RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 MXRA5Q9NR99 2828 aa6.34□□□□□ -1.4
RFX3-202ENST00000358730 KNCNA6PVL3 124 aa6.33□□□□□ -1.4
RFX3-202ENST00000358730 ETDBQ3ZM63 59 aa6.33□□□□□ -1.4
RFX3-202ENST00000358730 I3L3M4 83 aa6.33□□□□□ -1.4
RFX3-202ENST00000358730 J3QQQ9 107 aa6.33□□□□□ -1.4
RFX3-202ENST00000358730 RBMY1A1P0DJD3 496 aaKnown RBP6.33□□□□□ -1.4
RFX3-202ENST00000358730 RBMY1CP0DJD4 496 aa6.33□□□□□ -1.4
RFX3-202ENST00000358730 LGALS3P17931 250 aaKnown RBP6.33□□□□□ -1.4
RFX3-202ENST00000358730 SLURP1P55000 103 aa6.33□□□□□ -1.4
RFX3-202ENST00000358730 RBMY1FQ15415 496 aaKnown RBP6.33□□□□□ -1.4
RFX3-202ENST00000358730 SFTA2Q6UW10 78 aa6.33□□□□□ -1.4
RFX3-202ENST00000358730 SH2D6Q7Z4S9 175 aa6.33□□□□□ -1.4
RFX3-202ENST00000358730 BEX4Q9NWD9 120 aaPredicted RBP6.33□□□□□ -1.4
RFX3-202ENST00000358730 ZFYVE26Q68DK2 2539 aa6.33□□□□□ -1.4
RFX3-202ENST00000358730 IGHV3-73A0A0B4J1V6 119 aa6.33□□□□□ -1.4
RFX3-202ENST00000358730 TSPAN13O95857 204 aa6.33□□□□□ -1.4
RFX3-202ENST00000358730 P0DMU3 169 aa6.33□□□□□ -1.4
RFX3-202ENST00000358730 FAM231AP0DMU4 169 aa6.33□□□□□ -1.4
RFX3-202ENST00000358730 FAM231CP0DMU5 169 aa6.33□□□□□ -1.4
RFX3-202ENST00000358730 Q6YL49 198 aa6.33□□□□□ -1.4
RFX3-202ENST00000358730 C20orf203Q8NBC4 194 aa6.33□□□□□ -1.4
RFX3-202ENST00000358730 PTPN13Q12923 2485 aa6.32□□□□□ -1.4
RFX3-202ENST00000358730 LOC107984156A0A0G2JMH3 177 aa6.32□□□□□ -1.4
RFX3-202ENST00000358730 DEFB131AP59861 70 aa6.32□□□□□ -1.4
RFX3-202ENST00000358730 NFE4Q86UQ8 179 aa6.32□□□□□ -1.4
RFX3-202ENST00000358730 ARL17AQ8IVW1 177 aa6.32□□□□□ -1.4
RFX3-202ENST00000358730 PRO0461Q9UI25 63 aa6.32□□□□□ -1.4
RFX3-202ENST00000358730 MYO9AB2RTY4 2548 aa6.32□□□□□ -1.4
RFX3-202ENST00000358730 J3QR89 54 aa6.32□□□□□ -1.4
RFX3-202ENST00000358730 C18orf65Q6ZTR6 163 aa6.32□□□□□ -1.4
RFX3-202ENST00000358730 DLX4Q92988 240 aaPredicted RBP6.32□□□□□ -1.4
RFX3-202ENST00000358730 CR1P17927 2039 aa6.32□□□□□ -1.4
RFX3-202ENST00000358730 IGHV3-64A0A075B6Q5 118 aa6.31□□□□□ -1.4
RFX3-202ENST00000358730 SLC25A29Q8N8R3 303 aa6.31□□□□□ -1.4
RFX3-202ENST00000358730 AMELXQ99217 191 aa6.31□□□□□ -1.4
RFX3-202ENST00000358730 ZNF462Q96JM2 2506 aa6.31□□□□□ -1.4
RFX3-202ENST00000358730 IGLV4-3A0A075B6K6 122 aa6.31□□□□□ -1.4
RFX3-202ENST00000358730 FSHBP01225 129 aa6.31□□□□□ -1.4
RFX3-202ENST00000358730 IGHV3-30P01768 117 aa6.31□□□□□ -1.4
RFX3-202ENST00000358730 IGHV3-30-5P0DP03 117 aa6.31□□□□□ -1.4
RFX3-202ENST00000358730 IGHV4-31P0DP07 118 aa6.31□□□□□ -1.4
RFX3-202ENST00000358730 NDUFA11Q86Y39 141 aa6.31□□□□□ -1.4
RFX3-202ENST00000358730 RNF152Q8N8N0 203 aa6.31□□□□□ -1.4
RFX3-202ENST00000358730 ABCA12Q86UK0 2595 aa6.3□□□□□ -1.4
RFX3-202ENST00000358730 TMEM223A0PJW6 202 aa6.3□□□□□ -1.4
RFX3-202ENST00000358730 ZNF22P17026 224 aaPredicted RBP6.3□□□□□ -1.4
RFX3-202ENST00000358730 KHDC1LQ5JSQ8 128 aa6.3□□□□□ -1.4
RFX3-202ENST00000358730 DUX3Q96PT4 197 aa6.3□□□□□ -1.4
RFX3-202ENST00000358730 VCX2Q9H322 139 aa6.3□□□□□ -1.4
RFX3-202ENST00000358730 NACAE9PAV3 2078 aa6.3□□□□□ -1.4
RFX3-202ENST00000358730 NAV2Q8IVL1 2488 aa6.3□□□□□ -1.4
RFX3-202ENST00000358730 PRB1P04280 392 aa6.3□□□□□ -1.4
RFX3-202ENST00000358730 PSMB2P49721 201 aa6.3□□□□□ -1.4
RFX3-202ENST00000358730 PROK1P58294 105 aa6.3□□□□□ -1.4
RFX3-202ENST00000358730 TSSC4Q9Y5U2 329 aaPredicted RBP6.3□□□□□ -1.4
RFX3-202ENST00000358730 A0A0J9YXV3 536 aa6.3□□□□□ -1.4
RFX3-202ENST00000358730 RHODO00212 210 aa6.3□□□□□ -1.4
RFX3-202ENST00000358730 LEPROTO15243 131 aa6.3□□□□□ -1.4
RFX3-202ENST00000358730 PRM2P04554 102 aa6.3□□□□□ -1.4
RFX3-202ENST00000358730 CD28P10747 220 aa6.3□□□□□ -1.4
RFX3-202ENST00000358730 LYRM7Q5U5X0 104 aa6.3□□□□□ -1.4
RFX3-202ENST00000358730 RBMY1BA6NDE4 496 aaKnown RBP6.29□□□□□ -1.4
RFX3-202ENST00000358730 RBMY1EA6NEQ0 496 aaKnown RBP6.29□□□□□ -1.4
RFX3-202ENST00000358730 H3BMM0 161 aa6.29□□□□□ -1.4
RFX3-202ENST00000358730 RBMY1DP0C7P1 496 aaKnown RBP6.29□□□□□ -1.4
RFX3-202ENST00000358730 CFC1BP0CG36 223 aa6.29□□□□□ -1.4
RFX3-202ENST00000358730 CFC1P0CG37 223 aa6.29□□□□□ -1.4
RFX3-202ENST00000358730 UBE2D3P61077 147 aa6.29□□□□□ -1.4
RFX3-202ENST00000358730 UBE2D2P62837 147 aa6.29□□□□□ -1.4
RFX3-202ENST00000358730 TMEM61Q8N0U2 210 aa6.29□□□□□ -1.4
RFX3-202ENST00000358730 SPAG8Q99932 426 aaPredicted RBP6.29□□□□□ -1.4
RFX3-202ENST00000358730 CFAP126Q5VTH2 177 aa6.29□□□□□ -1.4
RFX3-202ENST00000358730 TEX15Q9BXT5 2789 aa6.29□□□□□ -1.4
RFX3-202ENST00000358730 A8MWV9 139 aa6.28□□□□□ -1.4
RFX3-202ENST00000358730 M0R2P5 195 aa6.28□□□□□ -1.4
RFX3-202ENST00000358730 ZNF415Q09FC8 603 aa6.28□□□□□ -1.4
RFX3-202ENST00000358730 Q5PR19 223 aa6.28□□□□□ -1.4
RFX3-202ENST00000358730 C10orf126Q8N4M7 172 aa6.28□□□□□ -1.4
RFX3-202ENST00000358730 DYNLRB2Q8TF09 96 aa6.28□□□□□ -1.4
RFX3-202ENST00000358730 ZNF418Q8TF45 676 aaPredicted RBP6.28□□□□□ -1.4
RFX3-202ENST00000358730 GTSF1LQ9H1H1 148 aa6.28□□□□□ -1.4
RFX3-202ENST00000358730 PEMTQ9UBM1 199 aa6.28□□□□□ -1.4
RFX3-202ENST00000358730 TNFRSF18Q9Y5U5 241 aa6.28□□□□□ -1.4
RFX3-202ENST00000358730 PRRC2AP48634 2157 aaKnown RBP6.28□□□□□ -1.4
RFX3-202ENST00000358730 TLN2Q9Y4G6 2542 aa6.28□□□□□ -1.4
RFX3-202ENST00000358730 TRAV2A0A0B4J234 112 aa6.28□□□□□ -1.4
RFX3-202ENST00000358730 INSL3P51460 131 aa6.28□□□□□ -1.4
RFX3-202ENST00000358730 EDA2RQ9HAV5 297 aa6.28□□□□□ -1.4
RFX3-202ENST00000358730 USP24Q9UPU5 2620 aa6.28□□□□□ -1.4
RFX3-202ENST00000358730 GAGE12HA6NDE8 117 aa6.27□□□□□ -1.41
RFX3-202ENST00000358730 A8MTW9 85 aa6.27□□□□□ -1.41
RFX3-202ENST00000358730 RNASE13Q5GAN3 156 aaKnown RBP6.27□□□□□ -1.41
RFX3-202ENST00000358730 CEMP1Q6PRD7 247 aaPredicted RBP6.27□□□□□ -1.41
RFX3-202ENST00000358730 C1QTNF4Q9BXJ3 329 aa6.27□□□□□ -1.41
RFX3-202ENST00000358730 A4D1N5 150 aa6.27□□□□□ -1.41
RFX3-202ENST00000358730 TMEM238C9JI98 176 aa6.27□□□□□ -1.41
RFX3-202ENST00000358730 SMCPP49901 116 aaPredicted RBP6.27□□□□□ -1.41
RFX3-202ENST00000358730 KRTAP10-9P60411 292 aa6.27□□□□□ -1.41
RFX3-202ENST00000358730 HIST2H2BDQ6DRA6 164 aa6.27□□□□□ -1.41
RFX3-202ENST00000358730 C4orf3Q8WVX3 66 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms