RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 FAM159AQ6UWV7 190 aa10.15□□□□□ -0.79
PRKN-205ENST00000366897 C10orf126Q8N4M7 172 aa10.15□□□□□ -0.79
PRKN-205ENST00000366897 BEX4Q9NWD9 120 aaPredicted RBP10.15□□□□□ -0.79
PRKN-205ENST00000366897 A8MWV9 139 aa10.14□□□□□ -0.79
PRKN-205ENST00000366897 C9JAW5 83 aa10.14□□□□□ -0.79
PRKN-205ENST00000366897 ELANEP08246 267 aa10.14□□□□□ -0.79
PRKN-205ENST00000366897 BLCAPP62952 87 aa10.14□□□□□ -0.79
PRKN-205ENST00000366897 ATP6V0E2Q8NHE4 81 aa10.14□□□□□ -0.79
PRKN-205ENST00000366897 AMELXQ99217 191 aa10.14□□□□□ -0.79
PRKN-205ENST00000366897 MOB4Q9Y3A3 225 aa10.14□□□□□ -0.79
PRKN-205ENST00000366897 NOTCH3Q9UM47 2321 aa10.13□□□□□ -0.79
PRKN-205ENST00000366897 LGALS3P17931 250 aaKnown RBP10.13□□□□□ -0.79
PRKN-205ENST00000366897 KLK9Q2XQG4 91 aa10.13□□□□□ -0.79
PRKN-205ENST00000366897 SLC25A29Q8N8R3 303 aa10.13□□□□□ -0.79
PRKN-205ENST00000366897 RNF183Q96D59 192 aa10.13□□□□□ -0.79
PRKN-205ENST00000366897 MDFICQ9P1T7 246 aa10.13□□□□□ -0.79
PRKN-205ENST00000366897 PRO1854Q9UHT4 67 aa10.13□□□□□ -0.79
PRKN-205ENST00000366897 KLK9Q9UKQ9 250 aa10.13□□□□□ -0.79
PRKN-205ENST00000366897 ZNF56Q15929 161 aa10.13□□□□□ -0.79
PRKN-205ENST00000366897 TEX15Q9BXT5 2789 aa10.13□□□□□ -0.79
PRKN-205ENST00000366897 FAM223BA6NKX1 122 aa10.12□□□□□ -0.79
PRKN-205ENST00000366897 FAM223AQ8IWN6 122 aa10.12□□□□□ -0.79
PRKN-205ENST00000366897 FAM19A4Q96LR4 140 aa10.12□□□□□ -0.79
PRKN-205ENST00000366897 NDUFA4O00483 81 aa10.12□□□□□ -0.79
PRKN-205ENST00000366897 VCYO14598 125 aa10.12□□□□□ -0.79
PRKN-205ENST00000366897 FBN2P35556 2912 aa10.12□□□□□ -0.79
PRKN-205ENST00000366897 ZNF688P0C7X2 276 aa10.12□□□□□ -0.79
PRKN-205ENST00000366897 TMEM95Q3KNT9 176 aa10.12□□□□□ -0.79
PRKN-205ENST00000366897 ABCA12Q86UK0 2595 aa10.11□□□□□ -0.79
PRKN-205ENST00000366897 C19orf84I3L1E1 186 aa10.11□□□□□ -0.79
PRKN-205ENST00000366897 Q1RN00 199 aa10.11□□□□□ -0.79
PRKN-205ENST00000366897 ZNF876PQ49A33 203 aa10.11□□□□□ -0.79
PRKN-205ENST00000366897 C19orf54Q5BKX5 351 aa10.11□□□□□ -0.79
PRKN-205ENST00000366897 RNASE13Q5GAN3 156 aaKnown RBP10.11□□□□□ -0.79
PRKN-205ENST00000366897 IGHV4OR15-8A0A075B7B6 117 aa10.11□□□□□ -0.79
PRKN-205ENST00000366897 A0A087WW49 117 aa10.11□□□□□ -0.79
PRKN-205ENST00000366897 SLC25A20O43772 301 aa10.11□□□□□ -0.79
PRKN-205ENST00000366897 IGHV4-39P01824 125 aa10.11□□□□□ -0.79
PRKN-205ENST00000366897 IGHV1-69DA0A0B4J2H0 117 aa10.1□□□□□ -0.79
PRKN-205ENST00000366897 A0A0J9YXV3 536 aa10.1□□□□□ -0.79
PRKN-205ENST00000366897 PPP1R17O96001 155 aa10.1□□□□□ -0.79
PRKN-205ENST00000366897 MUSTN1Q8IVN3 82 aa10.1□□□□□ -0.79
PRKN-205ENST00000366897 C2CD3Q4AC94 2353 aa10.1□□□□□ -0.79
PRKN-205ENST00000366897 IGHV4-38-2P0DP08 117 aa10.1□□□□□ -0.79
PRKN-205ENST00000366897 LYRM7Q5U5X0 104 aa10.1□□□□□ -0.79
PRKN-205ENST00000366897 APCP25054 2843 aa10.1□□□□□ -0.79
PRKN-205ENST00000366897 IGHV3-73A0A0B4J1V6 119 aa10.09□□□□□ -0.79
PRKN-205ENST00000366897 HTN1P15515 57 aa10.09□□□□□ -0.79
PRKN-205ENST00000366897 NPC2P61916 151 aa10.09□□□□□ -0.79
PRKN-205ENST00000366897 NACAE9PAV3 2078 aa10.09□□□□□ -0.79
PRKN-205ENST00000366897 H3BUX3 64 aa10.09□□□□□ -0.79
PRKN-205ENST00000366897 NXPH4O95158 308 aa10.09□□□□□ -0.79
PRKN-205ENST00000366897 MED14OSP0DP75 135 aa10.09□□□□□ -0.79
PRKN-205ENST00000366897 PAPPA-AS1Q5QFB9 102 aa10.09□□□□□ -0.79
PRKN-205ENST00000366897 CEMP1Q6PRD7 247 aaPredicted RBP10.09□□□□□ -0.79
PRKN-205ENST00000366897 KLLNB2CW77 178 aa10.08□□□□□ -0.8
PRKN-205ENST00000366897 IGHV3-33P01772 117 aa10.08□□□□□ -0.8
PRKN-205ENST00000366897 P0DMU3 169 aa10.08□□□□□ -0.8
PRKN-205ENST00000366897 FAM231AP0DMU4 169 aa10.08□□□□□ -0.8
PRKN-205ENST00000366897 FAM231CP0DMU5 169 aa10.08□□□□□ -0.8
PRKN-205ENST00000366897 TMEM141Q96I45 108 aa10.08□□□□□ -0.8
PRKN-205ENST00000366897 TIMM17AQ99595 171 aa10.08□□□□□ -0.8
PRKN-205ENST00000366897 PRRC2AP48634 2157 aaKnown RBP10.08□□□□□ -0.8
PRKN-205ENST00000366897 TRBV20-1A0A075B6N2 111 aa10.08□□□□□ -0.8
PRKN-205ENST00000366897 Q6ZSV7 163 aa10.08□□□□□ -0.8
PRKN-205ENST00000366897 NTN5Q8WTR8 489 aaPredicted RBP10.08□□□□□ -0.8
PRKN-205ENST00000366897 ZANQ9Y493 2812 aa10.08□□□□□ -0.8
PRKN-205ENST00000366897 C10orf99Q6UWK7 81 aa10.08□□□□□ -0.8
PRKN-205ENST00000366897 APRG1Q8IVJ8 170 aa10.08□□□□□ -0.8
PRKN-205ENST00000366897 Q8N1Y9 231 aa10.08□□□□□ -0.8
PRKN-205ENST00000366897 SPXQ9BT56 116 aa10.08□□□□□ -0.8
PRKN-205ENST00000366897 PRM2P04554 102 aa10.07□□□□□ -0.8
PRKN-205ENST00000366897 SPINK13Q1W4C9 94 aa10.07□□□□□ -0.8
PRKN-205ENST00000366897 POM121L12Q8N7R1 296 aa10.07□□□□□ -0.8
PRKN-205ENST00000366897 ERG28Q9UKR5 140 aa10.07□□□□□ -0.8
PRKN-205ENST00000366897 TRAV8-3A0A0A6YYJ7 113 aa10.07□□□□□ -0.8
PRKN-205ENST00000366897 TRBV27A0A0K0K1C4 114 aa10.07□□□□□ -0.8
PRKN-205ENST00000366897 A8MZ25 164 aa10.07□□□□□ -0.8
PRKN-205ENST00000366897 M0QY20 66 aa10.07□□□□□ -0.8
PRKN-205ENST00000366897 PRSS2P07478 247 aa10.07□□□□□ -0.8
PRKN-205ENST00000366897 DAZ1Q9NQZ3 744 aaKnown RBP10.07□□□□□ -0.8
PRKN-205ENST00000366897 IGHV1-69P01742 117 aa10.06□□□□□ -0.8
PRKN-205ENST00000366897 ZNF22P17026 224 aaPredicted RBP10.06□□□□□ -0.8
PRKN-205ENST00000366897 SBSPONQ8IVN8 264 aa10.06□□□□□ -0.8
PRKN-205ENST00000366897 TMEM263Q8WUH6 116 aaKnown RBP10.06□□□□□ -0.8
PRKN-205ENST00000366897 ANAPC13Q9BS18 74 aa10.06□□□□□ -0.8
PRKN-205ENST00000366897 TMEM223A0PJW6 202 aa10.06□□□□□ -0.8
PRKN-205ENST00000366897 CRLF1O75462 422 aa10.06□□□□□ -0.8
PRKN-205ENST00000366897 IGHV3-16A0A0C4DH30 117 aa10.05□□□□□ -0.8
PRKN-205ENST00000366897 TEX49A0A1B0GTD5 131 aa10.05□□□□□ -0.8
PRKN-205ENST00000366897 PROK1P58294 105 aa10.05□□□□□ -0.8
PRKN-205ENST00000366897 Q9UF83 564 aa10.05□□□□□ -0.8
PRKN-205ENST00000366897 DCANP1Q8TF63 244 aa10.05□□□□□ -0.8
PRKN-205ENST00000366897 SS18L2Q9UHA2 77 aa10.05□□□□□ -0.8
PRKN-205ENST00000366897 POLQO75417 2590 aa10.05□□□□□ -0.8
PRKN-205ENST00000366897 RHODO00212 210 aa10.04□□□□□ -0.8
PRKN-205ENST00000366897 DUX5Q96PT3 197 aa10.04□□□□□ -0.8
PRKN-205ENST00000366897 TRAV4A0A0B4J268 109 aa10.04□□□□□ -0.8
PRKN-205ENST00000366897 IGHV4-61A0A0C4DH41 118 aa10.04□□□□□ -0.8
PRKN-205ENST00000366897 LGALS9O00182 355 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms