RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 A0A0J9YY99 117 aa13.07□□□□□ -0.32
PTP4A1-201ENST00000370651 MT-ATP8P03928 68 aa13.07□□□□□ -0.32
PTP4A1-201ENST00000370651 IGKV2D-26A0A0A0MRZ7 120 aa13.07□□□□□ -0.32
PTP4A1-201ENST00000370651 LECT2O14960 151 aa13.07□□□□□ -0.32
PTP4A1-201ENST00000370651 hADV29S1A0JD25 119 aa13.07□□□□□ -0.32
PTP4A1-201ENST00000370651 IGF2-ASQ6U949 168 aa13.07□□□□□ -0.32
PTP4A1-201ENST00000370651 GPHB5Q86YW7 130 aa13.07□□□□□ -0.32
PTP4A1-201ENST00000370651 CCL24O00175 119 aa13.06□□□□□ -0.32
PTP4A1-201ENST00000370651 TMEM131Q92545 1883 aa13.06□□□□□ -0.32
PTP4A1-201ENST00000370651 DEFB121Q5J5C9 76 aa13.05□□□□□ -0.32
PTP4A1-201ENST00000370651 NEXN-AS1Q8NBZ9 246 aa13.05□□□□□ -0.32
PTP4A1-201ENST00000370651 C2orf16Q68DN1 1984 aa13.05□□□□□ -0.32
PTP4A1-201ENST00000370651 MYCNOSP40205 109 aa13.05□□□□□ -0.32
PTP4A1-201ENST00000370651 CITED2Q99967 270 aaPredicted RBP13.05□□□□□ -0.32
PTP4A1-201ENST00000370651 C16orf74Q96GX8 76 aa13.05□□□□□ -0.32
PTP4A1-201ENST00000370651 IGHV4OR15-8A0A075B7B6 117 aa13.04□□□□□ -0.32
PTP4A1-201ENST00000370651 A0A087WW49 117 aa13.04□□□□□ -0.32
PTP4A1-201ENST00000370651 MIAQ16674 131 aa13.04□□□□□ -0.32
PTP4A1-201ENST00000370651 IGHG2P01859 326 aa13.04□□□□□ -0.32
PTP4A1-201ENST00000370651 PSMB8P28062 276 aa13.04□□□□□ -0.32
PTP4A1-201ENST00000370651 CRIP1P50238 77 aa13.04□□□□□ -0.32
PTP4A1-201ENST00000370651 LINC00643Q86TS7 51 aa13.04□□□□□ -0.32
PTP4A1-201ENST00000370651 JMJD7-PLA2G4BH0Y9G9 81 aa13.04□□□□□ -0.32
PTP4A1-201ENST00000370651 COL4A4P53420 1690 aaPredicted RBP13.04□□□□□ -0.32
PTP4A1-201ENST00000370651 IGHV4-30-2A0A087WSY4 118 aa13.04□□□□□ -0.32
PTP4A1-201ENST00000370651 A0A0J9YXY3 114 aa13.04□□□□□ -0.32
PTP4A1-201ENST00000370651 TRBV12-3P01733 135 aa13.04□□□□□ -0.32
PTP4A1-201ENST00000370651 GYPEP15421 78 aa13.04□□□□□ -0.32
PTP4A1-201ENST00000370651 MAPKAPK5-AS1Q8N8E1 139 aa13.04□□□□□ -0.32
PTP4A1-201ENST00000370651 CCDC140Q96MF4 163 aa13.04□□□□□ -0.32
PTP4A1-201ENST00000370651 SIRPDQ9H106 197 aa13.04□□□□□ -0.32
PTP4A1-201ENST00000370651 A0A0J9YX75 114 aa13.03□□□□□ -0.32
PTP4A1-201ENST00000370651 CRYGBP07316 175 aa13.03□□□□□ -0.32
PTP4A1-201ENST00000370651 COX7A2LO14548 114 aa13.03□□□□□ -0.32
PTP4A1-201ENST00000370651 NFE4Q86UQ8 179 aa13.03□□□□□ -0.32
PTP4A1-201ENST00000370651 TMEM61Q8N0U2 210 aa13.03□□□□□ -0.32
PTP4A1-201ENST00000370651 MIR7-3HGQ8N6C7 128 aa13.03□□□□□ -0.32
PTP4A1-201ENST00000370651 NDUFV3P56181 108 aaKnown RBP13.02□□□□□ -0.32
PTP4A1-201ENST00000370651 U3KQK5 164 aa13.02□□□□□ -0.32
PTP4A1-201ENST00000370651 IGLV10-54A0A075B6I4 117 aa13.02□□□□□ -0.32
PTP4A1-201ENST00000370651 CEMP1Q6PRD7 247 aaPredicted RBP13.02□□□□□ -0.32
PTP4A1-201ENST00000370651 C2orf91Q6ZV80 131 aa13.02□□□□□ -0.33
PTP4A1-201ENST00000370651 CSPG4Q6UVK1 2322 aa13.02□□□□□ -0.33
PTP4A1-201ENST00000370651 IGHV4-4A0A075B6R2 117 aa13.01□□□□□ -0.33
PTP4A1-201ENST00000370651 DEFB105AQ8NG35 78 aa13.01□□□□□ -0.33
PTP4A1-201ENST00000370651 TEX49A0A1B0GTD5 131 aa13□□□□□ -0.33
PTP4A1-201ENST00000370651 C2CD3Q4AC94 2353 aa13□□□□□ -0.33
PTP4A1-201ENST00000370651 C10orf105Q8TEF2 133 aa13□□□□□ -0.33
PTP4A1-201ENST00000370651 ATP5G1P05496 136 aa12.99□□□□□ -0.33
PTP4A1-201ENST00000370651 FUSP35637 526 aaKnown RBP eCLIP12.99□□□□□ -0.331e-7■□□□□ 9.6
PTP4A1-201ENST00000370651 RNF185Q96GF1 192 aa12.99□□□□□ -0.33
PTP4A1-201ENST00000370651 TNRC6BQ9UPQ9 1833 aaKnown RBP12.99□□□□□ -0.33
PTP4A1-201ENST00000370651 ODF3BA8MYP8 253 aa12.99□□□□□ -0.33
PTP4A1-201ENST00000370651 ADORA2A-AS1P86434 159 aa12.99□□□□□ -0.33
PTP4A1-201ENST00000370651 Q9HAA7 133 aa12.99□□□□□ -0.33
PTP4A1-201ENST00000370651 IGLV2-11P01706 119 aa12.98□□□□□ -0.33
PTP4A1-201ENST00000370651 LINC00310P59036 64 aa12.98□□□□□ -0.33
PTP4A1-201ENST00000370651 PRB1P04280 392 aa12.98□□□□□ -0.33
PTP4A1-201ENST00000370651 RMI2Q96E14 147 aa12.98□□□□□ -0.33
PTP4A1-201ENST00000370651 IGKV2D-24A0A075B6R9 120 aa12.97□□□□□ -0.33
PTP4A1-201ENST00000370651 MRPL23Q16540 153 aaKnown RBP12.97□□□□□ -0.33
PTP4A1-201ENST00000370651 TMEM89A2RUT3 159 aa12.97□□□□□ -0.33
PTP4A1-201ENST00000370651 CAMK2N2Q96S95 79 aa12.97□□□□□ -0.33
PTP4A1-201ENST00000370651 KIAA1549Q9HCM3 1950 aa12.97□□□□□ -0.33
PTP4A1-201ENST00000370651 C1orf43Q9BWL3 253 aa12.97□□□□□ -0.33
PTP4A1-201ENST00000370651 LINC01548A6NM66 108 aa12.96□□□□□ -0.33
PTP4A1-201ENST00000370651 H3BQ85 93 aa12.95□□□□□ -0.34
PTP4A1-201ENST00000370651 ZNF22P17026 224 aaPredicted RBP12.95□□□□□ -0.34
PTP4A1-201ENST00000370651 C14orf132Q9NPU4 83 aa12.95□□□□□ -0.34
PTP4A1-201ENST00000370651 MUC6Q6W4X9 2439 aa12.95□□□□□ -0.34
PTP4A1-201ENST00000370651 IGF1P05019 195 aa12.95□□□□□ -0.34
PTP4A1-201ENST00000370651 HCFC1P51610 2035 aa12.94□□□□□ -0.34
PTP4A1-201ENST00000370651 TRBV10-1A0A0K0K1A3 114 aa12.94□□□□□ -0.34
PTP4A1-201ENST00000370651 P0DMU3 169 aa12.94□□□□□ -0.34
PTP4A1-201ENST00000370651 FAM231AP0DMU4 169 aa12.94□□□□□ -0.34
PTP4A1-201ENST00000370651 FAM231CP0DMU5 169 aa12.94□□□□□ -0.34
PTP4A1-201ENST00000370651 NREPQ16612 68 aa12.94□□□□□ -0.34
PTP4A1-201ENST00000370651 FBXL19-AS1Q494R0 122 aa12.94□□□□□ -0.34
PTP4A1-201ENST00000370651 HIST2H2BDQ6DRA6 164 aa12.94□□□□□ -0.34
PTP4A1-201ENST00000370651 TMEM223A0PJW6 202 aa12.94□□□□□ -0.34
PTP4A1-201ENST00000370651 TMEM256-PLSCR3K7ERE1 68 aa12.93□□□□□ -0.34
PTP4A1-201ENST00000370651 NCR3O14931 201 aa12.93□□□□□ -0.34
PTP4A1-201ENST00000370651 ETDCA0A1B0GVM5 59 aa12.93□□□□□ -0.34
PTP4A1-201ENST00000370651 CXCL5P42830 114 aa12.93□□□□□ -0.34
PTP4A1-201ENST00000370651 DAZAP2Q15038 168 aaPredicted RBP12.93□□□□□ -0.34
PTP4A1-201ENST00000370651 C22orf34Q6ZV56 151 aa12.93□□□□□ -0.34
PTP4A1-201ENST00000370651 HHLA3Q9XRX5 114 aa12.93□□□□□ -0.34
PTP4A1-201ENST00000370651 A6NDX4 124 aa12.92□□□□□ -0.34
PTP4A1-201ENST00000370651 Q8N976 141 aa12.92□□□□□ -0.34
PTP4A1-201ENST00000370651 SMAD5-AS1Q9Y6J3 95 aa12.92□□□□□ -0.34
PTP4A1-201ENST00000370651 CACNA1AO00555 2505 aa12.92□□□□□ -0.34
PTP4A1-201ENST00000370651 NOTCH2Q04721 2471 aa12.92□□□□□ -0.34
PTP4A1-201ENST00000370651 LTBP2Q14767 1821 aa12.92□□□□□ -0.34
PTP4A1-201ENST00000370651 SRCAPQ6ZRS2 3230 aa12.92□□□□□ -0.34
PTP4A1-201ENST00000370651 IGHV3-33P01772 117 aa12.92□□□□□ -0.34
PTP4A1-201ENST00000370651 ODF3Q96PU9 254 aa12.92□□□□□ -0.34
PTP4A1-201ENST00000370651 ZFAND3Q9H8U3 227 aa12.92□□□□□ -0.34
PTP4A1-201ENST00000370651 TECTAO75443 2155 aa12.92□□□□□ -0.34
PTP4A1-201ENST00000370651 NUP210LQ5VU65 1888 aa12.92□□□□□ -0.34
PTP4A1-201ENST00000370651 TANC2Q9HCD6 1990 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms