RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 ADAMTS20P59510 1910 aa13.43□□□□□ -0.26
COL27A1-201ENST00000356083 TRBV6-6A0A0A6YYG2 114 aa13.43□□□□□ -0.26
COL27A1-201ENST00000356083 K7EP34 96 aa13.43□□□□□ -0.26
COL27A1-201ENST00000356083 C9JQL5 133 aa13.42□□□□□ -0.26
COL27A1-201ENST00000356083 FAM19A1Q7Z5A9 133 aa13.42□□□□□ -0.26
COL27A1-201ENST00000356083 Q0VG73 95 aa13.42□□□□□ -0.26
COL27A1-201ENST00000356083 ZNF491Q8N8L2 437 aa13.42□□□□□ -0.26
COL27A1-201ENST00000356083 CLEC2BQ92478 149 aa13.42□□□□□ -0.26
COL27A1-201ENST00000356083 SCXQ7RTU7 201 aa13.41□□□□□ -0.26
COL27A1-201ENST00000356083 IGLC1P0CG04 106 aa13.41□□□□□ -0.26
COL27A1-201ENST00000356083 Q8N1Y9 231 aa13.41□□□□□ -0.26
COL27A1-201ENST00000356083 LRP4O75096 1905 aa13.41□□□□□ -0.26
COL27A1-201ENST00000356083 TMEM256-PLSCR3K7ERE1 68 aa13.41□□□□□ -0.26
COL27A1-201ENST00000356083 V9GYV3 84 aa13.41□□□□□ -0.26
COL27A1-201ENST00000356083 C7orf33Q8WU49 177 aa13.4□□□□□ -0.26
COL27A1-201ENST00000356083 DEFB1P60022 68 aa13.4□□□□□ -0.26
COL27A1-201ENST00000356083 MIR7-3HGQ8N6C7 128 aa13.4□□□□□ -0.26
COL27A1-201ENST00000356083 A0A0U1RQV1 116 aa13.4□□□□□ -0.26
COL27A1-201ENST00000356083 A4D1N5 150 aa13.4□□□□□ -0.26
COL27A1-201ENST00000356083 C14orf177Q52M58 125 aa13.4□□□□□ -0.26
COL27A1-201ENST00000356083 AGPAT4-IT1Q9H0P7 198 aa13.4□□□□□ -0.26
COL27A1-201ENST00000356083 FHL1Q13642 323 aa13.39□□□□□ -0.27
COL27A1-201ENST00000356083 LY6G6EA0A0G2JKS1 128 aa13.39□□□□□ -0.27
COL27A1-201ENST00000356083 C2orf70A6NJV1 201 aa13.39□□□□□ -0.27
COL27A1-201ENST00000356083 POU2AF1Q16633 256 aa13.39□□□□□ -0.27
COL27A1-201ENST00000356083 LINC00269Q8N2A0 174 aa13.38□□□□□ -0.27
COL27A1-201ENST00000356083 TMEM14CQ9P0S9 112 aa13.38□□□□□ -0.27
COL27A1-201ENST00000356083 H0YGX0 51 aa13.38□□□□□ -0.27
COL27A1-201ENST00000356083 CENPVL3A0A0U1RRI6 287 aa13.38□□□□□ -0.27
COL27A1-201ENST00000356083 BPY2O14599 106 aa13.38□□□□□ -0.27
COL27A1-201ENST00000356083 PRR4Q16378 134 aa13.38□□□□□ -0.27
COL27A1-201ENST00000356083 LINC01620Q4KN68 170 aa13.38□□□□□ -0.27
COL27A1-201ENST00000356083 FAM19A5Q7Z5A7 132 aaPredicted RBP13.38□□□□□ -0.27
COL27A1-201ENST00000356083 A0A0J9YXV3 536 aa13.37□□□□□ -0.27
COL27A1-201ENST00000356083 RITA1Q96K30 269 aa13.37□□□□□ -0.27
COL27A1-201ENST00000356083 PRR15LQ9BU68 103 aa13.37□□□□□ -0.27
COL27A1-201ENST00000356083 K7EM74 188 aa13.37□□□□□ -0.27
COL27A1-201ENST00000356083 LGALS9O00182 355 aa13.37□□□□□ -0.27
COL27A1-201ENST00000356083 PPDPFQ9H3Y8 114 aa13.37□□□□□ -0.27
COL27A1-201ENST00000356083 PTPRSQ13332 1948 aa13.37□□□□□ -0.27
COL27A1-201ENST00000356083 SPANXDQ9BXN6 97 aa13.37□□□□□ -0.27
COL27A1-201ENST00000356083 ATOX1O00244 68 aa13.36□□□□□ -0.27
COL27A1-201ENST00000356083 CRYGBP07316 175 aa13.36□□□□□ -0.27
COL27A1-201ENST00000356083 COX7BP24311 80 aa13.36□□□□□ -0.27
COL27A1-201ENST00000356083 SMIM20Q8N5G0 67 aa13.36□□□□□ -0.27
COL27A1-201ENST00000356083 TMEM263Q8WUH6 116 aaKnown RBP13.36□□□□□ -0.27
COL27A1-201ENST00000356083 SERP1Q9Y6X1 66 aa13.36□□□□□ -0.27
COL27A1-201ENST00000356083 C9orf85Q96MD7 179 aa13.36□□□□□ -0.27
COL27A1-201ENST00000356083 H3BQ85 93 aa13.35□□□□□ -0.27
COL27A1-201ENST00000356083 C11orf52Q96A22 123 aa13.35□□□□□ -0.27
COL27A1-201ENST00000356083 DEFB131BA0A096LNP1 70 aa13.35□□□□□ -0.27
COL27A1-201ENST00000356083 Q8TCH9 128 aa13.35□□□□□ -0.27
COL27A1-201ENST00000356083 QRFPP83859 136 aa13.35□□□□□ -0.27
COL27A1-201ENST00000356083 ZNF503-AS2A6NEH8 195 aa13.34□□□□□ -0.27
COL27A1-201ENST00000356083 H3BUA1 57 aa13.34□□□□□ -0.27
COL27A1-201ENST00000356083 KIR2DL5BA0A0G2JN68 375 aa13.34□□□□□ -0.27
COL27A1-201ENST00000356083 KIR2DL5BA0A0G2JPC4 375 aa13.34□□□□□ -0.27
COL27A1-201ENST00000356083 KIR2DL5AQ8N109 375 aa13.34□□□□□ -0.27
COL27A1-201ENST00000356083 UPK3BQ9BT76 320 aa13.34□□□□□ -0.27
COL27A1-201ENST00000356083 FN1P02751 2386 aaKnown RBP13.33□□□□□ -0.28
COL27A1-201ENST00000356083 IGLV9-49A0A0B4J1Y8 123 aa13.33□□□□□ -0.28
COL27A1-201ENST00000356083 Q6ZVH6 145 aa13.33□□□□□ -0.28
COL27A1-201ENST00000356083 HILS1P60008 231 aa13.33□□□□□ -0.28
COL27A1-201ENST00000356083 P0DMU3 169 aa13.32□□□□□ -0.28
COL27A1-201ENST00000356083 FAM231AP0DMU4 169 aa13.32□□□□□ -0.28
COL27A1-201ENST00000356083 FAM231CP0DMU5 169 aa13.32□□□□□ -0.28
COL27A1-201ENST00000356083 TLN2Q9Y4G6 2542 aa13.32□□□□□ -0.28
COL27A1-201ENST00000356083 INAFM1C9JVW0 142 aa13.32□□□□□ -0.28
COL27A1-201ENST00000356083 SPRNQ5BIV9 151 aa13.32□□□□□ -0.28
COL27A1-201ENST00000356083 IGF2-ASQ6U949 168 aa13.32□□□□□ -0.28
COL27A1-201ENST00000356083 RNF152Q8N8N0 203 aa13.32□□□□□ -0.28
COL27A1-201ENST00000356083 MDFICQ9P1T7 246 aa13.31□□□□□ -0.28
COL27A1-201ENST00000356083 COL5A1P20908 1838 aaPredicted RBP13.31□□□□□ -0.28
COL27A1-201ENST00000356083 LTBP1Q14766 1721 aa13.31□□□□□ -0.28
COL27A1-201ENST00000356083 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.3□□□□□ -0.28
COL27A1-201ENST00000356083 C15orf65H3BRN8 121 aa13.3□□□□□ -0.28
COL27A1-201ENST00000356083 C1orf158Q8N1D5 194 aa13.3□□□□□ -0.28
COL27A1-201ENST00000356083 MSRB1Q9NZV6 116 aa13.3□□□□□ -0.28
COL27A1-201ENST00000356083 C5orf56Q8N8D9 126 aa13.3□□□□□ -0.28
COL27A1-201ENST00000356083 JMJD7-PLA2G4BH0Y9G9 81 aa13.29□□□□□ -0.28
COL27A1-201ENST00000356083 K7EN84 100 aa13.29□□□□□ -0.28
COL27A1-201ENST00000356083 IGHV7-81A0A0B4J1V7 117 aa13.29□□□□□ -0.28
COL27A1-201ENST00000356083 IGHV2-70P01814 119 aa13.29□□□□□ -0.28
COL27A1-201ENST00000356083 C3orf84H3BNL1 204 aa13.29□□□□□ -0.28
COL27A1-201ENST00000356083 TAX1BP3O14907 124 aa13.29□□□□□ -0.28
COL27A1-201ENST00000356083 FAM236DA0A1B0GTK5 79 aa13.28□□□□□ -0.28
COL27A1-201ENST00000356083 FAM236CP0DP71 79 aa13.28□□□□□ -0.28
COL27A1-201ENST00000356083 CEMP1Q6PRD7 247 aaPredicted RBP13.28□□□□□ -0.28
COL27A1-201ENST00000356083 IGFL3Q6UXB1 125 aa13.28□□□□□ -0.28
COL27A1-201ENST00000356083 LINC00311Q8N616 119 aa13.28□□□□□ -0.28
COL27A1-201ENST00000356083 PRYO14603 147 aa13.28□□□□□ -0.28
COL27A1-201ENST00000356083 ZNF726P1Q15940 193 aa13.28□□□□□ -0.28
COL27A1-201ENST00000356083 DCANP1Q8TF63 244 aa13.28□□□□□ -0.28
COL27A1-201ENST00000356083 UBE2D2P62837 147 aa13.28□□□□□ -0.28
COL27A1-201ENST00000356083 C4orf3Q8WVX3 66 aa13.28□□□□□ -0.28
COL27A1-201ENST00000356083 TLN1Q9Y490 2541 aaKnown RBP13.28□□□□□ -0.28
COL27A1-201ENST00000356083 CTSZQ9UBR2 303 aa13.28□□□□□ -0.28
COL27A1-201ENST00000356083 PRO0255Q9UI72 69 aa13.28□□□□□ -0.28
COL27A1-201ENST00000356083 ADCYAP1P18509 176 aa13.27□□□□□ -0.28
COL27A1-201ENST00000356083 FAM215AQ9Y5M1 114 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 176 ms