RNA–Protein interactions for RNA: ENST00000369071.4

LINC01561-201, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

BASIC

Gene LINC01561, Length 2,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-201ENST00000369071 ZNF56Q15929 161 aa9.31□□□□□ -0.92
LINC01561-201ENST00000369071 TMEM263Q8WUH6 116 aaKnown RBP9.31□□□□□ -0.92
LINC01561-201ENST00000369071 VCX2Q9H322 139 aa9.31□□□□□ -0.92
LINC01561-201ENST00000369071 TRAV12-2A0A075B6T6 113 aa9.3□□□□□ -0.92
LINC01561-201ENST00000369071 TGFAP01135 160 aa9.3□□□□□ -0.92
LINC01561-201ENST00000369071 IGHV3-33P01772 117 aa9.3□□□□□ -0.92
LINC01561-201ENST00000369071 SCGB1C2P0DMR2 95 aa9.3□□□□□ -0.92
LINC01561-201ENST00000369071 ZNF22P17026 224 aaPredicted RBP9.3□□□□□ -0.92
LINC01561-201ENST00000369071 TRPT1Q86TN4 253 aaKnown RBP9.3□□□□□ -0.92
LINC01561-201ENST00000369071 Q8N1Y9 231 aa9.3□□□□□ -0.92
LINC01561-201ENST00000369071 ANKRD29Q8N6D5 301 aa9.3□□□□□ -0.92
LINC01561-201ENST00000369071 C20orf203Q8NBC4 194 aa9.3□□□□□ -0.92
LINC01561-201ENST00000369071 SPTBN1Q01082 2364 aaKnown RBP9.3□□□□□ -0.92
LINC01561-201ENST00000369071 A0A0J9YX75 114 aa9.3□□□□□ -0.92
LINC01561-201ENST00000369071 RHODO00212 210 aa9.3□□□□□ -0.92
LINC01561-201ENST00000369071 A0A0B4J2C4 111 aa9.29□□□□□ -0.92
LINC01561-201ENST00000369071 M0QXV9 152 aa9.29□□□□□ -0.92
LINC01561-201ENST00000369071 ZNF688P0C7X2 276 aa9.29□□□□□ -0.92
LINC01561-201ENST00000369071 RAX2Q96IS3 184 aa9.29□□□□□ -0.92
LINC01561-201ENST00000369071 IGHV1OR15-1A0A075B7D0 117 aa9.29□□□□□ -0.92
LINC01561-201ENST00000369071 MUSTN1Q8IVN3 82 aa9.29□□□□□ -0.92
LINC01561-201ENST00000369071 PIMREGQ9BSJ6 248 aa9.29□□□□□ -0.92
LINC01561-201ENST00000369071 VPS13CQ709C8 3753 aa9.28□□□□□ -0.92
LINC01561-201ENST00000369071 CELSR1Q9NYQ6 3014 aa9.28□□□□□ -0.92
LINC01561-201ENST00000369071 IGLV4-3A0A075B6K6 122 aa9.28□□□□□ -0.92
LINC01561-201ENST00000369071 I3L3M4 83 aa9.28□□□□□ -0.92
LINC01561-201ENST00000369071 IGKV3-20P01619 116 aa9.28□□□□□ -0.92
LINC01561-201ENST00000369071 GEMIN7Q9H840 131 aaKnown RBP9.28□□□□□ -0.92
LINC01561-201ENST00000369071 IGHV3-64A0A075B6Q5 118 aa9.27□□□□□ -0.92
LINC01561-201ENST00000369071 TRAV2A0A0B4J234 112 aa9.27□□□□□ -0.92
LINC01561-201ENST00000369071 A0A0J9YXV3 536 aa9.27□□□□□ -0.92
LINC01561-201ENST00000369071 M0R2P5 195 aa9.27□□□□□ -0.92
LINC01561-201ENST00000369071 SLC25A20O43772 301 aa9.27□□□□□ -0.92
LINC01561-201ENST00000369071 C10orf105Q8TEF2 133 aa9.27□□□□□ -0.92
LINC01561-201ENST00000369071 ERG28Q9UKR5 140 aa9.27□□□□□ -0.92
LINC01561-201ENST00000369071 UNC79Q9P2D8 2635 aa9.27□□□□□ -0.93
LINC01561-201ENST00000369071 K7EQG2 157 aa9.27□□□□□ -0.93
LINC01561-201ENST00000369071 PSMB8P28062 276 aa9.27□□□□□ -0.93
LINC01561-201ENST00000369071 ZNF580Q9UK33 172 aa9.27□□□□□ -0.93
LINC01561-201ENST00000369071 SPINK13Q1W4C9 94 aa9.26□□□□□ -0.93
LINC01561-201ENST00000369071 A0A0J9YXY3 114 aa9.26□□□□□ -0.93
LINC01561-201ENST00000369071 CYSRT1A8MQ03 144 aa9.26□□□□□ -0.93
LINC01561-201ENST00000369071 C9JAW5 83 aa9.26□□□□□ -0.93
LINC01561-201ENST00000369071 SNRPD3P62318 126 aaKnown RBP9.26□□□□□ -0.93
LINC01561-201ENST00000369071 FAM104AQ969W3 186 aa9.26□□□□□ -0.93
LINC01561-201ENST00000369071 IGF2RP11717 2491 aa9.26□□□□□ -0.93
LINC01561-201ENST00000369071 HIVEP3Q5T1R4 2406 aa9.25□□□□□ -0.93
LINC01561-201ENST00000369071 TRAV26-1A0A087WT03 109 aa9.25□□□□□ -0.93
LINC01561-201ENST00000369071 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.25□□□□□ -0.93
LINC01561-201ENST00000369071 COL6A6A6NMZ7 2263 aa9.25□□□□□ -0.93
LINC01561-201ENST00000369071 TMEM262E9PQX1 116 aa9.24□□□□□ -0.93
LINC01561-201ENST00000369071 ELANEP08246 267 aa9.24□□□□□ -0.93
LINC01561-201ENST00000369071 RNF152Q8N8N0 203 aa9.24□□□□□ -0.93
LINC01561-201ENST00000369071 LITAFQ99732 161 aa9.24□□□□□ -0.93
LINC01561-201ENST00000369071 AKAP6Q13023 2319 aa9.24□□□□□ -0.93
LINC01561-201ENST00000369071 H7C2G1 150 aa9.24□□□□□ -0.93
LINC01561-201ENST00000369071 IGHV3-30-3P0DP02 117 aa9.24□□□□□ -0.93
LINC01561-201ENST00000369071 LY6DQ14210 128 aa9.24□□□□□ -0.93
LINC01561-201ENST00000369071 C10orf99Q6UWK7 81 aa9.24□□□□□ -0.93
LINC01561-201ENST00000369071 EDA2RQ9HAV5 297 aa9.24□□□□□ -0.93
LINC01561-201ENST00000369071 PYGO1Q9Y3Y4 419 aa9.24□□□□□ -0.93
LINC01561-201ENST00000369071 AVPP01185 164 aa9.23□□□□□ -0.93
LINC01561-201ENST00000369071 LINC01600Q96MT4 127 aa9.23□□□□□ -0.93
LINC01561-201ENST00000369071 CLUHP3Q96NS8 147 aa9.23□□□□□ -0.93
LINC01561-201ENST00000369071 IGHV4-30-2A0A087WSY4 118 aa9.23□□□□□ -0.93
LINC01561-201ENST00000369071 MSMBP08118 114 aa9.23□□□□□ -0.93
LINC01561-201ENST00000369071 MRPS36P82909 103 aaKnown RBP9.23□□□□□ -0.93
LINC01561-201ENST00000369071 SPXQ9BT56 116 aa9.23□□□□□ -0.93
LINC01561-201ENST00000369071 TRGV11A0A075B6L2 103 aa9.22□□□□□ -0.93
LINC01561-201ENST00000369071 ATXN8Q156A1 80 aa9.22□□□□□ -0.93
LINC01561-201ENST00000369071 LINC01620Q4KN68 170 aa9.22□□□□□ -0.93
LINC01561-201ENST00000369071 HELZ2Q9BYK8 2649 aaKnown RBP9.22□□□□□ -0.93
LINC01561-201ENST00000369071 SPTAN1Q13813 2472 aaKnown RBP9.22□□□□□ -0.93
LINC01561-201ENST00000369071 TRBV30A0A0K0K1B3 111 aa9.22□□□□□ -0.93
LINC01561-201ENST00000369071 CCL19Q99731 98 aa9.22□□□□□ -0.93
LINC01561-201ENST00000369071 CITED1Q99966 193 aa9.22□□□□□ -0.93
LINC01561-201ENST00000369071 TIMM21Q9BVV7 248 aa9.22□□□□□ -0.93
LINC01561-201ENST00000369071 ADARB2-AS1A8MUL3 147 aa9.21□□□□□ -0.94
LINC01561-201ENST00000369071 RBMY1A1P0DJD3 496 aaKnown RBP9.21□□□□□ -0.94
LINC01561-201ENST00000369071 RBMY1CP0DJD4 496 aa9.21□□□□□ -0.94
LINC01561-201ENST00000369071 CD28P10747 220 aa9.21□□□□□ -0.94
LINC01561-201ENST00000369071 RBMY1FQ15415 496 aaKnown RBP9.21□□□□□ -0.94
LINC01561-201ENST00000369071 Q1RN00 199 aa9.21□□□□□ -0.94
LINC01561-201ENST00000369071 NAV2Q8IVL1 2488 aa9.2□□□□□ -0.94
LINC01561-201ENST00000369071 TMEM89A2RUT3 159 aa9.2□□□□□ -0.94
LINC01561-201ENST00000369071 TRIAP1O43715 76 aa9.2□□□□□ -0.94
LINC01561-201ENST00000369071 ITPR1Q14643 2758 aa9.2□□□□□ -0.94
LINC01561-201ENST00000369071 TRAV8-3A0A0A6YYJ7 113 aa9.2□□□□□ -0.94
LINC01561-201ENST00000369071 IGHV1-58A0A0C4DH39 117 aa9.2□□□□□ -0.94
LINC01561-201ENST00000369071 GNLYP22749 145 aa9.2□□□□□ -0.94
LINC01561-201ENST00000369071 SYNJ2BPP57105 145 aa9.2□□□□□ -0.94
LINC01561-201ENST00000369071 PROK1P58294 105 aa9.2□□□□□ -0.94
LINC01561-201ENST00000369071 ADAMTSL4-AS1Q5T5F5 129 aa9.2□□□□□ -0.94
LINC01561-201ENST00000369071 CEMP1Q6PRD7 247 aaPredicted RBP9.2□□□□□ -0.94
LINC01561-201ENST00000369071 NTN5Q8WTR8 489 aaPredicted RBP9.2□□□□□ -0.94
LINC01561-201ENST00000369071 SPANXDQ9BXN6 97 aa9.2□□□□□ -0.94
LINC01561-201ENST00000369071 SPANXCQ9NY87 97 aa9.2□□□□□ -0.94
LINC01561-201ENST00000369071 IGHV3-73A0A0B4J1V6 119 aa9.19□□□□□ -0.94
LINC01561-201ENST00000369071 IGHV4-59P01825 116 aa9.19□□□□□ -0.94
LINC01561-201ENST00000369071 ZFAND6Q6FIF0 208 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms