RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 Q8N9W7 124 aa4.25□□□□□ -1.73
PTPRD-202ENST00000356435 TOMM6Q96B49 74 aa4.25□□□□□ -1.73
PTPRD-202ENST00000356435 MBD6Q96DN6 1003 aa4.25□□□□□ -1.73
PTPRD-202ENST00000356435 ANAPC1Q9H1A4 1944 aa4.25□□□□□ -1.73
PTPRD-202ENST00000356435 K7EN84 100 aa4.25□□□□□ -1.73
PTPRD-202ENST00000356435 REG3AQ06141 175 aa4.25□□□□□ -1.73
PTPRD-202ENST00000356435 Q6ZPA2 131 aa4.25□□□□□ -1.73
PTPRD-202ENST00000356435 WI2-2373I1.2A0A1W2PRP0 233 aa4.24□□□□□ -1.73
PTPRD-202ENST00000356435 WISP2O76076 250 aa4.24□□□□□ -1.73
PTPRD-202ENST00000356435 PRB2P02812 416 aaPredicted RBP4.24□□□□□ -1.73
PTPRD-202ENST00000356435 PCNX2A6NKB5 2137 aa4.24□□□□□ -1.73
PTPRD-202ENST00000356435 DEFB131BA0A096LNP1 70 aa4.24□□□□□ -1.73
PTPRD-202ENST00000356435 H3BMG7 143 aa4.24□□□□□ -1.73
PTPRD-202ENST00000356435 LGALS9O00182 355 aa4.24□□□□□ -1.73
PTPRD-202ENST00000356435 ATOX1O00244 68 aa4.24□□□□□ -1.73
PTPRD-202ENST00000356435 UBE2D4Q9Y2X8 147 aa4.24□□□□□ -1.73
PTPRD-202ENST00000356435 TRAV26-1A0A087WT03 109 aa4.24□□□□□ -1.73
PTPRD-202ENST00000356435 TRBV10-1A0A0K0K1A3 114 aa4.24□□□□□ -1.73
PTPRD-202ENST00000356435 H7C423 109 aa4.24□□□□□ -1.73
PTPRD-202ENST00000356435 USF3Q68DE3 2245 aa4.24□□□□□ -1.73
PTPRD-202ENST00000356435 TEX22C9J3V5 150 aa4.24□□□□□ -1.73
PTPRD-202ENST00000356435 HIGD2AQ9BW72 106 aa4.24□□□□□ -1.73
PTPRD-202ENST00000356435 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.24□□□□□ -1.73
PTPRD-202ENST00000356435 TRAV10A0A0B4J240 114 aa4.24□□□□□ -1.73
PTPRD-202ENST00000356435 C11orf86A6NJI1 115 aa4.24□□□□□ -1.73
PTPRD-202ENST00000356435 LECT2O14960 151 aa4.24□□□□□ -1.73
PTPRD-202ENST00000356435 ZNF747Q9BV97 191 aa4.24□□□□□ -1.73
PTPRD-202ENST00000356435 NUP210LQ5VU65 1888 aa4.24□□□□□ -1.73
PTPRD-202ENST00000356435 SPRNQ5BIV9 151 aa4.24□□□□□ -1.73
PTPRD-202ENST00000356435 TMEM256-PLSCR3K7ERE1 68 aa4.23□□□□□ -1.73
PTPRD-202ENST00000356435 HIGD1BQ9P298 99 aa4.23□□□□□ -1.73
PTPRD-202ENST00000356435 WNK2Q9Y3S1 2297 aa4.23□□□□□ -1.73
PTPRD-202ENST00000356435 HIVEP2P31629 2446 aa4.23□□□□□ -1.73
PTPRD-202ENST00000356435 SHANK1Q9Y566 2161 aa4.23□□□□□ -1.73
PTPRD-202ENST00000356435 TNFRSF13BO14836 293 aaPredicted RBP4.23□□□□□ -1.73
PTPRD-202ENST00000356435 A0A0J9YX75 114 aa4.23□□□□□ -1.73
PTPRD-202ENST00000356435 INAFM1C9JVW0 142 aa4.23□□□□□ -1.73
PTPRD-202ENST00000356435 DAND5Q8N907 189 aa4.23□□□□□ -1.73
PTPRD-202ENST00000356435 RITA1Q96K30 269 aa4.23□□□□□ -1.73
PTPRD-202ENST00000356435 ARFGEF3Q5TH69 2177 aa4.23□□□□□ -1.73
PTPRD-202ENST00000356435 GPR179Q6PRD1 2367 aa4.23□□□□□ -1.73
PTPRD-202ENST00000356435 LRRK1Q38SD2 2015 aa4.23□□□□□ -1.73
PTPRD-202ENST00000356435 IGHV1-58A0A0C4DH39 117 aa4.23□□□□□ -1.73
PTPRD-202ENST00000356435 USP17L23D6RBM5 183 aa4.23□□□□□ -1.73
PTPRD-202ENST00000356435 ASPHD1Q5U4P2 390 aa4.23□□□□□ -1.73
PTPRD-202ENST00000356435 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.23□□□□□ -1.73
PTPRD-202ENST00000356435 MUC6Q6W4X9 2439 aa4.23□□□□□ -1.73
PTPRD-202ENST00000356435 GATA1P15976 413 aaPredicted RBP4.23□□□□□ -1.73
PTPRD-202ENST00000356435 ZFAND2AQ8N6M9 145 aa4.23□□□□□ -1.73
PTPRD-202ENST00000356435 A0A1B0GXF2 115 aa4.23□□□□□ -1.73
PTPRD-202ENST00000356435 Q6YL49 198 aa4.23□□□□□ -1.73
PTPRD-202ENST00000356435 ODF3Q96PU9 254 aa4.23□□□□□ -1.73
PTPRD-202ENST00000356435 TRBV6-1A0A0K0K1D8 114 aa4.23□□□□□ -1.73
PTPRD-202ENST00000356435 FBXL19-AS1Q494R0 122 aa4.23□□□□□ -1.73
PTPRD-202ENST00000356435 KIAA2026Q5HYC2 2103 aa4.23□□□□□ -1.73
PTPRD-202ENST00000356435 LINC01548A6NM66 108 aa4.22□□□□□ -1.73
PTPRD-202ENST00000356435 IGLV2-14P01704 120 aa4.22□□□□□ -1.73
PTPRD-202ENST00000356435 IGHV4-31P0DP07 118 aa4.22□□□□□ -1.73
PTPRD-202ENST00000356435 UBE2D3P61077 147 aa4.22□□□□□ -1.73
PTPRD-202ENST00000356435 SPANXB1Q9NS25 103 aaPredicted RBP4.22□□□□□ -1.73
PTPRD-202ENST00000356435 ROS1P08922 2347 aa4.22□□□□□ -1.73
PTPRD-202ENST00000356435 MUC22E2RYF6 1773 aaPredicted RBP4.22□□□□□ -1.73
PTPRD-202ENST00000356435 EML5Q05BV3 1969 aa4.22□□□□□ -1.73
PTPRD-202ENST00000356435 MIFP14174 115 aa4.22□□□□□ -1.73
PTPRD-202ENST00000356435 Q8N7P7 452 aa4.22□□□□□ -1.73
PTPRD-202ENST00000356435 FAM110AQ9BQ89 295 aa4.22□□□□□ -1.73
PTPRD-202ENST00000356435 PRR15LQ9BU68 103 aa4.22□□□□□ -1.73
PTPRD-202ENST00000356435 A4D1N5 150 aa4.22□□□□□ -1.73
PTPRD-202ENST00000356435 G3V4G9 280 aa4.22□□□□□ -1.73
PTPRD-202ENST00000356435 SS18L2Q9UHA2 77 aa4.22□□□□□ -1.73
PTPRD-202ENST00000356435 RPL39P62891 51 aaKnown RBP4.22□□□□□ -1.73
PTPRD-202ENST00000356435 LINC00269Q8N2A0 174 aa4.22□□□□□ -1.73
PTPRD-202ENST00000356435 CHCHD10Q8WYQ3 142 aaPredicted RBP4.22□□□□□ -1.73
PTPRD-202ENST00000356435 IGKV3D-7A0A0C4DH55 119 aa4.22□□□□□ -1.73
PTPRD-202ENST00000356435 EIF4EBP1Q13541 118 aaPredicted RBP4.22□□□□□ -1.73
PTPRD-202ENST00000356435 FAM222AQ5U5X8 452 aa4.22□□□□□ -1.73
PTPRD-202ENST00000356435 LINC00322Q6ZN03 302 aaPredicted RBP4.22□□□□□ -1.73
PTPRD-202ENST00000356435 FAM19A5Q7Z5A7 132 aaPredicted RBP4.22□□□□□ -1.73
PTPRD-202ENST00000356435 MIR7-3HGQ8N6C7 128 aa4.22□□□□□ -1.73
PTPRD-202ENST00000356435 TCF20Q9UGU0 1960 aaKnown RBP4.22□□□□□ -1.73
PTPRD-202ENST00000356435 CLUHP3Q96NS8 147 aa4.21□□□□□ -1.73
PTPRD-202ENST00000356435 PLXND1Q9Y4D7 1925 aa4.21□□□□□ -1.73
PTPRD-202ENST00000356435 SDK2Q58EX2 2172 aa4.21□□□□□ -1.74
PTPRD-202ENST00000356435 ODF3BA8MYP8 253 aa4.21□□□□□ -1.74
PTPRD-202ENST00000356435 WFDC11Q8NEX6 87 aa4.21□□□□□ -1.74
PTPRD-202ENST00000356435 PTPRQQ9UMZ3 2332 aa4.21□□□□□ -1.74
PTPRD-202ENST00000356435 PCP2Q8IVA1 136 aa4.21□□□□□ -1.74
PTPRD-202ENST00000356435 LINC00474Q9P2X8 69 aa4.21□□□□□ -1.74
PTPRD-202ENST00000356435 PHF3Q92576 2039 aaKnown RBP4.21□□□□□ -1.74
PTPRD-202ENST00000356435 HCFC1P51610 2035 aa4.2□□□□□ -1.74
PTPRD-202ENST00000356435 PRAC2D3DTV9 90 aa4.2□□□□□ -1.74
PTPRD-202ENST00000356435 J3KT08 172 aa4.2□□□□□ -1.74
PTPRD-202ENST00000356435 P0DMU3 169 aa4.2□□□□□ -1.74
PTPRD-202ENST00000356435 FAM231AP0DMU4 169 aa4.2□□□□□ -1.74
PTPRD-202ENST00000356435 FAM231CP0DMU5 169 aa4.2□□□□□ -1.74
PTPRD-202ENST00000356435 CACNA1AO00555 2505 aa4.2□□□□□ -1.74
PTPRD-202ENST00000356435 BPY2O14599 106 aa4.2□□□□□ -1.74
PTPRD-202ENST00000356435 LY6G6CO95867 125 aa4.2□□□□□ -1.74
PTPRD-202ENST00000356435 C20orf203Q8NBC4 194 aa4.2□□□□□ -1.74
PTPRD-202ENST00000356435 PKDREJQ9NTG1 2253 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms