RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 CFPP27918 469 aa6.74□□□□□ -1.33
SYNE1-206ENST00000367253 C10orf91Q5T1B1 145 aa6.74□□□□□ -1.33
SYNE1-206ENST00000367253 LINC00526Q96FQ7 95 aa6.74□□□□□ -1.33
SYNE1-206ENST00000367253 NOP10Q9NPE3 64 aaKnown RBP6.74□□□□□ -1.33
SYNE1-206ENST00000367253 MRPL51Q4U2R6 128 aaKnown RBP6.74□□□□□ -1.33
SYNE1-206ENST00000367253 SPATA12Q7Z6I5 190 aa6.74□□□□□ -1.33
SYNE1-206ENST00000367253 BLCAPP62952 87 aa6.73□□□□□ -1.33
SYNE1-206ENST00000367253 LINC00114Q6XXX2 140 aa6.73□□□□□ -1.33
SYNE1-206ENST00000367253 ROS1P08922 2347 aa6.73□□□□□ -1.33
SYNE1-206ENST00000367253 SDHAF1A6NFY7 115 aa6.73□□□□□ -1.33
SYNE1-206ENST00000367253 C15orf62A8K5M9 175 aa6.73□□□□□ -1.33
SYNE1-206ENST00000367253 NDUFS7O75251 213 aa6.73□□□□□ -1.33
SYNE1-206ENST00000367253 CD164L2Q6UWJ8 174 aa6.73□□□□□ -1.33
SYNE1-206ENST00000367253 TMEM75Q8N9X5 138 aa6.73□□□□□ -1.33
SYNE1-206ENST00000367253 IGLV3-9A0A075B6K5 115 aa6.73□□□□□ -1.33
SYNE1-206ENST00000367253 PYGO1Q9Y3Y4 419 aa6.73□□□□□ -1.33
SYNE1-206ENST00000367253 NDUFC1O43677 76 aa6.72□□□□□ -1.33
SYNE1-206ENST00000367253 IGHV3-30P01768 117 aa6.72□□□□□ -1.33
SYNE1-206ENST00000367253 IGHV3-33P01772 117 aa6.72□□□□□ -1.33
SYNE1-206ENST00000367253 IGHV3-30-3P0DP02 117 aa6.72□□□□□ -1.33
SYNE1-206ENST00000367253 IGHV3-30-5P0DP03 117 aa6.72□□□□□ -1.33
SYNE1-206ENST00000367253 ZNRD1Q9P1U0 126 aa6.72□□□□□ -1.33
SYNE1-206ENST00000367253 PLXNB1O43157 2135 aa6.72□□□□□ -1.33
SYNE1-206ENST00000367253 A0A096LPF7 62 aa6.72□□□□□ -1.33
SYNE1-206ENST00000367253 G3V318 75 aa6.72□□□□□ -1.33
SYNE1-206ENST00000367253 J3QRE1 110 aa6.72□□□□□ -1.33
SYNE1-206ENST00000367253 K7ERS5 55 aa6.72□□□□□ -1.33
SYNE1-206ENST00000367253 IGHV4-38-2P0DP08 117 aa6.72□□□□□ -1.33
SYNE1-206ENST00000367253 V9GYV3 84 aa6.72□□□□□ -1.33
SYNE1-206ENST00000367253 KIF26AQ9ULI4 1882 aaPredicted RBP6.72□□□□□ -1.33
SYNE1-206ENST00000367253 NDUFA1O15239 70 aa6.72□□□□□ -1.33
SYNE1-206ENST00000367253 UTRNP46939 3433 aa6.72□□□□□ -1.33
SYNE1-206ENST00000367253 H0YGX0 51 aa6.72□□□□□ -1.33
SYNE1-206ENST00000367253 LINC00474Q9P2X8 69 aa6.72□□□□□ -1.33
SYNE1-206ENST00000367253 SMIM27A0A1W2PRY6 76 aa6.71□□□□□ -1.33
SYNE1-206ENST00000367253 NUPR1O60356 82 aa6.71□□□□□ -1.34
SYNE1-206ENST00000367253 HOXB4P17483 251 aaPredicted RBP6.71□□□□□ -1.34
SYNE1-206ENST00000367253 UBE2D3P61077 147 aa6.71□□□□□ -1.34
SYNE1-206ENST00000367253 ZNF837Q96EG3 531 aaPredicted RBP6.71□□□□□ -1.34
SYNE1-206ENST00000367253 SHANK2-AS3Q9BTD1 123 aa6.71□□□□□ -1.34
SYNE1-206ENST00000367253 HS3ST6Q96QI5 342 aa6.71□□□□□ -1.34
SYNE1-206ENST00000367253 ZNF747Q9BV97 191 aa6.71□□□□□ -1.34
SYNE1-206ENST00000367253 TRBV10-2A0A0K0K1G8 114 aa6.71□□□□□ -1.34
SYNE1-206ENST00000367253 REG3AQ06141 175 aa6.71□□□□□ -1.34
SYNE1-206ENST00000367253 CASC2Q6XLA1 102 aa6.71□□□□□ -1.34
SYNE1-206ENST00000367253 DYNAPQ8N1N2 210 aa6.71□□□□□ -1.34
SYNE1-206ENST00000367253 CD177Q8N6Q3 437 aa6.71□□□□□ -1.34
SYNE1-206ENST00000367253 SPRY4Q9C004 299 aa6.71□□□□□ -1.34
SYNE1-206ENST00000367253 E9PLD3 99 aa6.7□□□□□ -1.34
SYNE1-206ENST00000367253 PROP1O75360 226 aa6.7□□□□□ -1.34
SYNE1-206ENST00000367253 IGKV1-12A0A0C4DH73 117 aa6.7□□□□□ -1.34
SYNE1-206ENST00000367253 TEX49A0A1B0GTD5 131 aa6.7□□□□□ -1.34
SYNE1-206ENST00000367253 IGLV1-44P01699 117 aa6.7□□□□□ -1.34
SYNE1-206ENST00000367253 FANCMQ8IYD8 2048 aa6.7□□□□□ -1.34
SYNE1-206ENST00000367253 PRO0255Q9UI72 69 aa6.7□□□□□ -1.34
SYNE1-206ENST00000367253 CELA1Q9UNI1 258 aa6.7□□□□□ -1.34
SYNE1-206ENST00000367253 NREPQ16612 68 aa6.7□□□□□ -1.34
SYNE1-206ENST00000367253 B3GALT5-AS1P59052 145 aa6.7□□□□□ -1.34
SYNE1-206ENST00000367253 DIAPH2-AS1Q14236 149 aa6.7□□□□□ -1.34
SYNE1-206ENST00000367253 C1orf134Q5TEV5 83 aa6.7□□□□□ -1.34
SYNE1-206ENST00000367253 IGFL4Q6B9Z1 124 aa6.7□□□□□ -1.34
SYNE1-206ENST00000367253 C9orf85Q96MD7 179 aa6.7□□□□□ -1.34
SYNE1-206ENST00000367253 DSCAML1Q8TD84 2053 aa6.69□□□□□ -1.34
SYNE1-206ENST00000367253 CYYR1Q96J86 154 aa6.69□□□□□ -1.34
SYNE1-206ENST00000367253 TRBV27A0A0K0K1C4 114 aa6.69□□□□□ -1.34
SYNE1-206ENST00000367253 MRPS36P82909 103 aaKnown RBP6.69□□□□□ -1.34
SYNE1-206ENST00000367253 DEFB136Q30KP8 78 aa6.69□□□□□ -1.34
SYNE1-206ENST00000367253 WWC2-AS2Q96NR7 200 aa6.69□□□□□ -1.34
SYNE1-206ENST00000367253 U3KQA8 63 aa6.69□□□□□ -1.34
SYNE1-206ENST00000367253 IGF1P05019 195 aa6.69□□□□□ -1.34
SYNE1-206ENST00000367253 Q6YL49 198 aa6.69□□□□□ -1.34
SYNE1-206ENST00000367253 H3BQ85 93 aa6.69□□□□□ -1.34
SYNE1-206ENST00000367253 LINC00337Q8N6G1 96 aa6.69□□□□□ -1.34
SYNE1-206ENST00000367253 JMJD7-PLA2G4BH0Y9G9 81 aa6.68□□□□□ -1.34
SYNE1-206ENST00000367253 CRYGDP07320 174 aa6.68□□□□□ -1.34
SYNE1-206ENST00000367253 PRR15LQ9BU68 103 aa6.68□□□□□ -1.34
SYNE1-206ENST00000367253 LRRK1Q38SD2 2015 aa6.68□□□□□ -1.34
SYNE1-206ENST00000367253 PLXNB3Q9ULL4 1909 aa6.68□□□□□ -1.34
SYNE1-206ENST00000367253 IGKV2D-26A0A0A0MRZ7 120 aa6.68□□□□□ -1.34
SYNE1-206ENST00000367253 TRBV6-6A0A0A6YYG2 114 aa6.68□□□□□ -1.34
SYNE1-206ENST00000367253 IGKV1-16P04430 117 aa6.68□□□□□ -1.34
SYNE1-206ENST00000367253 IGKV1D-17A0A075B6S4 117 aa6.68□□□□□ -1.34
SYNE1-206ENST00000367253 MDFICQ9P1T7 246 aa6.68□□□□□ -1.34
SYNE1-206ENST00000367253 A0A087WZ39 114 aa6.67□□□□□ -1.34
SYNE1-206ENST00000367253 K7EMT4 169 aa6.67□□□□□ -1.34
SYNE1-206ENST00000367253 DKK1O94907 266 aa6.67□□□□□ -1.34
SYNE1-206ENST00000367253 KIF26BQ2KJY2 2108 aa6.67□□□□□ -1.34
SYNE1-206ENST00000367253 UPK3BQ9BT76 320 aa6.67□□□□□ -1.34
SYNE1-206ENST00000367253 LRRK2Q5S007 2527 aa6.67□□□□□ -1.34
SYNE1-206ENST00000367253 K7EM74 188 aa6.67□□□□□ -1.34
SYNE1-206ENST00000367253 A0A0G2JRQ6 117 aa6.67□□□□□ -1.34
SYNE1-206ENST00000367253 M0R2N4 97 aa6.67□□□□□ -1.34
SYNE1-206ENST00000367253 IGKV1-39P01597 117 aa6.67□□□□□ -1.34
SYNE1-206ENST00000367253 IGKV1D-39P04432 117 aa6.67□□□□□ -1.34
SYNE1-206ENST00000367253 SPATA3Q8NHX4 192 aa6.67□□□□□ -1.34
SYNE1-206ENST00000367253 TTTY13Q9BZ97 58 aa6.67□□□□□ -1.34
SYNE1-206ENST00000367253 IGHV3-16A0A0C4DH30 117 aa6.67□□□□□ -1.34
SYNE1-206ENST00000367253 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.67□□□□□ -1.34
SYNE1-206ENST00000367253 Q6ZQT7 251 aa6.67□□□□□ -1.34
SYNE1-206ENST00000367253 Q6ZS49 121 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms