RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 IGHG2P01859 326 aa11.9□□□□□ -0.5
TRAPPC11-202ENST00000357207 C22orf34Q6ZV56 151 aa11.9□□□□□ -0.5
TRAPPC11-202ENST00000357207 SIRPDQ9H106 197 aa11.9□□□□□ -0.5
TRAPPC11-202ENST00000357207 SPANXB1Q9NS25 103 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC11-202ENST00000357207 NUP210LQ5VU65 1888 aa11.9□□□□□ -0.5
TRAPPC11-202ENST00000357207 NAV2Q8IVL1 2488 aa11.9□□□□□ -0.51
TRAPPC11-202ENST00000357207 TRAV4A0A0B4J268 109 aa11.89□□□□□ -0.51
TRAPPC11-202ENST00000357207 LGALS9O00182 355 aa11.89□□□□□ -0.51
TRAPPC11-202ENST00000357207 VSIG2Q96IQ7 327 aa11.89□□□□□ -0.51
TRAPPC11-202ENST00000357207 Q96MF0 132 aa11.89□□□□□ -0.51
TRAPPC11-202ENST00000357207 IGHV1-58A0A0C4DH39 117 aa11.89□□□□□ -0.51
TRAPPC11-202ENST00000357207 CLEC2BQ92478 149 aa11.89□□□□□ -0.51
TRAPPC11-202ENST00000357207 CRYGBP07316 175 aa11.89□□□□□ -0.51
TRAPPC11-202ENST00000357207 RBMY1FQ15415 496 aaKnown RBP11.89□□□□□ -0.51
TRAPPC11-202ENST00000357207 CCDC140Q96MF4 163 aa11.89□□□□□ -0.51
TRAPPC11-202ENST00000357207 TRAV25A0A0B4J276 109 aa11.89□□□□□ -0.51
TRAPPC11-202ENST00000357207 Q6ZUT4 128 aa11.88□□□□□ -0.51
TRAPPC11-202ENST00000357207 C2orf91Q6ZV80 131 aa11.88□□□□□ -0.51
TRAPPC11-202ENST00000357207 TRBV12-3P01733 135 aa11.88□□□□□ -0.51
TRAPPC11-202ENST00000357207 MAPKAPK5-AS1Q8N8E1 139 aa11.88□□□□□ -0.51
TRAPPC11-202ENST00000357207 DAZ2Q13117 558 aaKnown RBP11.88□□□□□ -0.51
TRAPPC11-202ENST00000357207 DAZ4Q86SG3 579 aaKnown RBP11.88□□□□□ -0.51
TRAPPC11-202ENST00000357207 DAZ3Q9NR90 486 aaKnown RBP11.88□□□□□ -0.51
TRAPPC11-202ENST00000357207 HIVEP2P31629 2446 aa11.87□□□□□ -0.51
TRAPPC11-202ENST00000357207 IGHV4-30-2A0A087WSY4 118 aa11.87□□□□□ -0.51
TRAPPC11-202ENST00000357207 IGLV2-11P01706 119 aa11.87□□□□□ -0.51
TRAPPC11-202ENST00000357207 NEXN-AS1Q8NBZ9 246 aa11.87□□□□□ -0.51
TRAPPC11-202ENST00000357207 U3KQK5 164 aa11.87□□□□□ -0.51
TRAPPC11-202ENST00000357207 A0A0J9YX75 114 aa11.87□□□□□ -0.51
TRAPPC11-202ENST00000357207 ATOX1O00244 68 aa11.86□□□□□ -0.51
TRAPPC11-202ENST00000357207 NKAPP1Q8N9T2 125 aa11.86□□□□□ -0.51
TRAPPC11-202ENST00000357207 TRBV7-3A0A075B6L6 115 aa11.86□□□□□ -0.51
TRAPPC11-202ENST00000357207 IGKV3D-7A0A0C4DH55 119 aa11.86□□□□□ -0.51
TRAPPC11-202ENST00000357207 NBL1P41271 181 aa11.86□□□□□ -0.51
TRAPPC11-202ENST00000357207 ADORA2A-AS1P86434 159 aa11.86□□□□□ -0.51
TRAPPC11-202ENST00000357207 FBXL19-AS1Q494R0 122 aa11.86□□□□□ -0.51
TRAPPC11-202ENST00000357207 ODF3BA8MYP8 253 aa11.85□□□□□ -0.51
TRAPPC11-202ENST00000357207 K7EQD1 137 aa11.85□□□□□ -0.51
TRAPPC11-202ENST00000357207 ABCA2Q9BZC7 2435 aa11.85□□□□□ -0.51
TRAPPC11-202ENST00000357207 A0A1B0GX51 115 aa11.85□□□□□ -0.51
TRAPPC11-202ENST00000357207 LINC01548A6NM66 108 aa11.85□□□□□ -0.51
TRAPPC11-202ENST00000357207 CENPFP49454 3210 aa11.85□□□□□ -0.51
TRAPPC11-202ENST00000357207 IGHV4OR15-8A0A075B7B6 117 aa11.85□□□□□ -0.51
TRAPPC11-202ENST00000357207 A0A087WW49 117 aa11.85□□□□□ -0.51
TRAPPC11-202ENST00000357207 CCL24O00175 119 aa11.85□□□□□ -0.51
TRAPPC11-202ENST00000357207 ARHGAP32A7KAX9 2087 aa11.85□□□□□ -0.51
TRAPPC11-202ENST00000357207 IGF2RP11717 2491 aa11.85□□□□□ -0.51
TRAPPC11-202ENST00000357207 HIVEP3Q5T1R4 2406 aa11.85□□□□□ -0.51
TRAPPC11-202ENST00000357207 MT-ATP8P03928 68 aa11.85□□□□□ -0.51
TRAPPC11-202ENST00000357207 HIST2H2BCQ6DN03 193 aa11.85□□□□□ -0.51
TRAPPC11-202ENST00000357207 COX7B2Q8TF08 81 aa11.85□□□□□ -0.51
TRAPPC11-202ENST00000357207 RNF185Q96GF1 192 aa11.85□□□□□ -0.51
TRAPPC11-202ENST00000357207 C10orf105Q8TEF2 133 aa11.84□□□□□ -0.51
TRAPPC11-202ENST00000357207 Q8N976 141 aa11.84□□□□□ -0.51
TRAPPC11-202ENST00000357207 RNF183Q96D59 192 aa11.84□□□□□ -0.51
TRAPPC11-202ENST00000357207 A0A0J9YXY3 114 aa11.83□□□□□ -0.52
TRAPPC11-202ENST00000357207 A0A0J9YY99 117 aa11.83□□□□□ -0.52
TRAPPC11-202ENST00000357207 CEMP1Q6PRD7 247 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC11-202ENST00000357207 Q71RC1 249 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC11-202ENST00000357207 C10orf142B7Z368 130 aa11.83□□□□□ -0.52
TRAPPC11-202ENST00000357207 ATG2AQ2TAZ0 1938 aa11.82□□□□□ -0.52
TRAPPC11-202ENST00000357207 RBM3P98179 157 aaKnown RBP11.82□□□□□ -0.52
TRAPPC11-202ENST00000357207 Q8NA96 180 aa11.82□□□□□ -0.52
TRAPPC11-202ENST00000357207 LECT2O14960 151 aa11.82□□□□□ -0.52
TRAPPC11-202ENST00000357207 IGF1P05019 195 aa11.82□□□□□ -0.52
TRAPPC11-202ENST00000357207 MIAQ16674 131 aa11.82□□□□□ -0.52
TRAPPC11-202ENST00000357207 C3orf56Q8N813 242 aa11.82□□□□□ -0.52
TRAPPC11-202ENST00000357207 APOC4P55056 127 aa11.81□□□□□ -0.52
TRAPPC11-202ENST00000357207 Q6ZQT7 251 aa11.81□□□□□ -0.52
TRAPPC11-202ENST00000357207 MUC22E2RYF6 1773 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC11-202ENST00000357207 PIEZO1Q92508 2521 aa11.8□□□□□ -0.52
TRAPPC11-202ENST00000357207 MIR7-3HGQ8N6C7 128 aa11.8□□□□□ -0.52
TRAPPC11-202ENST00000357207 ZFAND3Q9H8U3 227 aa11.8□□□□□ -0.52
TRAPPC11-202ENST00000357207 SMAD5-AS1Q9Y6J3 95 aa11.8□□□□□ -0.52
TRAPPC11-202ENST00000357207 NCOR2Q9Y618 2525 aa11.8□□□□□ -0.52
TRAPPC11-202ENST00000357207 LINC00643Q86TS7 51 aa11.8□□□□□ -0.52
TRAPPC11-202ENST00000357207 C16orf74Q96GX8 76 aa11.8□□□□□ -0.52
TRAPPC11-202ENST00000357207 TMEM89A2RUT3 159 aa11.79□□□□□ -0.52
TRAPPC11-202ENST00000357207 LY6LH3BQJ8 138 aa11.79□□□□□ -0.52
TRAPPC11-202ENST00000357207 GYPEP15421 78 aa11.79□□□□□ -0.52
TRAPPC11-202ENST00000357207 NFE4Q86UQ8 179 aa11.79□□□□□ -0.52
TRAPPC11-202ENST00000357207 TNRC6BQ9UPQ9 1833 aaKnown RBP11.79□□□□□ -0.52
TRAPPC11-202ENST00000357207 PSCAO43653 123 aa11.79□□□□□ -0.52
TRAPPC11-202ENST00000357207 LMO4P61968 165 aa11.79□□□□□ -0.52
TRAPPC11-202ENST00000357207 TMEM61Q8N0U2 210 aa11.79□□□□□ -0.52
TRAPPC11-202ENST00000357207 DSCAMO60469 2012 aa11.79□□□□□ -0.52
TRAPPC11-202ENST00000357207 ZFAND2AQ8N6M9 145 aa11.79□□□□□ -0.52
TRAPPC11-202ENST00000357207 EBI3Q14213 229 aa11.78□□□□□ -0.52
TRAPPC11-202ENST00000357207 TEX49A0A1B0GTD5 131 aa11.78□□□□□ -0.52
TRAPPC11-202ENST00000357207 FSTL3O95633 263 aa11.78□□□□□ -0.52
TRAPPC11-202ENST00000357207 ZNF22P17026 224 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC11-202ENST00000357207 URB1-AS1Q96HZ7 61 aa11.78□□□□□ -0.52
TRAPPC11-202ENST00000357207 IGLV10-54A0A075B6I4 117 aa11.78□□□□□ -0.52
TRAPPC11-202ENST00000357207 A6NDX4 124 aa11.78□□□□□ -0.52
TRAPPC11-202ENST00000357207 NDUFV3P56181 108 aaKnown RBP11.78□□□□□ -0.52
TRAPPC11-202ENST00000357207 UBE2DNLQ8IWF7 75 aa11.78□□□□□ -0.52
TRAPPC11-202ENST00000357207 JMJD7-PLA2G4BH0Y9G9 81 aa11.77□□□□□ -0.52
TRAPPC11-202ENST00000357207 COX7A2LO14548 114 aa11.77□□□□□ -0.52
TRAPPC11-202ENST00000357207 CDK2AP2O75956 126 aa11.77□□□□□ -0.52
TRAPPC11-202ENST00000357207 P0DMU3 169 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms