RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 MORN5Q5VZ52 161 aa3.16□□□□□ -1.9
SYNE2-204ENST00000358025 TCL1BO95988 128 aa3.16□□□□□ -1.9
SYNE2-204ENST00000358025 FRMD6-AS1P0C7T7 363 aa3.16□□□□□ -1.9
SYNE2-204ENST00000358025 DOPEY1Q5JWR5 2465 aa3.16□□□□□ -1.9
SYNE2-204ENST00000358025 LOC107984640A0A0U1RRK4 108 aa3.16□□□□□ -1.9
SYNE2-204ENST00000358025 RHPN1-AS1Q9BWJ2 59 aa3.16□□□□□ -1.9
SYNE2-204ENST00000358025 FAM236AA0A1B0GUQ0 79 aa3.16□□□□□ -1.9
SYNE2-204ENST00000358025 FAM236BA0A1B0GV22 79 aa3.16□□□□□ -1.9
SYNE2-204ENST00000358025 RPL18AQ02543 176 aaKnown RBP3.16□□□□□ -1.9
SYNE2-204ENST00000358025 COX17Q14061 63 aa3.16□□□□□ -1.9
SYNE2-204ENST00000358025 LINC01560Q8TB33 94 aa3.16□□□□□ -1.9
SYNE2-204ENST00000358025 F6UB75 175 aa3.16□□□□□ -1.9
SYNE2-204ENST00000358025 M0QY20 66 aa3.16□□□□□ -1.9
SYNE2-204ENST00000358025 POLR2KP53803 58 aaKnown RBP3.16□□□□□ -1.9
SYNE2-204ENST00000358025 FAM74A4Q5TZK3 123 aa3.16□□□□□ -1.9
SYNE2-204ENST00000358025 LINC01561Q8N1V8 128 aa3.16□□□□□ -1.9
SYNE2-204ENST00000358025 TNFRSF13BO14836 293 aaPredicted RBP3.15□□□□□ -1.9
SYNE2-204ENST00000358025 OPRPNQ99935 248 aaPredicted RBP3.15□□□□□ -1.9
SYNE2-204ENST00000358025 PRO0461Q9UI25 63 aa3.15□□□□□ -1.9
SYNE2-204ENST00000358025 Q8TAT8 98 aa3.15□□□□□ -1.9
SYNE2-204ENST00000358025 EPOPA6NHQ4 379 aa3.15□□□□□ -1.9
SYNE2-204ENST00000358025 ZNF22P17026 224 aaPredicted RBP3.15□□□□□ -1.9
SYNE2-204ENST00000358025 C20orf203Q8NBC4 194 aa3.15□□□□□ -1.9
SYNE2-204ENST00000358025 IGLV2-18A0A075B6J9 118 aa3.15□□□□□ -1.9
SYNE2-204ENST00000358025 ZNF80P51504 273 aaPredicted RBP3.15□□□□□ -1.9
SYNE2-204ENST00000358025 MUC22E2RYF6 1773 aaPredicted RBP3.15□□□□□ -1.9
SYNE2-204ENST00000358025 E7EQL1 145 aa3.15□□□□□ -1.9
SYNE2-204ENST00000358025 ZFAND3Q9H8U3 227 aa3.15□□□□□ -1.9
SYNE2-204ENST00000358025 PPIFP30405 207 aaKnown RBP3.15□□□□□ -1.9
SYNE2-204ENST00000358025 FANCD2OSQ96PS1 177 aa3.15□□□□□ -1.9
SYNE2-204ENST00000358025 C6orf226Q5I0X4 101 aa3.15□□□□□ -1.91
SYNE2-204ENST00000358025 SMIM26A0A096LP01 95 aa3.15□□□□□ -1.91
SYNE2-204ENST00000358025 MRPS12O15235 138 aaKnown RBP3.15□□□□□ -1.91
SYNE2-204ENST00000358025 CRYGAP11844 174 aa3.15□□□□□ -1.91
SYNE2-204ENST00000358025 ZNF503-AS2A6NEH8 195 aa3.15□□□□□ -1.91
SYNE2-204ENST00000358025 SMKR1H3BMG3 65 aa3.15□□□□□ -1.91
SYNE2-204ENST00000358025 ZFAND2AQ8N6M9 145 aa3.15□□□□□ -1.91
SYNE2-204ENST00000358025 COL4A2P08572 1712 aa3.15□□□□□ -1.91
SYNE2-204ENST00000358025 CHD7Q9P2D1 2997 aa3.15□□□□□ -1.91
SYNE2-204ENST00000358025 ZNRF2Q8NHG8 242 aa3.15□□□□□ -1.91
SYNE2-204ENST00000358025 LYNX1G3V0Z9 82 aa3.15□□□□□ -1.91
SYNE2-204ENST00000358025 LYNX1P0DP58 116 aa3.15□□□□□ -1.91
SYNE2-204ENST00000358025 WIPF1O43516 503 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 C20orf173Q96LM9 149 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 BDP1A6H8Y1 2624 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 A0A0U1RRA0 63 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 PKIGQ9Y2B9 76 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 APRG1Q8IVJ8 170 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 LST1O00453 97 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 SYNJ2BPP57105 145 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 KNCNA6PVL3 124 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 Q6JHZ5 121 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 STHQ8IWL8 128 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 LINC00527Q9UJ94 153 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 MRPL36Q9P0J6 103 aaKnown RBP3.14□□□□□ -1.91
SYNE2-204ENST00000358025 B4DSR2 109 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 INSP01308 110 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 DUX5Q96PT3 197 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 EIF4EBP3O60516 100 aaPredicted RBP3.14□□□□□ -1.91
SYNE2-204ENST00000358025 PLA2G2CQ5R387 149 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 ITLN2Q8WWU7 325 aaPredicted RBP3.14□□□□□ -1.91
SYNE2-204ENST00000358025 POM121L12Q8N7R1 296 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 TMEM263Q8WUH6 116 aaKnown RBP3.14□□□□□ -1.91
SYNE2-204ENST00000358025 C17orf77Q96MU5 243 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 ABCA2Q9BZC7 2435 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 PAX4O43316 350 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 COX6B1P14854 86 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 PIP4P1Q86T03 277 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 MUSTN1Q8IVN3 82 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 LINC01587Q99440 93 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 CD24P25063 80 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 TMEM61Q8N0U2 210 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 IGHV7-4-1A0A0J9YVY3 117 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 IGF1P05019 195 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 PIP4P2Q8N4L2 257 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 Q9H8V8 135 aa3.14□□□□□ -1.91
SYNE2-204ENST00000358025 TRAV7A0A075B6U4 112 aa3.13□□□□□ -1.91
SYNE2-204ENST00000358025 SAA4P35542 130 aa3.13□□□□□ -1.91
SYNE2-204ENST00000358025 LOXL1Q08397 574 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-204ENST00000358025 TCF15Q12870 199 aa3.13□□□□□ -1.91
SYNE2-204ENST00000358025 MAPK1IP1LQ8NDC0 245 aa3.13□□□□□ -1.91
SYNE2-204ENST00000358025 F8WDY8 70 aa3.13□□□□□ -1.91
SYNE2-204ENST00000358025 NDUFB1O75438 58 aa3.13□□□□□ -1.91
SYNE2-204ENST00000358025 C10orf105Q8TEF2 133 aa3.13□□□□□ -1.91
SYNE2-204ENST00000358025 PIEZO1Q92508 2521 aa3.13□□□□□ -1.91
SYNE2-204ENST00000358025 ZNF462Q96JM2 2506 aa3.13□□□□□ -1.91
SYNE2-204ENST00000358025 A0A0G2JNJ9 132 aa3.13□□□□□ -1.91
SYNE2-204ENST00000358025 URB1-AS1Q96HZ7 61 aa3.13□□□□□ -1.91
SYNE2-204ENST00000358025 Q9UFV3 132 aa3.13□□□□□ -1.91
SYNE2-204ENST00000358025 XGP55808 180 aa3.13□□□□□ -1.91
SYNE2-204ENST00000358025 KLLNB2CW77 178 aa3.13□□□□□ -1.91
SYNE2-204ENST00000358025 IGHV3-30-3P0DP02 117 aa3.13□□□□□ -1.91
SYNE2-204ENST00000358025 SERP1Q9Y6X1 66 aa3.13□□□□□ -1.91
SYNE2-204ENST00000358025 FLG2Q5D862 2391 aaPredicted RBP3.13□□□□□ -1.91
SYNE2-204ENST00000358025 TPSG1Q9NRR2 321 aa3.13□□□□□ -1.91
SYNE2-204ENST00000358025 MRPL55Q7Z7F7 128 aaKnown RBP3.13□□□□□ -1.91
SYNE2-204ENST00000358025 IGHV7-81A0A0B4J1V7 117 aa3.13□□□□□ -1.91
SYNE2-204ENST00000358025 Q8N9W7 124 aa3.13□□□□□ -1.91
SYNE2-204ENST00000358025 SS18L2Q9UHA2 77 aa3.13□□□□□ -1.91
SYNE2-204ENST00000358025 TRANK1O15050 2925 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms