RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 Q8N9W7 124 aa10.84□□□□□ -0.67
SREBF1-202ENST00000355815 C19orf71A6NCJ1 209 aa10.84□□□□□ -0.67
SREBF1-202ENST00000355815 IGHV4-38-2P0DP08 117 aa10.84□□□□□ -0.67
SREBF1-202ENST00000355815 CLEC2BQ92478 149 aa10.84□□□□□ -0.67
SREBF1-202ENST00000355815 OOSP1A8MZH6 123 aa10.83□□□□□ -0.68
SREBF1-202ENST00000355815 TCL1BO95988 128 aa10.83□□□□□ -0.68
SREBF1-202ENST00000355815 FAM110DQ8TAY7 271 aaPredicted RBP10.83□□□□□ -0.68
SREBF1-202ENST00000355815 RASL10AQ92737 203 aa10.83□□□□□ -0.68
SREBF1-202ENST00000355815 HIGD1BQ9P298 99 aa10.83□□□□□ -0.68
SREBF1-202ENST00000355815 TRGV11A0A075B6L2 103 aa10.82□□□□□ -0.68
SREBF1-202ENST00000355815 C11orf86A6NJI1 115 aa10.82□□□□□ -0.68
SREBF1-202ENST00000355815 C19orf84I3L1E1 186 aa10.82□□□□□ -0.68
SREBF1-202ENST00000355815 MRAPQ8TCY5 172 aa10.82□□□□□ -0.68
SREBF1-202ENST00000355815 OPRPNQ99935 248 aaPredicted RBP10.82□□□□□ -0.68
SREBF1-202ENST00000355815 ZNF80P51504 273 aaPredicted RBP10.81□□□□□ -0.68
SREBF1-202ENST00000355815 INAFM2P0DMQ5 153 aa10.81□□□□□ -0.68
SREBF1-202ENST00000355815 MALP21145 153 aa10.81□□□□□ -0.68
SREBF1-202ENST00000355815 IGHV1-69DA0A0B4J2H0 117 aa10.81□□□□□ -0.68
SREBF1-202ENST00000355815 CENPVL3A0A0U1RRI6 287 aa10.81□□□□□ -0.68
SREBF1-202ENST00000355815 TEX49A0A1B0GTD5 131 aa10.81□□□□□ -0.68
SREBF1-202ENST00000355815 E9PLD3 99 aa10.81□□□□□ -0.68
SREBF1-202ENST00000355815 TRBV12-3P01733 135 aa10.81□□□□□ -0.68
SREBF1-202ENST00000355815 IGHV1-69P01742 117 aa10.81□□□□□ -0.68
SREBF1-202ENST00000355815 BAALC-AS2P0C853 105 aa10.8□□□□□ -0.68
SREBF1-202ENST00000355815 CFHR3Q02985 330 aa10.8□□□□□ -0.68
SREBF1-202ENST00000355815 LAMA5O15230 3695 aa10.8□□□□□ -0.68
SREBF1-202ENST00000355815 TRBV7-1A0A0A6YYK4 115 aa10.8□□□□□ -0.68
SREBF1-202ENST00000355815 RNF223E7ERA6 249 aa10.8□□□□□ -0.68
SREBF1-202ENST00000355815 SOCS3O14543 225 aa10.8□□□□□ -0.68
SREBF1-202ENST00000355815 TMEM141Q96I45 108 aa10.8□□□□□ -0.68
SREBF1-202ENST00000355815 PIP4P2Q8N4L2 257 aa10.8□□□□□ -0.68
SREBF1-202ENST00000355815 STHQ8IWL8 128 aa10.79□□□□□ -0.68
SREBF1-202ENST00000355815 MLST8Q9BVC4 326 aa10.79□□□□□ -0.68
SREBF1-202ENST00000355815 PRSS22Q9GZN4 317 aa10.79□□□□□ -0.68
SREBF1-202ENST00000355815 NDUFV3P56181 108 aaKnown RBP10.79□□□□□ -0.68
SREBF1-202ENST00000355815 DEFB131AP59861 70 aa10.79□□□□□ -0.68
SREBF1-202ENST00000355815 RPL36AP83881 106 aaKnown RBP10.79□□□□□ -0.68
SREBF1-202ENST00000355815 RPL36ALQ969Q0 106 aaKnown RBP10.79□□□□□ -0.68
SREBF1-202ENST00000355815 LRBAP50851 2863 aa10.79□□□□□ -0.68
SREBF1-202ENST00000355815 IGHV4-30-2A0A087WSY4 118 aa10.79□□□□□ -0.68
SREBF1-202ENST00000355815 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.78□□□□□ -0.68
SREBF1-202ENST00000355815 IGKV2-29A2NJV5 120 aaPredicted RBP10.78□□□□□ -0.68
SREBF1-202ENST00000355815 PRB2P02812 416 aaPredicted RBP10.78□□□□□ -0.68
SREBF1-202ENST00000355815 CRIP1P50238 77 aa10.78□□□□□ -0.68
SREBF1-202ENST00000355815 A0A1B0GX51 115 aa10.78□□□□□ -0.68
SREBF1-202ENST00000355815 INS-IGF2F8WCM5 200 aa10.78□□□□□ -0.68
SREBF1-202ENST00000355815 I3L3M4 83 aa10.78□□□□□ -0.68
SREBF1-202ENST00000355815 BUB3O43684 328 aa10.78□□□□□ -0.68
SREBF1-202ENST00000355815 XGP55808 180 aa10.78□□□□□ -0.68
SREBF1-202ENST00000355815 XCL2Q9UBD3 114 aa10.78□□□□□ -0.68
SREBF1-202ENST00000355815 MSMBP08118 114 aa10.78□□□□□ -0.68
SREBF1-202ENST00000355815 HIST2H2BDQ6DRA6 164 aa10.78□□□□□ -0.68
SREBF1-202ENST00000355815 RPL32P62910 135 aaKnown RBP10.77□□□□□ -0.68
SREBF1-202ENST00000355815 UNQ9165/PRO28630Q6UXU0 137 aa10.77□□□□□ -0.68
SREBF1-202ENST00000355815 Q8N1Y9 231 aa10.77□□□□□ -0.68
SREBF1-202ENST00000355815 NPBQ8NG41 125 aa10.77□□□□□ -0.68
SREBF1-202ENST00000355815 A0A1W2PPR1 153 aa10.77□□□□□ -0.69
SREBF1-202ENST00000355815 CRYGBP07316 175 aa10.77□□□□□ -0.69
SREBF1-202ENST00000355815 BAALCQ8WXS3 180 aa10.77□□□□□ -0.69
SREBF1-202ENST00000355815 Q9H8V8 135 aa10.77□□□□□ -0.69
SREBF1-202ENST00000355815 B4DSR2 109 aa10.77□□□□□ -0.69
SREBF1-202ENST00000355815 TCTEX1D4Q5JR98 221 aa10.77□□□□□ -0.69
SREBF1-202ENST00000355815 IGHV4-59P01825 116 aa10.76□□□□□ -0.69
SREBF1-202ENST00000355815 IGF1P05019 195 aa10.76□□□□□ -0.69
SREBF1-202ENST00000355815 DSCR9P59020 149 aa10.76□□□□□ -0.69
SREBF1-202ENST00000355815 RBM3P98179 157 aaKnown RBP10.76□□□□□ -0.69
SREBF1-202ENST00000355815 ZNRF2Q8NHG8 242 aa10.76□□□□□ -0.69
SREBF1-202ENST00000355815 SPANXA1Q9NS26 97 aa10.76□□□□□ -0.69
SREBF1-202ENST00000355815 ANKRD17O75179 2603 aaKnown RBP10.76□□□□□ -0.69
SREBF1-202ENST00000355815 ZFHX4Q86UP3 3567 aa10.76□□□□□ -0.69
SREBF1-202ENST00000355815 NDUFA11Q86Y39 141 aa10.76□□□□□ -0.69
SREBF1-202ENST00000355815 DAZ1Q9NQZ3 744 aaKnown RBP10.76□□□□□ -0.69
SREBF1-202ENST00000355815 M0QXV9 152 aa10.75□□□□□ -0.69
SREBF1-202ENST00000355815 GAS8-AS1O95177 125 aa10.75□□□□□ -0.69
SREBF1-202ENST00000355815 PF4P02776 101 aa10.75□□□□□ -0.69
SREBF1-202ENST00000355815 RAI1Q7Z5J4 1906 aaPredicted RBP10.75□□□□□ -0.69
SREBF1-202ENST00000355815 INSP01308 110 aa10.75□□□□□ -0.69
SREBF1-202ENST00000355815 WI2-2373I1.2A0A1W2PRP0 233 aa10.75□□□□□ -0.69
SREBF1-202ENST00000355815 Q6ZQT7 251 aa10.75□□□□□ -0.69
SREBF1-202ENST00000355815 PTPRBP23467 1997 aa10.74□□□□□ -0.69
SREBF1-202ENST00000355815 IGHG4P01861 327 aa10.74□□□□□ -0.69
SREBF1-202ENST00000355815 URB1-AS1Q96HZ7 61 aa10.74□□□□□ -0.69
SREBF1-202ENST00000355815 ICOSQ9Y6W8 199 aa10.74□□□□□ -0.69
SREBF1-202ENST00000355815 CCDC179H3BU77 68 aa10.74□□□□□ -0.69
SREBF1-202ENST00000355815 DEFB136Q30KP8 78 aa10.74□□□□□ -0.69
SREBF1-202ENST00000355815 MYCNOSP40205 109 aa10.73□□□□□ -0.69
SREBF1-202ENST00000355815 LMO4P61968 165 aa10.73□□□□□ -0.69
SREBF1-202ENST00000355815 TRAV4A0A0B4J268 109 aa10.73□□□□□ -0.69
SREBF1-202ENST00000355815 TNFRSF13BO14836 293 aaPredicted RBP10.73□□□□□ -0.69
SREBF1-202ENST00000355815 ZNF415Q09FC8 603 aa10.73□□□□□ -0.69
SREBF1-202ENST00000355815 SIRPDQ9H106 197 aa10.73□□□□□ -0.69
SREBF1-202ENST00000355815 LY6LH3BQJ8 138 aa10.72□□□□□ -0.69
SREBF1-202ENST00000355815 RPL35AP18077 110 aaKnown RBP10.72□□□□□ -0.69
SREBF1-202ENST00000355815 GATA3P23771 443 aa10.72□□□□□ -0.69
SREBF1-202ENST00000355815 CEMP1Q6PRD7 247 aaPredicted RBP10.72□□□□□ -0.69
SREBF1-202ENST00000355815 TM2D2Q9BX73 214 aa10.72□□□□□ -0.69
SREBF1-202ENST00000355815 IGHV1OR15-1A0A075B7D0 117 aa10.72□□□□□ -0.69
SREBF1-202ENST00000355815 IGLV2-11P01706 119 aa10.72□□□□□ -0.69
SREBF1-202ENST00000355815 DEFB130BP0DP73 79 aa10.72□□□□□ -0.69
SREBF1-202ENST00000355815 DEFB130AP0DP74 79 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms