RNA–Protein interactions for RNA: ENST00000362773.1

RNU4-90P-201, Transcript of RNA, U4 small nuclear 90, pseudogene, humanhuman

BASIC

Gene RNU4-90P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-90P-201ENST00000362773 NIPSNAP2O75323 286 aa-2.16□□□□□ -2.76
RNU4-90P-201ENST00000362773 CTXN2P0C2S0 81 aa-2.16□□□□□ -2.76
RNU4-90P-201ENST00000362773 EDDM3BP56851 147 aa-2.16□□□□□ -2.76
RNU4-90P-201ENST00000362773 PLGLB1Q02325 96 aa-2.16□□□□□ -2.76
RNU4-90P-201ENST00000362773 DHRS4L2Q6PKH6 230 aa-2.16□□□□□ -2.76
RNU4-90P-201ENST00000362773 LXNQ9BS40 222 aa-2.16□□□□□ -2.76
RNU4-90P-201ENST00000362773 ZNF609O15014 1411 aa-2.17□□□□□ -2.76
RNU4-90P-201ENST00000362773 IFNA1P01562 189 aa-2.17□□□□□ -2.76
RNU4-90P-201ENST00000362773 MRPS15P82914 257 aaKnown RBP-2.17□□□□□ -2.76
RNU4-90P-201ENST00000362773 ERG28Q9UKR5 140 aa-2.17□□□□□ -2.76
RNU4-90P-201ENST00000362773 DNAH9Q9NYC9 4486 aa-2.18□□□□□ -2.76
RNU4-90P-201ENST00000362773 ANK3Q12955 4377 aaKnown RBP-2.18□□□□□ -2.76
RNU4-90P-201ENST00000362773 TRBV6-1A0A0K0K1D8 114 aa-2.18□□□□□ -2.76
RNU4-90P-201ENST00000362773 UQCRQO14949 82 aa-2.18□□□□□ -2.76
RNU4-90P-201ENST00000362773 SLC25A5P05141 298 aaKnown RBP-2.18□□□□□ -2.76
RNU4-90P-201ENST00000362773 SPCS2Q15005 226 aa-2.18□□□□□ -2.76
RNU4-90P-201ENST00000362773 HSD17B12Q53GQ0 312 aa-2.18□□□□□ -2.76
RNU4-90P-201ENST00000362773 METTL1Q9UBP6 276 aaKnown RBP-2.18□□□□□ -2.76
RNU4-90P-201ENST00000362773 AKAP13Q12802 2813 aa-2.18□□□□□ -2.76
RNU4-90P-201ENST00000362773 PAPPAQ13219 1627 aa-2.19□□□□□ -2.76
RNU4-90P-201ENST00000362773 LAMA3Q16787 3333 aa-2.19□□□□□ -2.76
RNU4-90P-201ENST00000362773 TRAV12-3A0A0B4J271 114 aa-2.19□□□□□ -2.76
RNU4-90P-201ENST00000362773 GNG3P63215 75 aa-2.19□□□□□ -2.76
RNU4-90P-201ENST00000362773 TMED2Q15363 201 aa-2.19□□□□□ -2.76
RNU4-90P-201ENST00000362773 HRCT1Q6UXD1 115 aa-2.19□□□□□ -2.76
RNU4-90P-201ENST00000362773 SMIM20Q8N5G0 67 aa-2.19□□□□□ -2.76
RNU4-90P-201ENST00000362773 DYNLRB2Q8TF09 96 aa-2.19□□□□□ -2.76
RNU4-90P-201ENST00000362773 DYDC1Q8WWB3 177 aa-2.19□□□□□ -2.76
RNU4-90P-201ENST00000362773 LAMTOR2Q9Y2Q5 125 aa-2.19□□□□□ -2.76
RNU4-90P-201ENST00000362773 MUC22E2RYF6 1773 aaPredicted RBP-2.19□□□□□ -2.76
RNU4-90P-201ENST00000362773 IBTKQ9P2D0 1353 aaPredicted RBP-2.2□□□□□ -2.76
RNU4-90P-201ENST00000362773 COX6B1P14854 86 aa-2.2□□□□□ -2.76
RNU4-90P-201ENST00000362773 RPL22P35268 128 aaKnown RBP-2.2□□□□□ -2.76
RNU4-90P-201ENST00000362773 STX19Q8N4C7 294 aa-2.2□□□□□ -2.76
RNU4-90P-201ENST00000362773 FAM24BQ8N5W8 94 aa-2.2□□□□□ -2.76
RNU4-90P-201ENST00000362773 ABCA13Q86UQ4 5058 aa-2.2□□□□□ -2.76
RNU4-90P-201ENST00000362773 ERCC6L2Q5T890 1561 aa-2.2□□□□□ -2.76
RNU4-90P-201ENST00000362773 WDR7Q9Y4E6 1490 aa-2.2□□□□□ -2.76
RNU4-90P-201ENST00000362773 CFAP126Q5VTH2 177 aa-2.21□□□□□ -2.76
RNU4-90P-201ENST00000362773 CFAP53Q96M91 514 aa-2.21□□□□□ -2.76
RNU4-90P-201ENST00000362773 SDF2Q99470 211 aa-2.21□□□□□ -2.76
RNU4-90P-201ENST00000362773 NPVFQ9HCQ7 196 aa-2.21□□□□□ -2.76
RNU4-90P-201ENST00000362773 GOLGA4Q13439 2230 aaKnown RBP-2.21□□□□□ -2.76
RNU4-90P-201ENST00000362773 A2MP01023 1474 aa-2.21□□□□□ -2.76
RNU4-90P-201ENST00000362773 SPG11Q96JI7 2443 aa-2.21□□□□□ -2.76
RNU4-90P-201ENST00000362773 CLPSL1A2RUU4 121 aa-2.22□□□□□ -2.76
RNU4-90P-201ENST00000362773 SPINK4O60575 86 aa-2.22□□□□□ -2.76
RNU4-90P-201ENST00000362773 UFC1Q9Y3C8 167 aa-2.22□□□□□ -2.76
RNU4-90P-201ENST00000362773 CUBNO60494 3623 aa-2.23□□□□□ -2.77
RNU4-90P-201ENST00000362773 J3KT08 172 aa-2.23□□□□□ -2.77
RNU4-90P-201ENST00000362773 PIGYQ3MUY2 71 aa-2.23□□□□□ -2.77
RNU4-90P-201ENST00000362773 FXYD6Q9H0Q3 95 aa-2.23□□□□□ -2.77
RNU4-90P-201ENST00000362773 SLC35B3Q9H1N7 401 aa-2.23□□□□□ -2.77
RNU4-90P-201ENST00000362773 MED31Q9Y3C7 131 aa-2.23□□□□□ -2.77
RNU4-90P-201ENST00000362773 WDR87Q6ZQQ6 2873 aa-2.24□□□□□ -2.77
RNU4-90P-201ENST00000362773 TCRAP04437 139 aa-2.24□□□□□ -2.77
RNU4-90P-201ENST00000362773 HIST1H1BP16401 226 aaKnown RBP-2.24□□□□□ -2.77
RNU4-90P-201ENST00000362773 SNX29P2Q8IUI4 249 aa-2.24□□□□□ -2.77
RNU4-90P-201ENST00000362773 CEP19Q96LK0 163 aa-2.24□□□□□ -2.77
RNU4-90P-201ENST00000362773 DOCK1Q14185 1865 aa-2.24□□□□□ -2.77
RNU4-90P-201ENST00000362773 ZCCHC11Q5TAX3 1644 aaKnown RBP-2.24□□□□□ -2.77
RNU4-90P-201ENST00000362773 CCDC179H3BU77 68 aa-2.25□□□□□ -2.77
RNU4-90P-201ENST00000362773 S100A3P33764 101 aa-2.25□□□□□ -2.77
RNU4-90P-201ENST00000362773 BAGE3Q86Y29 109 aa-2.25□□□□□ -2.77
RNU4-90P-201ENST00000362773 SPRR2FQ96RM1 72 aa-2.25□□□□□ -2.77
RNU4-90P-201ENST00000362773 UHRF1BP1LA0JNW5 1464 aa-2.26□□□□□ -2.77
RNU4-90P-201ENST00000362773 HSD11B1P28845 292 aa-2.26□□□□□ -2.77
RNU4-90P-201ENST00000362773 REEP5Q00765 189 aa-2.26□□□□□ -2.77
RNU4-90P-201ENST00000362773 ATP6V0E2Q8NHE4 81 aa-2.26□□□□□ -2.77
RNU4-90P-201ENST00000362773 TRAPPC2LQ9UL33 140 aa-2.26□□□□□ -2.77
RNU4-90P-201ENST00000362773 NOP16Q9Y3C1 178 aaKnown RBP-2.26□□□□□ -2.77
RNU4-90P-201ENST00000362773 YTHDC2Q9H6S0 1430 aaKnown RBP-2.26□□□□□ -2.77
RNU4-90P-201ENST00000362773 KDM5CP41229 1560 aa-2.27□□□□□ -2.77
RNU4-90P-201ENST00000362773 DCUN1D2Q6PH85 259 aa-2.27□□□□□ -2.77
RNU4-90P-201ENST00000362773 DNAJC15Q9Y5T4 150 aa-2.27□□□□□ -2.77
RNU4-90P-201ENST00000362773 XIRP1Q702N8 1843 aaKnown RBP-2.27□□□□□ -2.77
RNU4-90P-201ENST00000362773 MED23Q9ULK4 1368 aa-2.27□□□□□ -2.77
RNU4-90P-201ENST00000362773 TEX15Q9BXT5 2789 aa-2.27□□□□□ -2.77
RNU4-90P-201ENST00000362773 TCTAP57738 103 aa-2.28□□□□□ -2.77
RNU4-90P-201ENST00000362773 AKAP9Q99996 3911 aa-2.28□□□□□ -2.77
RNU4-90P-201ENST00000362773 NBASA2RRP1 2371 aa-2.28□□□□□ -2.77
RNU4-90P-201ENST00000362773 KDM5AP29375 1690 aaKnown RBP-2.28□□□□□ -2.77
RNU4-90P-201ENST00000362773 HTTP42858 3142 aa-2.28□□□□□ -2.78
RNU4-90P-201ENST00000362773 LAMA1P25391 3075 aa-2.29□□□□□ -2.78
RNU4-90P-201ENST00000362773 FAM92AA1XBS5 289 aa-2.29□□□□□ -2.78
RNU4-90P-201ENST00000362773 POLR2HP52434 150 aaKnown RBP-2.29□□□□□ -2.78
RNU4-90P-201ENST00000362773 DEFB135Q30KP9 77 aa-2.29□□□□□ -2.78
RNU4-90P-201ENST00000362773 TMEM91Q6ZNR0 172 aa-2.29□□□□□ -2.78
RNU4-90P-201ENST00000362773 CCDC32Q9BV29 185 aa-2.29□□□□□ -2.78
RNU4-90P-201ENST00000362773 CELSR3Q9NYQ7 3312 aa-2.3□□□□□ -2.78
RNU4-90P-201ENST00000362773 ANKRD11Q6UB99 2663 aaPredicted RBP-2.3□□□□□ -2.78
RNU4-90P-201ENST00000362773 UBE2D1P51668 147 aa-2.3□□□□□ -2.78
RNU4-90P-201ENST00000362773 PSPHP78330 225 aa-2.3□□□□□ -2.78
RNU4-90P-201ENST00000362773 THEM6Q8WUY1 208 aa-2.3□□□□□ -2.78
RNU4-90P-201ENST00000362773 AGPAT4-IT1Q9H0P7 198 aa-2.3□□□□□ -2.78
RNU4-90P-201ENST00000362773 LINC00472Q9H8W2 130 aa-2.3□□□□□ -2.78
RNU4-90P-201ENST00000362773 DYNC1H1Q14204 4646 aaKnown RBP-2.3□□□□□ -2.78
RNU4-90P-201ENST00000362773 MYH8P13535 1937 aa-2.3□□□□□ -2.78
RNU4-90P-201ENST00000362773 ZNF236Q9UL36 1845 aa-2.31□□□□□ -2.78
RNU4-90P-201ENST00000362773 SMIM6P0DI80 62 aa-2.31□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms