RBP6.97□□□□□ -1.29
HMGCLL1-204ENST00000370852 C9orf129Q5T035 196 aaKnown RBP6.97□□□□□ -1.29
HMGCLL1-204ENST00000370852 C5orf38Q86SI9 138 aa6.97□□□□□ -1.29
HMGCLL1-204ENST00000370852 LINC00643Q86TS7 51 aa6.97□□□□□ -1.29
HMGCLL1-204ENST00000370852 TMEM61Q8N0U2 210 aa6.97□□□□□ -1.29
HMGCLL1-204ENST00000370852 NPBQ8NG41 125 aa6.97□□□□□ -1.29
HMGCLL1-204ENST00000370852 RNASE6Q93091 150 aaKnown RBP6.97□□□□□ -1.29
HMGCLL1-204ENST00000370852 TIMM21Q9BVV7 248 aa6.97□□□□□ -1.29
HMGCLL1-204ENST00000370852 KAAG1Q9UBP8 84 aa6.97□□□□□ -1.29
HMGCLL1-204ENST00000370852 IGLV4-3A0A075B6K6 122 aa6.97□□□□□ -1.29
HMGCLL1-204ENST00000370852 IGKV3D-7A0A0C4DH55 119 aa6.97□□□□□ -1.29
HMGCLL1-204ENST00000370852 CRYGAP11844 174 aa6.97□□□□□ -1.29
HMGCLL1-204ENST00000370852 TIRAPP58753 221 aa6.97□□□□□ -1.29
HMGCLL1-204ENST00000370852 OR13C6PQ8NH95 151 aa6.97□□□□□ -1.29
HMGCLL1-204ENST00000370852 IMUPQ9GZP8 106 aa6.97□□□□□ -1.29
HMGCLL1-204ENST00000370852 APC2O95996 2303 aa6.97□□□□□ -1.29
HMGCLL1-204ENST00000370852 COL12A1Q99715 3063 aa6.97□□□□□ -1.29
HMGCLL1-204ENST00000370852 IGHV7-81A0A0B4J1V7 117 aa6.96□□□□□ -1.3
HMGCLL1-204ENST00000370852 KLRB1Q12918 225 aa6.96□□□□□ -1.3
HMGCLL1-204ENST00000370852 ASCL5Q7RTU5 278 aa6.96□□□□□ -1.3
HMGCLL1-204ENST00000370852 NUP37Q8NFH4 326 aa6.96□□□□□ -1.3
HMGCLL1-204ENST00000370852 TRAV21A0A0B4J279 112 aa6.96□□□□□ -1.3
HMGCLL1-204ENST00000370852 ITLN2Q8WWU7 325 aaPredicted RBP6.96□□□□□ -1.3
HMGCLL1-204ENST00000370852 ZNF625Q96I27 306 aaPredicted RBP6.96□□□□□ -1.3
HMGCLL1-204ENST00000370852 FAM218AQ96MZ4 157 aa6.96□□□□□ -1.3
HMGCLL1-204ENST00000370852 DYNLRB1Q9NP97 96 aa6.96□□□□□ -1.3
HMGCLL1-204ENST00000370852 NDUFA12Q9UI09 145 aa6.96□□□□□ -1.3
HMGCLL1-204ENST00000370852 VPS13CQ709C8 3753 aa6.95□□□□□ -1.3
HMGCLL1-204ENST00000370852 IGHV4OR15-8A0A075B7B6 117 aa6.95□□□□□ -1.3
HMGCLL1-204ENST00000370852 A0A087WW49 117 aa6.95□□□□□ -1.3
HMGCLL1-204ENST00000370852 TRACP01848 142 aa6.95□□□□□ -1.3
HMGCLL1-204ENST00000370852 MIAQ16674 131 aa6.95□□□□□ -1.3
HMGCLL1-204ENST00000370852 C10orf105Q8TEF2 133 aa6.95□□□□□ -1.3
HMGCLL1-204ENST00000370852 RNF5Q99942 180 aa6.95□□□□□ -1.3
HMGCLL1-204ENST00000370852 Q9HAA7 133 aa6.95□□□□□ -1.3
HMGCLL1-204ENST00000370852 DPM3Q9P2X0 92 aa6.95□□□□□ -1.3
HMGCLL1-204ENST00000370852 Q9UF83 564 aa6.95□□□□□ -1.3
HMGCLL1-204ENST00000370852 CSMD2Q7Z408 3487 aa6.95□□□□□ -1.3
HMGCLL1-204ENST00000370852 PTPRZ1P23471 2315 aaPredicted RBP6.95□□□□□ -1.3
HMGCLL1-204ENST00000370852 IGHV3OR16-10A0A075B7F0 116 aa6.94□□□□□ -1.3
HMGCLL1-204ENST00000370852 A0A0J9YX75 114 aa6.94□□□□□ -1.3
HMGCLL1-204ENST00000370852 TRBV27A0A0K0K1C4 114 aa6.94□□□□□ -1.3
HMGCLL1-204ENST00000370852 HOXD3P31249 432 aaPredicted RBP6.94□□□□□ -1.3
HMGCLL1-204ENST00000370852 PTPRQQ9UMZ3 2332 aa6.94□□□□□ -1.3
HMGCLL1-204ENST00000370852 E7EQL1 145 aa6.93□□□□□ -1.3
HMGCLL1-204ENST00000370852 HIST1H4AP62805 103 aaKnown RBP6.93□□□□□ -1.3
HMGCLL1-204ENST00000370852 RPS28P62857 69 aaKnown RBP6.93□□□□□ -1.3
HMGCLL1-204ENST00000370852 UNQ9165/PRO28630Q6UXU0 137 aa6.93□□□□□ -1.3
HMGCLL1-204ENST00000370852 UPK3BQ9BT76 320 aa6.93□□□□□ -1.3
HMGCLL1-204ENST00000370852 ATP6V0E1O15342 81 aa6.93□□□□□ -1.3
HMGCLL1-204ENST00000370852 TRBV12-3P01733 135 aa6.93□□□□□ -1.3
HMGCLL1-204ENST00000370852 BAALC-AS2P0C853 105 aa6.93□□□□□ -1.3
HMGCLL1-204ENST00000370852 EDN2P20800 178 aa6.93□□□□□ -1.3
HMGCLL1-204ENST00000370852 SPANXDQ9BXN6 97 aa6.93□□□□□ -1.3
HMGCLL1-204ENST00000370852 SPANXCQ9NY87 97 aa6.93□□□□□ -1.3
HMGCLL1-204ENST00000370852 KLK9Q9UKQ9 250 aa6.93□□□□□ -1.3
HMGCLL1-204ENST00000370852 IGHV3-73A0A0B4J1V6 119 aa6.92□□□□□ -1.3
HMGCLL1-204ENST00000370852 BEAN1Q3B7T3 259 aa6.92□□□□□ -1.3
HMGCLL1-204ENST00000370852 C20orf203Q8NBC4 194 aa6.92□□□□□ -1.3
HMGCLL1-204ENST00000370852 ARRDC1-AS1Q9H2J1 176 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms