RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 OXLD1Q5BKU9 147 aa8□□□□□ -1.13
TPM3-212ENST00000368533 RNF185Q96GF1 192 aa8□□□□□ -1.13
TPM3-212ENST00000368533 M0R381 172 aa8□□□□□ -1.13
TPM3-212ENST00000368533 TMEM158Q8WZ71 300 aa8□□□□□ -1.13
TPM3-212ENST00000368533 IGHV7-4-1A0A0J9YVY3 117 aa7.99□□□□□ -1.13
TPM3-212ENST00000368533 ZNF688P0C7X2 276 aa7.99□□□□□ -1.13
TPM3-212ENST00000368533 LINC01559Q495D7 138 aa7.99□□□□□ -1.13
TPM3-212ENST00000368533 MORN3Q6PF18 240 aaPredicted RBP7.99□□□□□ -1.13
TPM3-212ENST00000368533 TEX29Q8N6K0 151 aa7.99□□□□□ -1.13
TPM3-212ENST00000368533 MRPL35Q9NZE8 188 aaKnown RBP7.99□□□□□ -1.13
TPM3-212ENST00000368533 TRRAPQ9Y4A5 3859 aa7.99□□□□□ -1.13
TPM3-212ENST00000368533 LGALS1P09382 135 aaKnown RBP7.99□□□□□ -1.13
TPM3-212ENST00000368533 ID1P41134 155 aa7.99□□□□□ -1.13
TPM3-212ENST00000368533 KLK9Q2XQG4 91 aa7.99□□□□□ -1.13
TPM3-212ENST00000368533 CFAP126Q5VTH2 177 aa7.99□□□□□ -1.13
TPM3-212ENST00000368533 ZFAND6Q6FIF0 208 aa7.99□□□□□ -1.13
TPM3-212ENST00000368533 COX8CQ7Z4L0 72 aa7.99□□□□□ -1.13
TPM3-212ENST00000368533 HIGD1BQ9P298 99 aa7.99□□□□□ -1.13
TPM3-212ENST00000368533 KLK9Q9UKQ9 250 aa7.99□□□□□ -1.13
TPM3-212ENST00000368533 CITED2Q99967 270 aaPredicted RBP7.98□□□□□ -1.13
TPM3-212ENST00000368533 NXT2Q9NPJ8 142 aaKnown RBP7.98□□□□□ -1.13
TPM3-212ENST00000368533 LINC01549A6NIU2 74 aa7.98□□□□□ -1.13
TPM3-212ENST00000368533 U3KQE9 123 aa7.98□□□□□ -1.13
TPM3-212ENST00000368533 RBAKDNA6NC62 111 aa7.98□□□□□ -1.13
TPM3-212ENST00000368533 ELANEP08246 267 aa7.98□□□□□ -1.13
TPM3-212ENST00000368533 NSUN5P1Q3KNT7 163 aa7.98□□□□□ -1.13
TPM3-212ENST00000368533 ZNF575Q86XF7 245 aa7.98□□□□□ -1.13
TPM3-212ENST00000368533 OR10J6PQ8NGY7 276 aa7.98□□□□□ -1.13
TPM3-212ENST00000368533 LINC01006Q8NI28 216 aa7.98□□□□□ -1.13
TPM3-212ENST00000368533 CRLF1O75462 422 aa7.97□□□□□ -1.13
TPM3-212ENST00000368533 HLA-DRB4P13762 266 aa7.97□□□□□ -1.13
TPM3-212ENST00000368533 DLX4Q92988 240 aaPredicted RBP7.97□□□□□ -1.13
TPM3-212ENST00000368533 HLA-DRB4X5D2U9 266 aa7.97□□□□□ -1.13
TPM3-212ENST00000368533 CYSRT1A8MQ03 144 aa7.97□□□□□ -1.13
TPM3-212ENST00000368533 UBE2E2Q96LR5 201 aa7.97□□□□□ -1.13
TPM3-212ENST00000368533 MGPP08493 103 aa7.96□□□□□ -1.13
TPM3-212ENST00000368533 RNASE4P34096 147 aaKnown RBP7.96□□□□□ -1.13
TPM3-212ENST00000368533 MYOZ3Q8TDC0 251 aa7.96□□□□□ -1.13
TPM3-212ENST00000368533 TRAV4A0A0B4J268 109 aa7.96□□□□□ -1.14
TPM3-212ENST00000368533 PSMG4Q5JS54 123 aa7.96□□□□□ -1.14
TPM3-212ENST00000368533 DPM2O94777 84 aa7.96□□□□□ -1.14
TPM3-212ENST00000368533 PRR9Q5T870 116 aa7.96□□□□□ -1.14
TPM3-212ENST00000368533 DEFB104AQ8WTQ1 72 aa7.96□□□□□ -1.14
TPM3-212ENST00000368533 FAM110AQ9BQ89 295 aa7.96□□□□□ -1.14
TPM3-212ENST00000368533 PHLDA3Q9Y5J5 127 aa7.95□□□□□ -1.14
TPM3-212ENST00000368533 MAST4O15021 2626 aa7.95□□□□□ -1.14
TPM3-212ENST00000368533 Q8N8P6 123 aa7.95□□□□□ -1.14
TPM3-212ENST00000368533 CNFNQ9BYD5 112 aa7.95□□□□□ -1.14
TPM3-212ENST00000368533 FAM159AQ6UWV7 190 aa7.94□□□□□ -1.14
TPM3-212ENST00000368533 C9orf47Q6ZRZ4 202 aa7.94□□□□□ -1.14
TPM3-212ENST00000368533 C14orf178Q8N769 122 aaPredicted RBP7.94□□□□□ -1.14
TPM3-212ENST00000368533 LAGE3Q14657 143 aa7.94□□□□□ -1.14
TPM3-212ENST00000368533 Q8N2B8 174 aa7.94□□□□□ -1.14
TPM3-212ENST00000368533 ZMAT4Q9H898 229 aa7.94□□□□□ -1.14
TPM3-212ENST00000368533 TRBV7-3A0A075B6L6 115 aa7.94□□□□□ -1.14
TPM3-212ENST00000368533 GAGE12JA6NER3 117 aa7.94□□□□□ -1.14
TPM3-212ENST00000368533 LINC01619G3V211 115 aa7.94□□□□□ -1.14
TPM3-212ENST00000368533 GAGE7O76087 117 aa7.94□□□□□ -1.14
TPM3-212ENST00000368533 GAGE12FP0CL80 117 aa7.94□□□□□ -1.14
TPM3-212ENST00000368533 GAGE12GP0CL81 117 aa7.94□□□□□ -1.14
TPM3-212ENST00000368533 GAGE12IP0CL82 117 aa7.94□□□□□ -1.14
TPM3-212ENST00000368533 GAGE4Q13068 117 aa7.94□□□□□ -1.14
TPM3-212ENST00000368533 ANKRD29Q8N6D5 301 aa7.94□□□□□ -1.14
TPM3-212ENST00000368533 RAX2Q96IS3 184 aa7.94□□□□□ -1.14
TPM3-212ENST00000368533 TRAV12-2A0A075B6T6 113 aa7.93□□□□□ -1.14
TPM3-212ENST00000368533 NDUFV3P56181 108 aaKnown RBP7.93□□□□□ -1.14
TPM3-212ENST00000368533 PPDPFLQ8WWR9 84 aa7.93□□□□□ -1.14
TPM3-212ENST00000368533 PPDPFQ9H3Y8 114 aa7.93□□□□□ -1.14
TPM3-212ENST00000368533 TRAV21A0A0B4J279 112 aa7.93□□□□□ -1.14
TPM3-212ENST00000368533 TCL1BO95988 128 aa7.93□□□□□ -1.14
TPM3-212ENST00000368533 ASIPP42127 132 aa7.93□□□□□ -1.14
TPM3-212ENST00000368533 HILS1P60008 231 aa7.93□□□□□ -1.14
TPM3-212ENST00000368533 MRPL53Q96EL3 112 aaKnown RBP7.93□□□□□ -1.14
TPM3-212ENST00000368533 GNRH2O43555 120 aa7.92□□□□□ -1.14
TPM3-212ENST00000368533 ATP5LO75964 103 aa7.92□□□□□ -1.14
TPM3-212ENST00000368533 RNASE1P07998 156 aaKnown RBP7.92□□□□□ -1.14
TPM3-212ENST00000368533 HTN1P15515 57 aa7.92□□□□□ -1.14
TPM3-212ENST00000368533 GAGE2BQ13066 116 aa7.92□□□□□ -1.14
TPM3-212ENST00000368533 GAGE2EQ4V326 116 aa7.92□□□□□ -1.14
TPM3-212ENST00000368533 LINC00477Q96M19 166 aa7.92□□□□□ -1.14
TPM3-212ENST00000368533 GAGE2DQ9UEU5 116 aa7.92□□□□□ -1.14
TPM3-212ENST00000368533 STAB1Q9NY15 2570 aa7.92□□□□□ -1.14
TPM3-212ENST00000368533 SOCS3O14543 225 aa7.92□□□□□ -1.14
TPM3-212ENST00000368533 TEN1Q86WV5 123 aa7.92□□□□□ -1.14
TPM3-212ENST00000368533 TMEM61Q8N0U2 210 aa7.92□□□□□ -1.14
TPM3-212ENST00000368533 TMEM86BQ8N661 226 aa7.92□□□□□ -1.14
TPM3-212ENST00000368533 ZNF580Q9UK33 172 aa7.92□□□□□ -1.14
TPM3-212ENST00000368533 KNCNA6PVL3 124 aa7.92□□□□□ -1.14
TPM3-212ENST00000368533 OVOL1O14753 267 aa7.92□□□□□ -1.14
TPM3-212ENST00000368533 TTC32Q5I0X7 151 aa7.92□□□□□ -1.14
TPM3-212ENST00000368533 DCANP1Q8TF63 244 aa7.92□□□□□ -1.14
TPM3-212ENST00000368533 NBEAL2Q6ZNJ1 2754 aa7.91□□□□□ -1.14
TPM3-212ENST00000368533 SRSF9Q13242 221 aaKnown RBP eCLIP7.91□□□□□ -1.14
TPM3-212ENST00000368533 APRG1Q8IVJ8 170 aa7.91□□□□□ -1.14
TPM3-212ENST00000368533 DYNLRB2Q8TF09 96 aa7.91□□□□□ -1.14
TPM3-212ENST00000368533 PLEKHB2Q96CS7 222 aa7.91□□□□□ -1.14
TPM3-212ENST00000368533 RPL39LQ96EH5 51 aaKnown RBP7.91□□□□□ -1.14
TPM3-212ENST00000368533 F5H697 171 aa7.91□□□□□ -1.14
TPM3-212ENST00000368533 H7C2G1 150 aa7.91□□□□□ -1.14
TPM3-212ENST00000368533 CCL24O00175 119 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms