RNA–Protein interactions for RNA: ENST00000361813.5

SMG5-201, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG5, Length 4,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-201ENST00000361813 C20orf203Q8NBC4 194 aa13.58□□□□□ -0.24
SMG5-201ENST00000361813 IGHV3-30-3P0DP02 117 aa13.57□□□□□ -0.24
SMG5-201ENST00000361813 MED14OSP0DP75 135 aa13.57□□□□□ -0.24
SMG5-201ENST00000361813 A0A0J9YY99 117 aa13.57□□□□□ -0.24
SMG5-201ENST00000361813 LINC01619G3V211 115 aa13.57□□□□□ -0.24
SMG5-201ENST00000361813 DEFB136Q30KP8 78 aa13.57□□□□□ -0.24
SMG5-201ENST00000361813 CEP192Q8TEP8 1941 aa13.56□□□□□ -0.24
SMG5-201ENST00000361813 RNF223E7ERA6 249 aa13.56□□□□□ -0.24
SMG5-201ENST00000361813 C11orf21Q9P2W6 132 aa13.56□□□□□ -0.24
SMG5-201ENST00000361813 IGHV4-61A0A0C4DH41 118 aa13.56□□□□□ -0.24
SMG5-201ENST00000361813 TEX49A0A1B0GTD5 131 aa13.56□□□□□ -0.24
SMG5-201ENST00000361813 SLC25A29Q8N8R3 303 aa13.56□□□□□ -0.24
SMG5-201ENST00000361813 SETD2Q9BYW2 2564 aaPredicted RBP13.55□□□□□ -0.24
SMG5-201ENST00000361813 TNRC6BQ9UPQ9 1833 aaKnown RBP13.55□□□□□ -0.24
SMG5-201ENST00000361813 LGALS9O00182 355 aa13.55□□□□□ -0.24
SMG5-201ENST00000361813 TRACP01848 142 aa13.55□□□□□ -0.24
SMG5-201ENST00000361813 HHLA3Q9XRX5 114 aa13.55□□□□□ -0.24
SMG5-201ENST00000361813 ACYP1P07311 99 aa13.54□□□□□ -0.24
SMG5-201ENST00000361813 HAMPP81172 84 aa13.54□□□□□ -0.24
SMG5-201ENST00000361813 H3BT86 120 aa13.54□□□□□ -0.24
SMG5-201ENST00000361813 DEFB112Q30KQ8 113 aa13.53□□□□□ -0.24
SMG5-201ENST00000361813 APRG1Q8IVJ8 170 aa13.53□□□□□ -0.24
SMG5-201ENST00000361813 NRACQ8N912 160 aa13.53□□□□□ -0.24
SMG5-201ENST00000361813 UBL5Q9BZL1 73 aa13.53□□□□□ -0.24
SMG5-201ENST00000361813 SIRPDQ9H106 197 aa13.53□□□□□ -0.24
SMG5-201ENST00000361813 ODF3BA8MYP8 253 aa13.53□□□□□ -0.24
SMG5-201ENST00000361813 GATA3P23771 443 aa13.53□□□□□ -0.24
SMG5-201ENST00000361813 NCOR2Q9Y618 2525 aa13.53□□□□□ -0.24
SMG5-201ENST00000361813 CMC4P56277 68 aaPredicted RBP13.53□□□□□ -0.24
SMG5-201ENST00000361813 SPANXDQ9BXN6 97 aa13.52□□□□□ -0.24
SMG5-201ENST00000361813 ZFAND3Q9H8U3 227 aa13.52□□□□□ -0.24
SMG5-201ENST00000361813 NAV2Q8IVL1 2488 aa13.52□□□□□ -0.24
SMG5-201ENST00000361813 LY6LH3BQJ8 138 aa13.52□□□□□ -0.24
SMG5-201ENST00000361813 ELANEP08246 267 aa13.52□□□□□ -0.25
SMG5-201ENST00000361813 C20orf173Q96LM9 149 aa13.52□□□□□ -0.25
SMG5-201ENST00000361813 A0A096LNJ9 63 aa13.52□□□□□ -0.25
SMG5-201ENST00000361813 A0A0J9YXY3 114 aa13.52□□□□□ -0.25
SMG5-201ENST00000361813 NDUFV3P56181 108 aaKnown RBP13.52□□□□□ -0.25
SMG5-201ENST00000361813 IGHV1-58A0A0C4DH39 117 aa13.51□□□□□ -0.25
SMG5-201ENST00000361813 TMEM126AQ9H061 195 aa13.51□□□□□ -0.25
SMG5-201ENST00000361813 Q8NA96 180 aa13.51□□□□□ -0.25
SMG5-201ENST00000361813 ABCA2Q9BZC7 2435 aa13.51□□□□□ -0.25
SMG5-201ENST00000361813 TLN2Q9Y4G6 2542 aa13.51□□□□□ -0.25
SMG5-201ENST00000361813 IGKV3D-7A0A0C4DH55 119 aa13.51□□□□□ -0.25
SMG5-201ENST00000361813 C5orf38Q86SI9 138 aa13.51□□□□□ -0.25
SMG5-201ENST00000361813 ZFAND2AQ8N6M9 145 aa13.5□□□□□ -0.25
SMG5-201ENST00000361813 P0DMU3 169 aa13.5□□□□□ -0.25
SMG5-201ENST00000361813 FAM231AP0DMU4 169 aa13.5□□□□□ -0.25
SMG5-201ENST00000361813 FAM231CP0DMU5 169 aa13.5□□□□□ -0.25
SMG5-201ENST00000361813 CFAP126Q5VTH2 177 aa13.5□□□□□ -0.25
SMG5-201ENST00000361813 IGF2-ASQ6U949 168 aa13.5□□□□□ -0.25
SMG5-201ENST00000361813 CLPSL2Q6UWE3 100 aa13.49□□□□□ -0.25
SMG5-201ENST00000361813 NOP10Q9NPE3 64 aaKnown RBP13.49□□□□□ -0.25
SMG5-201ENST00000361813 SPATA25Q9BR10 227 aa13.49□□□□□ -0.25
SMG5-201ENST00000361813 SND1-IT1Q9HBX3 110 aa13.49□□□□□ -0.25
SMG5-201ENST00000361813 SLURP1P55000 103 aa13.49□□□□□ -0.25
SMG5-201ENST00000361813 Q6ZQT7 251 aa13.49□□□□□ -0.25
SMG5-201ENST00000361813 TRBV7-3A0A075B6L6 115 aa13.48□□□□□ -0.25
SMG5-201ENST00000361813 CRLF1O75462 422 aa13.48□□□□□ -0.25
SMG5-201ENST00000361813 XGP55808 180 aa13.48□□□□□ -0.25
SMG5-201ENST00000361813 A0A0B4J2C4 111 aa13.48□□□□□ -0.25
SMG5-201ENST00000361813 ADORA2A-AS1P86434 159 aa13.48□□□□□ -0.25
SMG5-201ENST00000361813 VSIG2Q96IQ7 327 aa13.48□□□□□ -0.25
SMG5-201ENST00000361813 USP9XQ93008 2570 aaPredicted RBP13.47□□□□□ -0.25
SMG5-201ENST00000361813 NFE4Q86UQ8 179 aa13.47□□□□□ -0.25
SMG5-201ENST00000361813 CLUHP3Q96NS8 147 aa13.47□□□□□ -0.25
SMG5-201ENST00000361813 A0A096LPF7 62 aa13.47□□□□□ -0.25
SMG5-201ENST00000361813 A0A0J9YX75 114 aa13.47□□□□□ -0.25
SMG5-201ENST00000361813 IGHV3-33P01772 117 aa13.47□□□□□ -0.25
SMG5-201ENST00000361813 HERV-K104P63124 156 aa13.47□□□□□ -0.25
SMG5-201ENST00000361813 TET2Q6N021 2002 aaPredicted RBP13.47□□□□□ -0.25
SMG5-201ENST00000361813 C5orf42Q9H799 3197 aa13.47□□□□□ -0.25
SMG5-201ENST00000361813 ZNF22P17026 224 aaPredicted RBP13.47□□□□□ -0.25
SMG5-201ENST00000361813 IGHG2P01859 326 aa13.46□□□□□ -0.25
SMG5-201ENST00000361813 XCL1P47992 114 aa13.46□□□□□ -0.25
SMG5-201ENST00000361813 USP9YO00507 2555 aaPredicted RBP13.46□□□□□ -0.25
SMG5-201ENST00000361813 K7EMT4 169 aa13.46□□□□□ -0.25
SMG5-201ENST00000361813 FSTL3O95633 263 aa13.46□□□□□ -0.25
SMG5-201ENST00000361813 PRR9Q5T870 116 aa13.46□□□□□ -0.25
SMG5-201ENST00000361813 AGRNO00468 2067 aa13.46□□□□□ -0.26
SMG5-201ENST00000361813 HIVEP3Q5T1R4 2406 aa13.46□□□□□ -0.26
SMG5-201ENST00000361813 EXPH5Q8NEV8 1989 aa13.45□□□□□ -0.26
SMG5-201ENST00000361813 Q6ZS46 218 aa13.45□□□□□ -0.26
SMG5-201ENST00000361813 A0A1B0GX51 115 aa13.45□□□□□ -0.26
SMG5-201ENST00000361813 MIAQ16674 131 aa13.45□□□□□ -0.26
SMG5-201ENST00000361813 IGHV4-30-2A0A087WSY4 118 aa13.45□□□□□ -0.26
SMG5-201ENST00000361813 IGHV4OR15-8A0A075B7B6 117 aa13.44□□□□□ -0.26
SMG5-201ENST00000361813 A0A087WW49 117 aa13.44□□□□□ -0.26
SMG5-201ENST00000361813 MRPS12O15235 138 aaKnown RBP13.44□□□□□ -0.26
SMG5-201ENST00000361813 TRIAP1O43715 76 aa13.44□□□□□ -0.26
SMG5-201ENST00000361813 GPHB5Q86YW7 130 aa13.44□□□□□ -0.26
SMG5-201ENST00000361813 CNFNQ9BYD5 112 aa13.44□□□□□ -0.26
SMG5-201ENST00000361813 IGHV3-30P01768 117 aa13.43□□□□□ -0.26
SMG5-201ENST00000361813 IGHV3-30-5P0DP03 117 aa13.43□□□□□ -0.26
SMG5-201ENST00000361813 Q9HAA7 133 aa13.43□□□□□ -0.26
SMG5-201ENST00000361813 ORMDL1Q9P0S3 153 aa13.42□□□□□ -0.26
SMG5-201ENST00000361813 TMEM223A0PJW6 202 aa13.42□□□□□ -0.26
SMG5-201ENST00000361813 COL5A1P20908 1838 aaPredicted RBP13.42□□□□□ -0.26
SMG5-201ENST00000361813 EBI3Q14213 229 aa13.42□□□□□ -0.26
SMG5-201ENST00000361813 IGLV4-3A0A075B6K6 122 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms