RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 ODF1Q14990 250 aa8.59□□□□□ -1.03
COL11A1-202ENST00000358392 HRCT1Q6UXD1 115 aa8.59□□□□□ -1.03
COL11A1-202ENST00000358392 NDUFA11Q86Y39 141 aa8.59□□□□□ -1.03
COL11A1-202ENST00000358392 C11orf53Q8IXP5 236 aa8.59□□□□□ -1.03
COL11A1-202ENST00000358392 IGHV4-30-4P0DP06 118 aa8.58□□□□□ -1.04
COL11A1-202ENST00000358392 IGHV4-31P0DP07 118 aa8.58□□□□□ -1.04
COL11A1-202ENST00000358392 CRIPAKQ8N1N5 446 aa8.58□□□□□ -1.04
COL11A1-202ENST00000358392 NLRC5Q86WI3 1866 aa8.58□□□□□ -1.04
COL11A1-202ENST00000358392 IGLV11-55A0A075B6I3 123 aa8.58□□□□□ -1.04
COL11A1-202ENST00000358392 ROS1P08922 2347 aa8.58□□□□□ -1.04
COL11A1-202ENST00000358392 TP53TG3Q9ULZ0 132 aa8.58□□□□□ -1.04
COL11A1-202ENST00000358392 PIK3CD-AS1Q5SR53 167 aa8.58□□□□□ -1.04
COL11A1-202ENST00000358392 PLA2G2EQ9NZK7 142 aa8.58□□□□□ -1.04
COL11A1-202ENST00000358392 SNURFQ9Y675 71 aa8.58□□□□□ -1.04
COL11A1-202ENST00000358392 LYPD6BQ8NI32 183 aa8.57□□□□□ -1.04
COL11A1-202ENST00000358392 C5orf56Q8N8D9 126 aa8.57□□□□□ -1.04
COL11A1-202ENST00000358392 C10orf105Q8TEF2 133 aa8.57□□□□□ -1.04
COL11A1-202ENST00000358392 HIGD1BQ9P298 99 aa8.57□□□□□ -1.04
COL11A1-202ENST00000358392 K7ERS5 55 aa8.57□□□□□ -1.04
COL11A1-202ENST00000358392 IL15RAQ13261 267 aa8.57□□□□□ -1.04
COL11A1-202ENST00000358392 LINC00269Q8N2A0 174 aa8.57□□□□□ -1.04
COL11A1-202ENST00000358392 PLXNA2O75051 1894 aa8.57□□□□□ -1.04
COL11A1-202ENST00000358392 DCANP1Q8TF63 244 aa8.57□□□□□ -1.04
COL11A1-202ENST00000358392 DEFB113Q30KQ7 82 aa8.57□□□□□ -1.04
COL11A1-202ENST00000358392 SPATA12Q7Z6I5 190 aa8.57□□□□□ -1.04
COL11A1-202ENST00000358392 LY6G6EA0A0G2JKS1 128 aa8.56□□□□□ -1.04
COL11A1-202ENST00000358392 U3KQA8 63 aa8.56□□□□□ -1.04
COL11A1-202ENST00000358392 IGKV1D-37A0A075B6S9 117 aa8.56□□□□□ -1.04
COL11A1-202ENST00000358392 MIAQ16674 131 aa8.56□□□□□ -1.04
COL11A1-202ENST00000358392 COA6Q5JTJ3 125 aaKnown RBP8.56□□□□□ -1.04
COL11A1-202ENST00000358392 HIST2H2BDQ6DRA6 164 aa8.56□□□□□ -1.04
COL11A1-202ENST00000358392 FAM19A1Q7Z5A9 133 aa8.56□□□□□ -1.04
COL11A1-202ENST00000358392 MGAMO43451 1857 aa8.56□□□□□ -1.04
COL11A1-202ENST00000358392 NDUFC2-KCTD14E9PQ53 114 aa8.56□□□□□ -1.04
COL11A1-202ENST00000358392 PLA2G5P39877 138 aa8.56□□□□□ -1.04
COL11A1-202ENST00000358392 PRR4Q16378 134 aa8.56□□□□□ -1.04
COL11A1-202ENST00000358392 KAAG1Q9UBP8 84 aa8.56□□□□□ -1.04
COL11A1-202ENST00000358392 TP73-AS1Q9UF72 201 aa8.56□□□□□ -1.04
COL11A1-202ENST00000358392 H3BT86 120 aa8.56□□□□□ -1.04
COL11A1-202ENST00000358392 FAM240AA0A1B0GVK7 77 aa8.56□□□□□ -1.04
COL11A1-202ENST00000358392 LINC00643Q86TS7 51 aa8.55□□□□□ -1.04
COL11A1-202ENST00000358392 CXCL5P42830 114 aa8.55□□□□□ -1.04
COL11A1-202ENST00000358392 C3orf84H3BNL1 204 aa8.55□□□□□ -1.04
COL11A1-202ENST00000358392 Q8N9W7 124 aa8.55□□□□□ -1.04
COL11A1-202ENST00000358392 FRMPD3Q5JV73 1810 aa8.55□□□□□ -1.04
COL11A1-202ENST00000358392 E7EUB6 86 aa8.55□□□□□ -1.04
COL11A1-202ENST00000358392 V9GYY9 64 aa8.55□□□□□ -1.04
COL11A1-202ENST00000358392 IGFL3Q6UXB1 125 aa8.54□□□□□ -1.04
COL11A1-202ENST00000358392 KIF26AQ9ULI4 1882 aaPredicted RBP8.54□□□□□ -1.04
COL11A1-202ENST00000358392 A0A087WZ39 114 aa8.54□□□□□ -1.04
COL11A1-202ENST00000358392 FAM167A-AS1Q96KT0 104 aa8.54□□□□□ -1.04
COL11A1-202ENST00000358392 SHANK1Q9Y566 2161 aa8.54□□□□□ -1.04
COL11A1-202ENST00000358392 Q8NFD4 153 aa8.54□□□□□ -1.04
COL11A1-202ENST00000358392 A0A0J9YXY3 114 aa8.53□□□□□ -1.04
COL11A1-202ENST00000358392 TRBV6-1A0A0K0K1D8 114 aa8.53□□□□□ -1.04
COL11A1-202ENST00000358392 IGLV3-1P01715 115 aa8.53□□□□□ -1.04
COL11A1-202ENST00000358392 UNQ9165/PRO28630Q6UXU0 137 aa8.53□□□□□ -1.04
COL11A1-202ENST00000358392 FAM19A5Q7Z5A7 132 aaPredicted RBP8.53□□□□□ -1.04
COL11A1-202ENST00000358392 WT1P19544 449 aaPredicted RBP8.53□□□□□ -1.04
COL11A1-202ENST00000358392 MED13Q9UHV7 2174 aa8.53□□□□□ -1.04
COL11A1-202ENST00000358392 ZFP36P26651 326 aaKnown RBP8.53□□□□□ -1.04
COL11A1-202ENST00000358392 KLK5Q9Y337 293 aaPredicted RBP8.53□□□□□ -1.04
COL11A1-202ENST00000358392 A6NED7 52 aa8.53□□□□□ -1.04
COL11A1-202ENST00000358392 SPINK6Q6UWN8 80 aa8.52□□□□□ -1.05
COL11A1-202ENST00000358392 C1orf158Q8N1D5 194 aa8.52□□□□□ -1.05
COL11A1-202ENST00000358392 ANAPC1Q9H1A4 1944 aa8.52□□□□□ -1.05
COL11A1-202ENST00000358392 ZNF106Q9H2Y7 1883 aaKnown RBP8.52□□□□□ -1.05
COL11A1-202ENST00000358392 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.52□□□□□ -1.05
COL11A1-202ENST00000358392 CTRLP40313 264 aa8.52□□□□□ -1.05
COL11A1-202ENST00000358392 C4orf3Q8WVX3 66 aa8.52□□□□□ -1.05
COL11A1-202ENST00000358392 CACNA1GO43497 2377 aa8.51□□□□□ -1.05
COL11A1-202ENST00000358392 PRR15LQ9BU68 103 aa8.51□□□□□ -1.05
COL11A1-202ENST00000358392 KIAA1549Q9HCM3 1950 aa8.51□□□□□ -1.05
COL11A1-202ENST00000358392 ZFAND2AQ8N6M9 145 aa8.51□□□□□ -1.05
COL11A1-202ENST00000358392 REG3AQ06141 175 aa8.51□□□□□ -1.05
COL11A1-202ENST00000358392 UQCRQO14949 82 aa8.51□□□□□ -1.05
COL11A1-202ENST00000358392 LINC00467Q9BRT7 94 aa8.51□□□□□ -1.05
COL11A1-202ENST00000358392 PPDPFQ9H3Y8 114 aa8.5□□□□□ -1.05
COL11A1-202ENST00000358392 ZFAND3Q9H8U3 227 aa8.5□□□□□ -1.05
COL11A1-202ENST00000358392 DENND4CQ5VZ89 1909 aa8.5□□□□□ -1.05
COL11A1-202ENST00000358392 TNCP24821 2201 aa8.5□□□□□ -1.05
COL11A1-202ENST00000358392 FAM30AQ9NZY2 134 aa8.5□□□□□ -1.05
COL11A1-202ENST00000358392 PLXNB3Q9ULL4 1909 aa8.5□□□□□ -1.05
COL11A1-202ENST00000358392 C20orf203Q8NBC4 194 aa8.49□□□□□ -1.05
COL11A1-202ENST00000358392 CRYGDP07320 174 aa8.49□□□□□ -1.05
COL11A1-202ENST00000358392 WFDC13Q8IUB5 93 aa8.49□□□□□ -1.05
COL11A1-202ENST00000358392 SMAD5-AS1Q9Y6J3 95 aa8.49□□□□□ -1.05
COL11A1-202ENST00000358392 ADAMTS9Q9P2N4 1935 aa8.49□□□□□ -1.05
COL11A1-202ENST00000358392 Q6ZTI0 123 aa8.49□□□□□ -1.05
COL11A1-202ENST00000358392 C11orf45Q8TAV5 145 aa8.49□□□□□ -1.05
COL11A1-202ENST00000358392 NCOA6Q14686 2063 aaPredicted RBP8.49□□□□□ -1.05
COL11A1-202ENST00000358392 PDE6GP18545 87 aa8.49□□□□□ -1.05
COL11A1-202ENST00000358392 MAP6D1Q9H9H5 199 aa8.49□□□□□ -1.05
COL11A1-202ENST00000358392 XAGE1AQ9HD64 81 aa8.49□□□□□ -1.05
COL11A1-202ENST00000358392 ZNF80P51504 273 aaPredicted RBP8.48□□□□□ -1.05
COL11A1-202ENST00000358392 CHCHD10Q8WYQ3 142 aaPredicted RBP8.48□□□□□ -1.05
COL11A1-202ENST00000358392 PRO0255Q9UI72 69 aa8.48□□□□□ -1.05
COL11A1-202ENST00000358392 IGKV2-28A0A075B6P5 120 aa8.48□□□□□ -1.05
COL11A1-202ENST00000358392 IGKV2D-28P01615 120 aa8.48□□□□□ -1.05
COL11A1-202ENST00000358392 LTBP1Q14766 1721 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms