RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 CBLN2Q8IUK8 224 aa8.83□□□□□ -1
EFNA1-201ENST00000368406 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.83□□□□□ -1
EFNA1-201ENST00000368406 RPL36ALQ969Q0 106 aaKnown RBP8.83□□□□□ -1
EFNA1-201ENST00000368406 ALMS1Q8TCU4 4167 aa8.83□□□□□ -1
EFNA1-201ENST00000368406 HYDINQ4G0P3 5121 aa8.83□□□□□ -1
EFNA1-201ENST00000368406 TGIF2-C20orf24A0A0A6YYL0 155 aa8.82□□□□□ -1
EFNA1-201ENST00000368406 TRBV10-1A0A0K0K1A3 114 aa8.82□□□□□ -1
EFNA1-201ENST00000368406 LY6G6CO95867 125 aa8.82□□□□□ -1
EFNA1-201ENST00000368406 LINC00315P59091 139 aa8.82□□□□□ -1
EFNA1-201ENST00000368406 UBE2DNLQ8IWF7 75 aa8.82□□□□□ -1
EFNA1-201ENST00000368406 MRAP2Q96G30 205 aa8.82□□□□□ -1
EFNA1-201ENST00000368406 TNFRSF18Q9Y5U5 241 aa8.82□□□□□ -1
EFNA1-201ENST00000368406 NCR2O95944 276 aa8.81□□□□□ -1
EFNA1-201ENST00000368406 RAB4AP20338 218 aa8.81□□□□□ -1
EFNA1-201ENST00000368406 ELOBQ15370 118 aa8.81□□□□□ -1
EFNA1-201ENST00000368406 OR10J3Q5JRS4 329 aa8.81□□□□□ -1
EFNA1-201ENST00000368406 FAM104BQ5XKR9 115 aa8.81□□□□□ -1
EFNA1-201ENST00000368406 NEGR1Q7Z3B1 354 aa8.81□□□□□ -1
EFNA1-201ENST00000368406 SH2D6Q7Z4S9 175 aa8.81□□□□□ -1
EFNA1-201ENST00000368406 ZNRF2Q8NHG8 242 aa8.81□□□□□ -1
EFNA1-201ENST00000368406 M0QY20 66 aa8.8□□□□□ -1
EFNA1-201ENST00000368406 CKS2P33552 79 aa8.8□□□□□ -1
EFNA1-201ENST00000368406 COX19Q49B96 90 aa8.8□□□□□ -1
EFNA1-201ENST00000368406 MRPL51Q4U2R6 128 aaKnown RBP8.8□□□□□ -1
EFNA1-201ENST00000368406 GATD1Q8NB37 220 aa8.8□□□□□ -1
EFNA1-201ENST00000368406 NEXN-AS1Q8NBZ9 246 aa8.8□□□□□ -1
EFNA1-201ENST00000368406 FRZBQ92765 325 aa8.8□□□□□ -1
EFNA1-201ENST00000368406 VPS13DQ5THJ4 4388 aa8.8□□□□□ -1
EFNA1-201ENST00000368406 TRBV7-3A0A075B6L6 115 aa8.8□□□□□ -1
EFNA1-201ENST00000368406 SMKR1H3BMG3 65 aa8.8□□□□□ -1
EFNA1-201ENST00000368406 HLA-DQA1P01909 254 aa8.8□□□□□ -1
EFNA1-201ENST00000368406 ATP6V0E2Q8NHE4 81 aa8.8□□□□□ -1
EFNA1-201ENST00000368406 RNF185Q96GF1 192 aa8.8□□□□□ -1
EFNA1-201ENST00000368406 DNAJC30Q96LL9 226 aa8.8□□□□□ -1
EFNA1-201ENST00000368406 NIT2Q9NQR4 276 aa8.8□□□□□ -1
EFNA1-201ENST00000368406 D6R8Y8 96 aa8.79□□□□□ -1
EFNA1-201ENST00000368406 APCSP02743 223 aa8.79□□□□□ -1
EFNA1-201ENST00000368406 MT-ND6P03923 174 aa8.79□□□□□ -1
EFNA1-201ENST00000368406 CCL18P55774 89 aa8.79□□□□□ -1
EFNA1-201ENST00000368406 TMEM136Q6ZRR5 245 aa8.79□□□□□ -1
EFNA1-201ENST00000368406 RPL39LQ96EH5 51 aaKnown RBP8.79□□□□□ -1
EFNA1-201ENST00000368406 GNB1LQ9BYB4 327 aa8.79□□□□□ -1
EFNA1-201ENST00000368406 TRBV24-1A0A075B6N3 115 aa8.78□□□□□ -1
EFNA1-201ENST00000368406 SCO1O75880 301 aa8.78□□□□□ -1
EFNA1-201ENST00000368406 PPP1R17O96001 155 aa8.78□□□□□ -1
EFNA1-201ENST00000368406 ORMDL3Q8N138 153 aa8.78□□□□□ -1
EFNA1-201ENST00000368406 ST20Q9HBF5 79 aa8.78□□□□□ -1
EFNA1-201ENST00000368406 Q9UF83 564 aa8.78□□□□□ -1
EFNA1-201ENST00000368406 KMT2AQ03164 3969 aa8.77□□□□□ -1
EFNA1-201ENST00000368406 IGHV3-38A0A0C4DH36 116 aa8.77□□□□□ -1.01
EFNA1-201ENST00000368406 PPBPP02775 128 aa8.77□□□□□ -1.01
EFNA1-201ENST00000368406 UBE2D3P61077 147 aa8.77□□□□□ -1.01
EFNA1-201ENST00000368406 UBE2D2P62837 147 aa8.77□□□□□ -1.01
EFNA1-201ENST00000368406 FABP9Q0Z7S8 132 aa8.77□□□□□ -1.01
EFNA1-201ENST00000368406 MRPL18Q9H0U6 180 aaKnown RBP8.77□□□□□ -1.01
EFNA1-201ENST00000368406 TRAPPC1Q9Y5R8 145 aa8.77□□□□□ -1.01
EFNA1-201ENST00000368406 DAZ4Q86SG3 579 aaKnown RBP8.76□□□□□ -1.01
EFNA1-201ENST00000368406 PRELID3AQ96N28 172 aa8.76□□□□□ -1.01
EFNA1-201ENST00000368406 GTSF1LQ9H1H1 148 aa8.76□□□□□ -1.01
EFNA1-201ENST00000368406 DAZ3Q9NR90 486 aaKnown RBP8.76□□□□□ -1.01
EFNA1-201ENST00000368406 LINC00694P0DN24 101 aa8.75□□□□□ -1.01
EFNA1-201ENST00000368406 RPS10P46783 165 aaKnown RBP8.75□□□□□ -1.01
EFNA1-201ENST00000368406 SDHAF1A6NFY7 115 aa8.74□□□□□ -1.01
EFNA1-201ENST00000368406 GAS8-AS1O95177 125 aa8.74□□□□□ -1.01
EFNA1-201ENST00000368406 TNFRSF6BO95407 300 aa8.74□□□□□ -1.01
EFNA1-201ENST00000368406 PMCHP20382 165 aa8.74□□□□□ -1.01
EFNA1-201ENST00000368406 ESRGQ1W209 222 aa8.74□□□□□ -1.01
EFNA1-201ENST00000368406 KIAA1644Q3SXP7 199 aa8.74□□□□□ -1.01
EFNA1-201ENST00000368406 LYPD5Q6UWN5 251 aa8.74□□□□□ -1.01
EFNA1-201ENST00000368406 YPEL4Q96NS1 127 aa8.74□□□□□ -1.01
EFNA1-201ENST00000368406 TRAV8-6A0A0B4J262 113 aa8.73□□□□□ -1.01
EFNA1-201ENST00000368406 NPYP01303 97 aa8.73□□□□□ -1.01
EFNA1-201ENST00000368406 SUMO2P61956 95 aaKnown RBP8.73□□□□□ -1.01
EFNA1-201ENST00000368406 COTL1Q14019 142 aa8.73□□□□□ -1.01
EFNA1-201ENST00000368406 TMEM97Q5BJF2 176 aa8.73□□□□□ -1.01
EFNA1-201ENST00000368406 NRACQ8N912 160 aa8.73□□□□□ -1.01
EFNA1-201ENST00000368406 MAP1LC3AQ9H492 121 aa8.73□□□□□ -1.01
EFNA1-201ENST00000368406 LINC00588Q9Y4M8 146 aa8.73□□□□□ -1.01
EFNA1-201ENST00000368406 TRBV6-5A0A0K0K1A5 114 aa8.72□□□□□ -1.01
EFNA1-201ENST00000368406 DEFB104AQ8WTQ1 72 aa8.72□□□□□ -1.01
EFNA1-201ENST00000368406 LAMTOR2Q9Y2Q5 125 aa8.72□□□□□ -1.01
EFNA1-201ENST00000368406 MRPS16Q9Y3D3 137 aaKnown RBP8.72□□□□□ -1.01
EFNA1-201ENST00000368406 LOC389332A0A1B0GUA5 103 aa8.71□□□□□ -1.01
EFNA1-201ENST00000368406 I3L3M4 83 aa8.71□□□□□ -1.01
EFNA1-201ENST00000368406 PHOX2AO14813 284 aa8.71□□□□□ -1.01
EFNA1-201ENST00000368406 FCER1GP30273 86 aa8.71□□□□□ -1.01
EFNA1-201ENST00000368406 TIRAPP58753 221 aa8.71□□□□□ -1.01
EFNA1-201ENST00000368406 LELP1Q5T871 98 aa8.71□□□□□ -1.01
EFNA1-201ENST00000368406 KIR2DL4Q99706 377 aa8.71□□□□□ -1.01
EFNA1-201ENST00000368406 C20orf78Q9BR46 151 aa8.71□□□□□ -1.01
EFNA1-201ENST00000368406 TMEM70Q9BUB7 260 aa8.71□□□□□ -1.01
EFNA1-201ENST00000368406 TRBV25-1A0A075B6N4 114 aa8.71□□□□□ -1.02
EFNA1-201ENST00000368406 IGHV1-24A0A0C4DH33 117 aa8.71□□□□□ -1.02
EFNA1-201ENST00000368406 VCYO14598 125 aa8.71□□□□□ -1.02
EFNA1-201ENST00000368406 RAB5AP20339 215 aa8.71□□□□□ -1.02
EFNA1-201ENST00000368406 AMTP48728 403 aa8.71□□□□□ -1.02
EFNA1-201ENST00000368406 CHCHD5Q9BSY4 110 aa8.71□□□□□ -1.02
EFNA1-201ENST00000368406 SMIM2Q9BVW6 85 aa8.71□□□□□ -1.02
EFNA1-201ENST00000368406 TRBV6-8A0A0A6YYG3 113 aa8.7□□□□□ -1.02
EFNA1-201ENST00000368406 UBE2L6O14933 153 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms