RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 VCYO14598 125 aa15.17■□□□□ 0.02
COL13A1-202ENST00000357811 RRN3P1Q2M238 152 aa15.17■□□□□ 0.02
COL13A1-202ENST00000357811 LOC107984156A0A0G2JMH3 177 aa15.17■□□□□ 0.02
COL13A1-202ENST00000357811 A0A0J9YX75 114 aa15.17■□□□□ 0.02
COL13A1-202ENST00000357811 HOXA3O43365 443 aaPredicted RBP15.17■□□□□ 0.02
COL13A1-202ENST00000357811 ZNF876PQ49A33 203 aa15.17■□□□□ 0.02
COL13A1-202ENST00000357811 ARL17AQ8IVW1 177 aa15.17■□□□□ 0.02
COL13A1-202ENST00000357811 ZNRF2Q8NHG8 242 aa15.17■□□□□ 0.02
COL13A1-202ENST00000357811 ZNF469Q96JG9 3925 aaPredicted RBP15.17■□□□□ 0.02
COL13A1-202ENST00000357811 KNCNA6PVL3 124 aa15.16■□□□□ 0.02
COL13A1-202ENST00000357811 F8W1H4 67 aa15.16■□□□□ 0.02
COL13A1-202ENST00000357811 P0DMU3 169 aa15.16■□□□□ 0.02
COL13A1-202ENST00000357811 FAM231AP0DMU4 169 aa15.16■□□□□ 0.02
COL13A1-202ENST00000357811 FAM231CP0DMU5 169 aa15.16■□□□□ 0.02
COL13A1-202ENST00000357811 MORN3Q6PF18 240 aaPredicted RBP15.16■□□□□ 0.02
COL13A1-202ENST00000357811 USP24Q9UPU5 2620 aa15.16■□□□□ 0.02
COL13A1-202ENST00000357811 NXPH4O95158 308 aa15.15■□□□□ 0.02
COL13A1-202ENST00000357811 PPP1R17O96001 155 aa15.15■□□□□ 0.02
COL13A1-202ENST00000357811 PROK1P58294 105 aa15.15■□□□□ 0.02
COL13A1-202ENST00000357811 PMVKQ15126 192 aa15.15■□□□□ 0.02
COL13A1-202ENST00000357811 TAL2Q16559 108 aa15.15■□□□□ 0.02
COL13A1-202ENST00000357811 K7EMT4 169 aa15.15■□□□□ 0.02
COL13A1-202ENST00000357811 SPATA25Q9BR10 227 aa15.15■□□□□ 0.02
COL13A1-202ENST00000357811 HOXD3P31249 432 aaPredicted RBP15.14■□□□□ 0.01
COL13A1-202ENST00000357811 GAGE13Q4V321 117 aa15.14■□□□□ 0.01
COL13A1-202ENST00000357811 A0A1B0GWB2 263 aa15.13■□□□□ 0.01
COL13A1-202ENST00000357811 COX6B1P14854 86 aa15.13■□□□□ 0.01
COL13A1-202ENST00000357811 IGHV1OR15-1A0A075B7D0 117 aa15.13■□□□□ 0.01
COL13A1-202ENST00000357811 RNASE13Q5GAN3 156 aaKnown RBP15.13■□□□□ 0.01
COL13A1-202ENST00000357811 Q9UF83 564 aa15.13■□□□□ 0.01
COL13A1-202ENST00000357811 M0QY20 66 aa15.12■□□□□ 0.01
COL13A1-202ENST00000357811 BRI3O95415 125 aa15.12■□□□□ 0.01
COL13A1-202ENST00000357811 KHDC1LQ5JSQ8 128 aa15.12■□□□□ 0.01
COL13A1-202ENST00000357811 MTORP42345 2549 aa15.12■□□□□ 0.01
COL13A1-202ENST00000357811 K7EQG2 157 aa15.12■□□□□ 0.01
COL13A1-202ENST00000357811 ZNF580Q9UK33 172 aa15.12■□□□□ 0.01
COL13A1-202ENST00000357811 TRBV7-9A0A0J9YWB2 115 aa15.12■□□□□ 0.01
COL13A1-202ENST00000357811 SLURP1P55000 103 aa15.12■□□□□ 0.01
COL13A1-202ENST00000357811 RBMY1A1P0DJD3 496 aaKnown RBP15.11■□□□□ 0.01
COL13A1-202ENST00000357811 RBMY1CP0DJD4 496 aa15.11■□□□□ 0.01
COL13A1-202ENST00000357811 RBMY1FQ15415 496 aaKnown RBP15.11■□□□□ 0.01
COL13A1-202ENST00000357811 CEMP1Q6PRD7 247 aaPredicted RBP15.11■□□□□ 0.01
COL13A1-202ENST00000357811 C9orf85Q96MD7 179 aa15.11■□□□□ 0.01
COL13A1-202ENST00000357811 ACANP16112 2415 aa15.1■□□□□ 0.01
COL13A1-202ENST00000357811 POM121L12Q8N7R1 296 aa15.1■□□□□ 0.01
COL13A1-202ENST00000357811 ZNF418Q8TF45 676 aaPredicted RBP15.1■□□□□ 0.01
COL13A1-202ENST00000357811 PSMB2P49721 201 aa15.09■□□□□ 0.01
COL13A1-202ENST00000357811 HERVK_113P61574 105 aa15.09■□□□□ 0.01
COL13A1-202ENST00000357811 TCTEX1D4Q5JR98 221 aa15.09■□□□□ 0.01
COL13A1-202ENST00000357811 LINC01356Q8N9X3 169 aa15.09■□□□□ 0.01
COL13A1-202ENST00000357811 SYT8Q8NBV8 401 aa15.09■□□□□ 0.01
COL13A1-202ENST00000357811 A0A0J9YY99 117 aa15.09■□□□□ 0.01
COL13A1-202ENST00000357811 TRBV27A0A0K0K1C4 114 aa15.09■□□□□ 0.01
COL13A1-202ENST00000357811 DEFB131AP59861 70 aa15.09■□□□□ 0.01
COL13A1-202ENST00000357811 ADARB2-AS1A8MUL3 147 aa15.09■□□□□ 0.01
COL13A1-202ENST00000357811 LGALS9O00182 355 aa15.09■□□□□ 0.01
COL13A1-202ENST00000357811 H7C2G1 150 aa15.08■□□□□ 0
COL13A1-202ENST00000357811 SPINK8P0C7L1 97 aa15.08■□□□□ 0
COL13A1-202ENST00000357811 A0A0J9YXV3 536 aa15.07■□□□□ 0
COL13A1-202ENST00000357811 TSPAN13O95857 204 aa15.07■□□□□ 0
COL13A1-202ENST00000357811 PTH2Q96A98 100 aa15.06■□□□□ 0
COL13A1-202ENST00000357811 J3QQQ9 107 aa15.06■□□□□ 0
COL13A1-202ENST00000357811 LGALS3P17931 250 aaKnown RBP15.05■□□□□ 0
COL13A1-202ENST00000357811 TMEM141Q96I45 108 aa15.05■□□□□ 0
COL13A1-202ENST00000357811 TIMM17AQ99595 171 aa15.05■□□□□ 0
COL13A1-202ENST00000357811 GATA3P23771 443 aa15.05■□□□□ -0
COL13A1-202ENST00000357811 KRTAP10-9P60411 292 aa15.05■□□□□ -0
COL13A1-202ENST00000357811 C11orf44Q8N8P7 122 aa15.05■□□□□ -0
COL13A1-202ENST00000357811 A6NJY4 79 aa15.04■□□□□ -0
COL13A1-202ENST00000357811 MT-ATP8P03928 68 aa15.04■□□□□ -0
COL13A1-202ENST00000357811 RAX2Q96IS3 184 aa15.04■□□□□ -0
COL13A1-202ENST00000357811 VPREB3Q9UKI3 123 aa15.04■□□□□ -0
COL13A1-202ENST00000357811 TRPT1Q86TN4 253 aaKnown RBP15.03■□□□□ -0
COL13A1-202ENST00000357811 AKAP9Q99996 3911 aa15.03■□□□□ -0
COL13A1-202ENST00000357811 NBPF19A0A087WUL8 3843 aa15.03■□□□□ -0
COL13A1-202ENST00000357811 SPXQ9BT56 116 aa15.03■□□□□ -0
COL13A1-202ENST00000357811 ZNF702PQ9H963 129 aa15.03■□□□□ -0
COL13A1-202ENST00000357811 PRO0461Q9UI25 63 aa15.03■□□□□ -0
COL13A1-202ENST00000357811 TRAV2A0A0B4J234 112 aa15.03■□□□□ -0
COL13A1-202ENST00000357811 SS18L2Q9UHA2 77 aa15.03■□□□□ -0
COL13A1-202ENST00000357811 APCP25054 2843 aa15.03■□□□□ -0
COL13A1-202ENST00000357811 ITPR3Q14573 2671 aa15.02■□□□□ -0
COL13A1-202ENST00000357811 UBE2D1P51668 147 aa15.02■□□□□ -0
COL13A1-202ENST00000357811 FLNAP21333 2647 aaKnown RBP15.02□□□□□ -0.01
COL13A1-202ENST00000357811 IGHV3-38A0A0C4DH36 116 aa15.02□□□□□ -0.01
COL13A1-202ENST00000357811 VCX2Q9H322 139 aa15.02□□□□□ -0.01
COL13A1-202ENST00000357811 TRBV6-5A0A0K0K1A5 114 aa15.01□□□□□ -0.01
COL13A1-202ENST00000357811 PAPPA-AS1Q5QFB9 102 aa15.01□□□□□ -0.01
COL13A1-202ENST00000357811 NDUFA11Q86Y39 141 aa15.01□□□□□ -0.01
COL13A1-202ENST00000357811 C20orf203Q8NBC4 194 aa15.01□□□□□ -0.01
COL13A1-202ENST00000357811 CFC1BP0CG36 223 aa15.01□□□□□ -0.01
COL13A1-202ENST00000357811 CFC1P0CG37 223 aa15.01□□□□□ -0.01
COL13A1-202ENST00000357811 RPL32P62910 135 aaKnown RBP15.01□□□□□ -0.01
COL13A1-202ENST00000357811 RNF183Q96D59 192 aa15.01□□□□□ -0.01
COL13A1-202ENST00000357811 I3L3M4 83 aa15□□□□□ -0.01
COL13A1-202ENST00000357811 FOXI1Q12951 378 aa15□□□□□ -0.01
COL13A1-202ENST00000357811 LINC01619G3V211 115 aa15□□□□□ -0.01
COL13A1-202ENST00000357811 IGHV3-30P01768 117 aa15□□□□□ -0.01
COL13A1-202ENST00000357811 IGHV3-30-5P0DP03 117 aa15□□□□□ -0.01
COL13A1-202ENST00000357811 Q6ZSN1 163 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms