RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 MSRB2Q9Y3D2 182 aa9.63□□□□□ -0.87
VAMP1-201ENST00000361716 TRIAP1O43715 76 aa9.62□□□□□ -0.87
VAMP1-201ENST00000361716 VPS13CQ709C8 3753 aa9.62□□□□□ -0.87
VAMP1-201ENST00000361716 COX6B1P14854 86 aa9.62□□□□□ -0.87
VAMP1-201ENST00000361716 DAND5Q8N907 189 aa9.62□□□□□ -0.87
VAMP1-201ENST00000361716 IGHV7-81A0A0B4J1V7 117 aa9.62□□□□□ -0.87
VAMP1-201ENST00000361716 ZNRF2Q8NHG8 242 aa9.62□□□□□ -0.87
VAMP1-201ENST00000361716 CENPVL3A0A0U1RRI6 287 aa9.61□□□□□ -0.87
VAMP1-201ENST00000361716 KLRB1Q12918 225 aa9.61□□□□□ -0.87
VAMP1-201ENST00000361716 Q8NA96 180 aa9.61□□□□□ -0.87
VAMP1-201ENST00000361716 EDA2RQ9HAV5 297 aa9.61□□□□□ -0.87
VAMP1-201ENST00000361716 CRYGDP07320 174 aa9.61□□□□□ -0.87
VAMP1-201ENST00000361716 TNFRSF18Q9Y5U5 241 aa9.61□□□□□ -0.87
VAMP1-201ENST00000361716 LINC01546A6NGU7 62 aa9.6□□□□□ -0.87
VAMP1-201ENST00000361716 F8W735 103 aaPredicted RBP9.6□□□□□ -0.87
VAMP1-201ENST00000361716 SAA4P35542 130 aa9.6□□□□□ -0.87
VAMP1-201ENST00000361716 IGFL3Q6UXB1 125 aa9.6□□□□□ -0.87
VAMP1-201ENST00000361716 C8orf31Q8N9H6 132 aa9.6□□□□□ -0.87
VAMP1-201ENST00000361716 JMJD1CQ15652 2540 aa9.6□□□□□ -0.87
VAMP1-201ENST00000361716 TRAV41A0A0B4J266 112 aa9.6□□□□□ -0.87
VAMP1-201ENST00000361716 A0A0J9YXV3 536 aa9.6□□□□□ -0.87
VAMP1-201ENST00000361716 LINC01619G3V211 115 aa9.6□□□□□ -0.87
VAMP1-201ENST00000361716 BUB3O43684 328 aa9.6□□□□□ -0.87
VAMP1-201ENST00000361716 UBE2E1P51965 193 aa9.6□□□□□ -0.87
VAMP1-201ENST00000361716 IGHV3-73A0A0B4J1V6 119 aa9.6□□□□□ -0.87
VAMP1-201ENST00000361716 K7ENP7 123 aa9.6□□□□□ -0.87
VAMP1-201ENST00000361716 PAPPA-AS1Q5QFB9 102 aa9.6□□□□□ -0.87
VAMP1-201ENST00000361716 CEMP1Q6PRD7 247 aaPredicted RBP9.6□□□□□ -0.87
VAMP1-201ENST00000361716 IGLV4-69A0A075B6H9 119 aa9.59□□□□□ -0.87
VAMP1-201ENST00000361716 SDHAF1A6NFY7 115 aa9.59□□□□□ -0.87
VAMP1-201ENST00000361716 TRBV10-2A0A0K0K1G8 114 aa9.59□□□□□ -0.87
VAMP1-201ENST00000361716 LGALS9O00182 355 aa9.59□□□□□ -0.87
VAMP1-201ENST00000361716 ZFP36P26651 326 aaKnown RBP9.59□□□□□ -0.87
VAMP1-201ENST00000361716 M0R2P5 195 aa9.59□□□□□ -0.87
VAMP1-201ENST00000361716 ZNF625Q96I27 306 aaPredicted RBP9.59□□□□□ -0.87
VAMP1-201ENST00000361716 TMEM101Q96IK0 257 aa9.59□□□□□ -0.87
VAMP1-201ENST00000361716 A8MZ25 164 aa9.58□□□□□ -0.88
VAMP1-201ENST00000361716 CDSNQ15517 529 aa9.58□□□□□ -0.88
VAMP1-201ENST00000361716 HRNRQ86YZ3 2850 aaPredicted RBP9.58□□□□□ -0.88
VAMP1-201ENST00000361716 TSHBP01222 138 aa9.58□□□□□ -0.88
VAMP1-201ENST00000361716 TRBV12-3P01733 135 aa9.58□□□□□ -0.88
VAMP1-201ENST00000361716 TMEM263Q8WUH6 116 aaKnown RBP9.58□□□□□ -0.88
VAMP1-201ENST00000361716 RNF5Q99942 180 aa9.57□□□□□ -0.88
VAMP1-201ENST00000361716 FASNP49327 2511 aaKnown RBP9.57□□□□□ -0.88
VAMP1-201ENST00000361716 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.57□□□□□ -0.88
VAMP1-201ENST00000361716 TRAV21A0A0B4J279 112 aa9.57□□□□□ -0.88
VAMP1-201ENST00000361716 SBSPONQ8IVN8 264 aa9.57□□□□□ -0.88
VAMP1-201ENST00000361716 ABCA2Q9BZC7 2435 aa9.57□□□□□ -0.88
VAMP1-201ENST00000361716 TRAV12-2A0A075B6T6 113 aa9.56□□□□□ -0.88
VAMP1-201ENST00000361716 ICOSQ9Y6W8 199 aa9.56□□□□□ -0.88
VAMP1-201ENST00000361716 H7C423 109 aa9.56□□□□□ -0.88
VAMP1-201ENST00000361716 EIF4EBP3O60516 100 aaPredicted RBP9.56□□□□□ -0.88
VAMP1-201ENST00000361716 UNQ9165/PRO28630Q6UXU0 137 aa9.56□□□□□ -0.88
VAMP1-201ENST00000361716 NAV2Q8IVL1 2488 aa9.55□□□□□ -0.88
VAMP1-201ENST00000361716 LY6LH3BQJ8 138 aa9.55□□□□□ -0.88
VAMP1-201ENST00000361716 Q8N9W7 124 aa9.55□□□□□ -0.88
VAMP1-201ENST00000361716 PRRC2AP48634 2157 aaKnown RBP9.55□□□□□ -0.88
VAMP1-201ENST00000361716 CELSR2Q9HCU4 2923 aa9.55□□□□□ -0.88
VAMP1-201ENST00000361716 VCYO14598 125 aa9.55□□□□□ -0.88
VAMP1-201ENST00000361716 SUMO4Q6EEV6 95 aa9.54□□□□□ -0.88
VAMP1-201ENST00000361716 IGF2-ASQ6U949 168 aa9.54□□□□□ -0.88
VAMP1-201ENST00000361716 COX8CQ7Z4L0 72 aa9.54□□□□□ -0.88
VAMP1-201ENST00000361716 BPESC1Q9GZL8 116 aa9.54□□□□□ -0.88
VAMP1-201ENST00000361716 HERVK_113P63121 156 aa9.54□□□□□ -0.88
VAMP1-201ENST00000361716 FN1P02751 2386 aaKnown RBP9.54□□□□□ -0.88
VAMP1-201ENST00000361716 C20orf173Q96LM9 149 aa9.54□□□□□ -0.88
VAMP1-201ENST00000361716 CCDC140Q96MF4 163 aa9.54□□□□□ -0.88
VAMP1-201ENST00000361716 CLPSL1A2RUU4 121 aa9.53□□□□□ -0.88
VAMP1-201ENST00000361716 NPFFO15130 113 aa9.53□□□□□ -0.88
VAMP1-201ENST00000361716 SRSF2Q01130 221 aaKnown RBP9.53□□□□□ -0.88
VAMP1-201ENST00000361716 PRB1P04280 392 aa9.53□□□□□ -0.88
VAMP1-201ENST00000361716 NPBQ8NG41 125 aa9.53□□□□□ -0.88
VAMP1-201ENST00000361716 TIMM21Q9BVV7 248 aa9.53□□□□□ -0.88
VAMP1-201ENST00000361716 TMEM126AQ9H061 195 aa9.53□□□□□ -0.88
VAMP1-201ENST00000361716 KLK9Q9UKQ9 250 aa9.53□□□□□ -0.88
VAMP1-201ENST00000361716 TRAV13-1A0A0B4J241 112 aa9.52□□□□□ -0.89
VAMP1-201ENST00000361716 A0A0J9YXY3 114 aa9.52□□□□□ -0.89
VAMP1-201ENST00000361716 IGIPA6NJ69 53 aa9.52□□□□□ -0.89
VAMP1-201ENST00000361716 CD28P10747 220 aa9.52□□□□□ -0.89
VAMP1-201ENST00000361716 ZNF876PQ49A33 203 aa9.52□□□□□ -0.89
VAMP1-201ENST00000361716 GAGE2AQ6NT46 116 aa9.52□□□□□ -0.89
VAMP1-201ENST00000361716 CSDC2Q9Y534 153 aaKnown RBP9.52□□□□□ -0.89
VAMP1-201ENST00000361716 TMEM190Q8WZ59 177 aa9.52□□□□□ -0.89
VAMP1-201ENST00000361716 KNCNA6PVL3 124 aa9.51□□□□□ -0.89
VAMP1-201ENST00000361716 LEPROTO15243 131 aa9.51□□□□□ -0.89
VAMP1-201ENST00000361716 PSMG3-AS1Q96PY0 264 aa9.51□□□□□ -0.89
VAMP1-201ENST00000361716 LINC01587Q99440 93 aa9.51□□□□□ -0.89
VAMP1-201ENST00000361716 NDUFA12Q9UI09 145 aa9.51□□□□□ -0.89
VAMP1-201ENST00000361716 PPP1R17O96001 155 aa9.51□□□□□ -0.89
VAMP1-201ENST00000361716 KHDC1LQ5JSQ8 128 aa9.51□□□□□ -0.89
VAMP1-201ENST00000361716 Q6Q795 121 aa9.51□□□□□ -0.89
VAMP1-201ENST00000361716 GPHB5Q86YW7 130 aa9.51□□□□□ -0.89
VAMP1-201ENST00000361716 FAM110DQ8TAY7 271 aaPredicted RBP9.51□□□□□ -0.89
VAMP1-201ENST00000361716 TMEM141Q96I45 108 aa9.5□□□□□ -0.89
VAMP1-201ENST00000361716 A0A0B4J2C4 111 aa9.5□□□□□ -0.89
VAMP1-201ENST00000361716 I3L3M4 83 aa9.5□□□□□ -0.89
VAMP1-201ENST00000361716 P0DMU3 169 aa9.5□□□□□ -0.89
VAMP1-201ENST00000361716 FAM231AP0DMU4 169 aa9.5□□□□□ -0.89
VAMP1-201ENST00000361716 FAM231CP0DMU5 169 aa9.5□□□□□ -0.89
VAMP1-201ENST00000361716 NSUN5P1Q3KNT7 163 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms