RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 MBD3L1Q8WWY6 194 aa6.64□□□□□ -1.35
LINC01560-201ENST00000357412 MUC21A0A0G2JKD1 596 aa6.63□□□□□ -1.35
LINC01560-201ENST00000357412 MUC21A0A140T8X8 626 aa6.63□□□□□ -1.35
LINC01560-201ENST00000357412 SCO2A0A1W2PP80 73 aa6.63□□□□□ -1.35
LINC01560-201ENST00000357412 ZNF56Q15929 161 aa6.63□□□□□ -1.35
LINC01560-201ENST00000357412 ANKRD39Q53RE8 183 aa6.63□□□□□ -1.35
LINC01560-201ENST00000357412 NTM-AS1Q6ZSK4 140 aa6.63□□□□□ -1.35
LINC01560-201ENST00000357412 BAGE2Q86Y30 109 aa6.63□□□□□ -1.35
LINC01560-201ENST00000357412 SFT2D1Q8WV19 159 aa6.63□□□□□ -1.35
LINC01560-201ENST00000357412 C1orf43Q9BWL3 253 aa6.63□□□□□ -1.35
LINC01560-201ENST00000357412 UBR4Q5T4S7 5183 aa6.63□□□□□ -1.35
LINC01560-201ENST00000357412 A0A1B0GV50 99 aa6.62□□□□□ -1.35
LINC01560-201ENST00000357412 IGLV2-8P01709 118 aa6.62□□□□□ -1.35
LINC01560-201ENST00000357412 CRPP02741 224 aa6.62□□□□□ -1.35
LINC01560-201ENST00000357412 S100A9P06702 114 aaKnown RBP6.62□□□□□ -1.35
LINC01560-201ENST00000357412 OR5AL1P0C617 328 aa6.62□□□□□ -1.35
LINC01560-201ENST00000357412 C14orf177Q52M58 125 aa6.62□□□□□ -1.35
LINC01560-201ENST00000357412 FAM213BQ8TBF2 198 aa6.62□□□□□ -1.35
LINC01560-201ENST00000357412 ZNF471Q9BX82 626 aaPredicted RBP6.62□□□□□ -1.35
LINC01560-201ENST00000357412 VAX2Q9UIW0 290 aa6.62□□□□□ -1.35
LINC01560-201ENST00000357412 KIF25-AS1Q9Y6Z4 181 aa6.62□□□□□ -1.35
LINC01560-201ENST00000357412 USP17L23D6RBM5 183 aa6.61□□□□□ -1.35
LINC01560-201ENST00000357412 ANGP03950 147 aaKnown RBP6.61□□□□□ -1.35
LINC01560-201ENST00000357412 SPANXN1Q5VSR9 72 aa6.61□□□□□ -1.35
LINC01560-201ENST00000357412 KCNRGQ8N5I3 272 aa6.61□□□□□ -1.35
LINC01560-201ENST00000357412 CHCHD5Q9BSY4 110 aa6.61□□□□□ -1.35
LINC01560-201ENST00000357412 PRR34Q9NV39 138 aa6.61□□□□□ -1.35
LINC01560-201ENST00000357412 UMAD1C9J7I0 102 aa6.6□□□□□ -1.35
LINC01560-201ENST00000357412 F5H697 171 aa6.6□□□□□ -1.35
LINC01560-201ENST00000357412 OXTP01178 125 aa6.6□□□□□ -1.35
LINC01560-201ENST00000357412 PRSS1P07477 247 aa6.6□□□□□ -1.35
LINC01560-201ENST00000357412 SSTP61278 116 aa6.6□□□□□ -1.35
LINC01560-201ENST00000357412 RBX1P62877 108 aa6.6□□□□□ -1.35
LINC01560-201ENST00000357412 ZNF345Q14585 488 aa6.6□□□□□ -1.35
LINC01560-201ENST00000357412 MIAQ16674 131 aa6.6□□□□□ -1.35
LINC01560-201ENST00000357412 RGS21Q2M5E4 152 aa6.6□□□□□ -1.35
LINC01560-201ENST00000357412 KRTAP26-1Q6PEX3 210 aa6.6□□□□□ -1.35
LINC01560-201ENST00000357412 TMUB2Q71RG4 321 aa6.6□□□□□ -1.35
LINC01560-201ENST00000357412 PFDN1O60925 122 aa6.59□□□□□ -1.35
LINC01560-201ENST00000357412 HLA-DQA1P01909 254 aa6.59□□□□□ -1.35
LINC01560-201ENST00000357412 PKIAP61925 76 aa6.59□□□□□ -1.35
LINC01560-201ENST00000357412 GAGE6Q13070 117 aa6.59□□□□□ -1.35
LINC01560-201ENST00000357412 TMEM97Q5BJF2 176 aa6.59□□□□□ -1.35
LINC01560-201ENST00000357412 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.59□□□□□ -1.35
LINC01560-201ENST00000357412 DERL1Q9BUN8 251 aa6.59□□□□□ -1.35
LINC01560-201ENST00000357412 M0QY20 66 aa6.58□□□□□ -1.36
LINC01560-201ENST00000357412 H2AFB1P0C5Y9 115 aa6.58□□□□□ -1.36
LINC01560-201ENST00000357412 RPL35P42766 123 aaKnown RBP6.58□□□□□ -1.36
LINC01560-201ENST00000357412 IQCJQ1A5X6 159 aa6.58□□□□□ -1.36
LINC01560-201ENST00000357412 SERTAD4-AS1Q5TG53 156 aa6.58□□□□□ -1.36
LINC01560-201ENST00000357412 DGAT2L7PQ6IED9 249 aa6.58□□□□□ -1.36
LINC01560-201ENST00000357412 CLPSL2Q6UWE3 100 aa6.58□□□□□ -1.36
LINC01560-201ENST00000357412 LINC00269Q8N2A0 174 aa6.58□□□□□ -1.36
LINC01560-201ENST00000357412 C9orf163Q8N9P6 203 aa6.58□□□□□ -1.36
LINC01560-201ENST00000357412 AP1S3Q96PC3 154 aa6.58□□□□□ -1.36
LINC01560-201ENST00000357412 TRBV25-1A0A075B6N4 114 aa6.57□□□□□ -1.36
LINC01560-201ENST00000357412 HMSDA8MTL9 139 aa6.57□□□□□ -1.36
LINC01560-201ENST00000357412 PANO1I0J062 215 aa6.57□□□□□ -1.36
LINC01560-201ENST00000357412 BCL2L11O43521 198 aa6.57□□□□□ -1.36
LINC01560-201ENST00000357412 IGLC6P0CF74 106 aa6.57□□□□□ -1.36
LINC01560-201ENST00000357412 SMIM17P0DL12 118 aa6.57□□□□□ -1.36
LINC01560-201ENST00000357412 GZMBP10144 247 aa6.57□□□□□ -1.36
LINC01560-201ENST00000357412 HNRNPA3P51991 378 aaKnown RBP6.57□□□□□ -1.36
LINC01560-201ENST00000357412 RPL37AP61513 92 aaKnown RBP6.57□□□□□ -1.36
LINC01560-201ENST00000357412 CCL20P78556 96 aa6.57□□□□□ -1.36
LINC01560-201ENST00000357412 SDIM1Q6ZPB5 146 aa6.57□□□□□ -1.36
LINC01560-201ENST00000357412 C11orf52Q96A22 123 aa6.57□□□□□ -1.36
LINC01560-201ENST00000357412 DAZAP1Q96EP5 407 aaKnown RBP6.57□□□□□ -1.36
LINC01560-201ENST00000357412 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.57□□□□□ -1.36
LINC01560-201ENST00000357412 IGHV1-24A0A0C4DH33 117 aa6.56□□□□□ -1.36
LINC01560-201ENST00000357412 A0A0D9SG52 128 aa6.56□□□□□ -1.36
LINC01560-201ENST00000357412 SUMO4Q6EEV6 95 aa6.56□□□□□ -1.36
LINC01560-201ENST00000357412 C20orf203Q8NBC4 194 aa6.56□□□□□ -1.36
LINC01560-201ENST00000357412 KANTRA0A1W2PQU2 76 aa6.55□□□□□ -1.36
LINC01560-201ENST00000357412 C19orf71A6NCJ1 209 aa6.55□□□□□ -1.36
LINC01560-201ENST00000357412 MGPP08493 103 aa6.55□□□□□ -1.36
LINC01560-201ENST00000357412 REG3AQ06141 175 aa6.55□□□□□ -1.36
LINC01560-201ENST00000357412 CENPWQ5EE01 88 aa6.55□□□□□ -1.36
LINC01560-201ENST00000357412 FER1L6-AS1Q8NA97 138 aa6.55□□□□□ -1.36
LINC01560-201ENST00000357412 CLRN3Q8NCR9 226 aa6.55□□□□□ -1.36
LINC01560-201ENST00000357412 OR2D3Q8NGH3 330 aa6.55□□□□□ -1.36
LINC01560-201ENST00000357412 TPPP3Q9BW30 176 aa6.55□□□□□ -1.36
LINC01560-201ENST00000357412 GFRA4Q9GZZ7 299 aa6.55□□□□□ -1.36
LINC01560-201ENST00000357412 GNG13Q9P2W3 67 aa6.55□□□□□ -1.36
LINC01560-201ENST00000357412 IGLV4-60A0A075B6I1 120 aa6.54□□□□□ -1.36
LINC01560-201ENST00000357412 IGLV10-54A0A075B6I4 117 aa6.54□□□□□ -1.36
LINC01560-201ENST00000357412 TRAV1-1A0A0B4J248 108 aa6.54□□□□□ -1.36
LINC01560-201ENST00000357412 SLPIP03973 132 aa6.54□□□□□ -1.36
LINC01560-201ENST00000357412 NKX2-5P52952 324 aaPredicted RBP6.54□□□□□ -1.36
LINC01560-201ENST00000357412 RPS20P60866 119 aaKnown RBP6.54□□□□□ -1.36
LINC01560-201ENST00000357412 CNBPP62633 177 aaKnown RBP6.54□□□□□ -1.36
LINC01560-201ENST00000357412 EIF5AP63241 154 aaKnown RBP6.54□□□□□ -1.36
LINC01560-201ENST00000357412 MANBALQ9NQG1 85 aa6.54□□□□□ -1.36
LINC01560-201ENST00000357412 PKHD1L1Q86WI1 4243 aa6.53□□□□□ -1.36
LINC01560-201ENST00000357412 TRAV8-4A0A0B4J246 113 aa6.53□□□□□ -1.36
LINC01560-201ENST00000357412 A0A1B0GUV1 79 aa6.53□□□□□ -1.36
LINC01560-201ENST00000357412 RAB19A4D1S5 217 aa6.53□□□□□ -1.36
LINC01560-201ENST00000357412 H7C1H1 209 aa6.53□□□□□ -1.36
LINC01560-201ENST00000357412 P01737 135 aa6.53□□□□□ -1.36
LINC01560-201ENST00000357412 CACNG7P62955 275 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms