RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 FAM231AP0DMU4 169 aa12.04□□□□□ -0.48
PHGDH-202ENST00000369409 FAM231CP0DMU5 169 aa12.04□□□□□ -0.48
PHGDH-202ENST00000369409 LAGE3Q14657 143 aa12.04□□□□□ -0.48
PHGDH-202ENST00000369409 OVOL2Q9BRP0 275 aa12.04□□□□□ -0.48
PHGDH-202ENST00000369409 EDA2RQ9HAV5 297 aa12.04□□□□□ -0.48
PHGDH-202ENST00000369409 TRBV6-5A0A0K0K1A5 114 aa12.03□□□□□ -0.48
PHGDH-202ENST00000369409 GAGE12BA1L429 117 aa12.03□□□□□ -0.48
PHGDH-202ENST00000369409 SDHAF1A6NFY7 115 aa12.03□□□□□ -0.48
PHGDH-202ENST00000369409 GAGE7O76087 117 aa12.03□□□□□ -0.48
PHGDH-202ENST00000369409 IGHV3-53P01767 116 aa12.03□□□□□ -0.48
PHGDH-202ENST00000369409 GAGE12FP0CL80 117 aa12.03□□□□□ -0.48
PHGDH-202ENST00000369409 GAGE12GP0CL81 117 aa12.03□□□□□ -0.48
PHGDH-202ENST00000369409 GAGE12IP0CL82 117 aa12.03□□□□□ -0.48
PHGDH-202ENST00000369409 Q6ZSN1 163 aa12.03□□□□□ -0.48
PHGDH-202ENST00000369409 HSPB8Q9UJY1 196 aa12.03□□□□□ -0.48
PHGDH-202ENST00000369409 TRAV4A0A0B4J268 109 aa12.02□□□□□ -0.48
PHGDH-202ENST00000369409 FCER1GP30273 86 aa12.02□□□□□ -0.48
PHGDH-202ENST00000369409 DEFA6Q01524 100 aa12.02□□□□□ -0.48
PHGDH-202ENST00000369409 ZFP2Q6ZN57 461 aa12.02□□□□□ -0.48
PHGDH-202ENST00000369409 ZNF479Q96JC4 524 aa12.02□□□□□ -0.48
PHGDH-202ENST00000369409 NBEAL2Q6ZNJ1 2754 aa12.02□□□□□ -0.49
PHGDH-202ENST00000369409 DNAH3Q8TD57 4116 aa12.02□□□□□ -0.49
PHGDH-202ENST00000369409 SMIM9A6NGZ8 99 aa12.02□□□□□ -0.49
PHGDH-202ENST00000369409 BTF3P20290 206 aaKnown RBP12.02□□□□□ -0.49
PHGDH-202ENST00000369409 POLR2KP53803 58 aaKnown RBP12.02□□□□□ -0.49
PHGDH-202ENST00000369409 RPL32P62910 135 aaKnown RBP12.02□□□□□ -0.49
PHGDH-202ENST00000369409 SAMD5Q5TGI4 173 aa12.02□□□□□ -0.49
PHGDH-202ENST00000369409 Q8N976 141 aa12.02□□□□□ -0.49
PHGDH-202ENST00000369409 OR11H2Q8NH07 326 aa12.01□□□□□ -0.49
PHGDH-202ENST00000369409 DEFB104AQ8WTQ1 72 aa12.01□□□□□ -0.49
PHGDH-202ENST00000369409 TRGV2A0A075B6R0 118 aa12□□□□□ -0.49
PHGDH-202ENST00000369409 LBHQ53QV2 105 aaPredicted RBP12□□□□□ -0.49
PHGDH-202ENST00000369409 NUDT3O95989 172 aa12□□□□□ -0.49
PHGDH-202ENST00000369409 ORMDL2Q53FV1 153 aa12□□□□□ -0.49
PHGDH-202ENST00000369409 SPATA12Q7Z6I5 190 aa12□□□□□ -0.49
PHGDH-202ENST00000369409 MAP1LC3CQ9BXW4 147 aa12□□□□□ -0.49
PHGDH-202ENST00000369409 TRBV27A0A0K0K1C4 114 aa11.99□□□□□ -0.49
PHGDH-202ENST00000369409 H0Y8G0 127 aa11.99□□□□□ -0.49
PHGDH-202ENST00000369409 SYS1-DBNDD2H3BUS1 97 aa11.99□□□□□ -0.49
PHGDH-202ENST00000369409 K7EMI3 77 aa11.99□□□□□ -0.49
PHGDH-202ENST00000369409 VCYO14598 125 aa11.99□□□□□ -0.49
PHGDH-202ENST00000369409 C18orf15Q96N68 181 aa11.99□□□□□ -0.49
PHGDH-202ENST00000369409 Q9UF83 564 aa11.99□□□□□ -0.49
PHGDH-202ENST00000369409 RNF183Q96D59 192 aa11.98□□□□□ -0.49
PHGDH-202ENST00000369409 KIR2DL4Q99706 377 aa11.98□□□□□ -0.49
PHGDH-202ENST00000369409 IGHV4-28A0A0C4DH34 117 aa11.97□□□□□ -0.49
PHGDH-202ENST00000369409 A8MZ25 164 aa11.97□□□□□ -0.49
PHGDH-202ENST00000369409 NEXN-AS1Q8NBZ9 246 aa11.97□□□□□ -0.49
PHGDH-202ENST00000369409 DEFB4AO15263 64 aa11.97□□□□□ -0.49
PHGDH-202ENST00000369409 TNFRSF18Q9Y5U5 241 aa11.97□□□□□ -0.49
PHGDH-202ENST00000369409 DEFB130BP0DP73 79 aa11.96□□□□□ -0.49
PHGDH-202ENST00000369409 DEFB130AP0DP74 79 aa11.96□□□□□ -0.49
PHGDH-202ENST00000369409 IFI27L1Q96BM0 104 aa11.96□□□□□ -0.49
PHGDH-202ENST00000369409 K7EQD1 137 aa11.95□□□□□ -0.5
PHGDH-202ENST00000369409 LINC00612Q8N6U2 182 aa11.95□□□□□ -0.5
PHGDH-202ENST00000369409 Q8NAQ8 132 aa11.95□□□□□ -0.5
PHGDH-202ENST00000369409 NOTCH1P46531 2555 aa11.95□□□□□ -0.5
PHGDH-202ENST00000369409 I3L3M4 83 aa11.95□□□□□ -0.5
PHGDH-202ENST00000369409 MIFP14174 115 aa11.95□□□□□ -0.5
PHGDH-202ENST00000369409 FAM222AQ5U5X8 452 aa11.95□□□□□ -0.5
PHGDH-202ENST00000369409 TSHBP01222 138 aa11.94□□□□□ -0.5
PHGDH-202ENST00000369409 PET117Q6UWS5 81 aa11.94□□□□□ -0.5
PHGDH-202ENST00000369409 C2orf66Q6UXQ4 117 aa11.94□□□□□ -0.5
PHGDH-202ENST00000369409 TEX43Q6ZNM6 134 aa11.94□□□□□ -0.5
PHGDH-202ENST00000369409 DNAJC30Q96LL9 226 aa11.94□□□□□ -0.5
PHGDH-202ENST00000369409 C20orf202A1L168 122 aa11.93□□□□□ -0.5
PHGDH-202ENST00000369409 ATOH7Q8N100 152 aa11.93□□□□□ -0.5
PHGDH-202ENST00000369409 SLC25A29Q8N8R3 303 aa11.93□□□□□ -0.5
PHGDH-202ENST00000369409 TOMM6Q96B49 74 aa11.93□□□□□ -0.5
PHGDH-202ENST00000369409 TRGV4A0A0C4DH28 118 aa11.93□□□□□ -0.5
PHGDH-202ENST00000369409 LYRM9A8MSI8 78 aa11.93□□□□□ -0.5
PHGDH-202ENST00000369409 RETNQ9HD89 108 aa11.93□□□□□ -0.5
PHGDH-202ENST00000369409 CIDEAO60543 219 aa11.92□□□□□ -0.5
PHGDH-202ENST00000369409 ATP5LO75964 103 aa11.92□□□□□ -0.5
PHGDH-202ENST00000369409 PRB2P02812 416 aaPredicted RBP11.92□□□□□ -0.5
PHGDH-202ENST00000369409 RIPPLY3P57055 190 aa11.92□□□□□ -0.5
PHGDH-202ENST00000369409 PMCHL2Q9BQD1 86 aa11.92□□□□□ -0.5
PHGDH-202ENST00000369409 TP53TG1Q9Y2A0 90 aa11.92□□□□□ -0.5
PHGDH-202ENST00000369409 RHOHQ15669 191 aa11.91□□□□□ -0.5
PHGDH-202ENST00000369409 LINC01545Q5VT33 79 aa11.91□□□□□ -0.5
PHGDH-202ENST00000369409 ZNRF2Q8NHG8 242 aa11.91□□□□□ -0.5
PHGDH-202ENST00000369409 PHLDA1Q8WV24 401 aaPredicted RBP11.91□□□□□ -0.5
PHGDH-202ENST00000369409 DKK2Q9UBU2 259 aa11.91□□□□□ -0.5
PHGDH-202ENST00000369409 CYSLTR1Q9Y271 337 aa11.91□□□□□ -0.5
PHGDH-202ENST00000369409 IGHV3-38A0A0C4DH36 116 aa11.91□□□□□ -0.5
PHGDH-202ENST00000369409 TRBV10-1A0A0K0K1A3 114 aa11.91□□□□□ -0.5
PHGDH-202ENST00000369409 RPL39P62891 51 aaKnown RBP11.91□□□□□ -0.5
PHGDH-202ENST00000369409 FHL2Q14192 279 aa11.91□□□□□ -0.5
PHGDH-202ENST00000369409 SCGB3A1Q96QR1 104 aa11.91□□□□□ -0.5
PHGDH-202ENST00000369409 NBEAL1Q6ZS30 2694 aa11.9□□□□□ -0.5
PHGDH-202ENST00000369409 RPL36AP83881 106 aaKnown RBP11.9□□□□□ -0.5
PHGDH-202ENST00000369409 RPL36ALQ969Q0 106 aaKnown RBP11.9□□□□□ -0.5
PHGDH-202ENST00000369409 VAMP8Q9BV40 100 aa11.9□□□□□ -0.5
PHGDH-202ENST00000369409 CELA1Q9UNI1 258 aa11.9□□□□□ -0.5
PHGDH-202ENST00000369409 TRBV7-3A0A075B6L6 115 aa11.89□□□□□ -0.51
PHGDH-202ENST00000369409 PAM16Q9Y3D7 125 aa11.89□□□□□ -0.51
PHGDH-202ENST00000369409 TRBV6-4A0A1B0GX49 114 aa11.89□□□□□ -0.51
PHGDH-202ENST00000369409 GAGE12JA6NER3 117 aa11.89□□□□□ -0.51
PHGDH-202ENST00000369409 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.89□□□□□ -0.51
PHGDH-202ENST00000369409 PRSS1P07477 247 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms