RNA–Protein interactions for RNA: ENST00000355637.8

RBFOX1-203, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-203ENST00000355637 Q9HAA7 133 aa6.69□□□□□ -1.34
RBFOX1-203ENST00000355637 HOXD3P31249 432 aaPredicted RBP6.69□□□□□ -1.34
RBFOX1-203ENST00000355637 LINC00846Q9NV44 126 aa6.69□□□□□ -1.34
RBFOX1-203ENST00000355637 PLGLAQ15195 96 aa6.68□□□□□ -1.34
RBFOX1-203ENST00000355637 KHDC1LQ5JSQ8 128 aa6.68□□□□□ -1.34
RBFOX1-203ENST00000355637 SMIM2Q9BVW6 85 aa6.68□□□□□ -1.34
RBFOX1-203ENST00000355637 LINC01600Q96MT4 127 aa6.68□□□□□ -1.34
RBFOX1-203ENST00000355637 RPL28P46779 137 aaKnown RBP6.68□□□□□ -1.34
RBFOX1-203ENST00000355637 FAM229BQ4G0N7 80 aa6.68□□□□□ -1.34
RBFOX1-203ENST00000355637 C6orf223Q8N319 242 aa6.68□□□□□ -1.34
RBFOX1-203ENST00000355637 DEFB123Q8N688 67 aa6.68□□□□□ -1.34
RBFOX1-203ENST00000355637 DAND5Q8N907 189 aa6.68□□□□□ -1.34
RBFOX1-203ENST00000355637 IGKV1D-37A0A075B6S9 117 aa6.67□□□□□ -1.34
RBFOX1-203ENST00000355637 FSTL3O95633 263 aa6.67□□□□□ -1.34
RBFOX1-203ENST00000355637 MGPP08493 103 aa6.67□□□□□ -1.34
RBFOX1-203ENST00000355637 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.67□□□□□ -1.34
RBFOX1-203ENST00000355637 IGHV3OR16-10A0A075B7F0 116 aa6.67□□□□□ -1.34
RBFOX1-203ENST00000355637 TRBV12-3P01733 135 aa6.67□□□□□ -1.34
RBFOX1-203ENST00000355637 IGKV1-16P04430 117 aa6.67□□□□□ -1.34
RBFOX1-203ENST00000355637 PAPPA-AS1Q5QFB9 102 aa6.67□□□□□ -1.34
RBFOX1-203ENST00000355637 IGFL4Q6B9Z1 124 aa6.67□□□□□ -1.34
RBFOX1-203ENST00000355637 TOMM6Q96B49 74 aa6.67□□□□□ -1.34
RBFOX1-203ENST00000355637 EPM2AB3EWF7 344 aa6.66□□□□□ -1.34
RBFOX1-203ENST00000355637 ZNF80P51504 273 aaPredicted RBP6.66□□□□□ -1.34
RBFOX1-203ENST00000355637 ENHOQ6UWT2 76 aa6.66□□□□□ -1.34
RBFOX1-203ENST00000355637 DEFB108BQ8NET1 73 aa6.66□□□□□ -1.34
RBFOX1-203ENST00000355637 UBE2D4Q9Y2X8 147 aa6.66□□□□□ -1.34
RBFOX1-203ENST00000355637 PLAC8L1A1L4L8 177 aa6.66□□□□□ -1.34
RBFOX1-203ENST00000355637 CD59P13987 128 aa6.66□□□□□ -1.34
RBFOX1-203ENST00000355637 Q6JHZ5 121 aa6.66□□□□□ -1.34
RBFOX1-203ENST00000355637 PRR15Q8IV56 129 aa6.66□□□□□ -1.34
RBFOX1-203ENST00000355637 ZNRF1Q8ND25 227 aa6.66□□□□□ -1.34
RBFOX1-203ENST00000355637 TIMM17AQ99595 171 aa6.66□□□□□ -1.34
RBFOX1-203ENST00000355637 ZNF71Q9NQZ8 489 aaPredicted RBP6.66□□□□□ -1.34
RBFOX1-203ENST00000355637 BUB3O43684 328 aa6.66□□□□□ -1.34
RBFOX1-203ENST00000355637 ZNF580Q9UK33 172 aa6.66□□□□□ -1.34
RBFOX1-203ENST00000355637 EP300Q09472 2414 aaPredicted RBP6.66□□□□□ -1.34
RBFOX1-203ENST00000355637 LINC01546A6NGU7 62 aa6.65□□□□□ -1.34
RBFOX1-203ENST00000355637 MRPS36P82909 103 aaKnown RBP6.65□□□□□ -1.34
RBFOX1-203ENST00000355637 C1orf229Q6ZS94 237 aaPredicted RBP6.65□□□□□ -1.34
RBFOX1-203ENST00000355637 C9orf106Q8NAJ2 232 aa6.65□□□□□ -1.34
RBFOX1-203ENST00000355637 RPL39LQ96EH5 51 aaKnown RBP6.65□□□□□ -1.34
RBFOX1-203ENST00000355637 M0R1B8 84 aa6.65□□□□□ -1.35
RBFOX1-203ENST00000355637 PSPHP1O15172 72 aa6.65□□□□□ -1.35
RBFOX1-203ENST00000355637 HOXB4P17483 251 aaPredicted RBP6.65□□□□□ -1.35
RBFOX1-203ENST00000355637 SUMO2P61956 95 aaKnown RBP6.65□□□□□ -1.35
RBFOX1-203ENST00000355637 Q6ZRU5 148 aa6.65□□□□□ -1.35
RBFOX1-203ENST00000355637 SAA1P0DJI8 122 aaPredicted RBP6.65□□□□□ -1.35
RBFOX1-203ENST00000355637 RPL39P62891 51 aaKnown RBP6.65□□□□□ -1.35
RBFOX1-203ENST00000355637 FDCSPQ8NFU4 85 aa6.65□□□□□ -1.35
RBFOX1-203ENST00000355637 TECTAO75443 2155 aa6.64□□□□□ -1.35
RBFOX1-203ENST00000355637 SAA2P0DJI9 122 aaPredicted RBP6.64□□□□□ -1.35
RBFOX1-203ENST00000355637 OXLD1Q5BKU9 147 aa6.64□□□□□ -1.35
RBFOX1-203ENST00000355637 PRO3102Q9H379 93 aa6.64□□□□□ -1.35
RBFOX1-203ENST00000355637 IGLV4-69A0A075B6H9 119 aa6.64□□□□□ -1.35
RBFOX1-203ENST00000355637 A0A0J9YXY3 114 aa6.64□□□□□ -1.35
RBFOX1-203ENST00000355637 M0R381 172 aa6.64□□□□□ -1.35
RBFOX1-203ENST00000355637 CFHR3Q02985 330 aa6.64□□□□□ -1.35
RBFOX1-203ENST00000355637 SPTSSBQ8NFR3 76 aa6.64□□□□□ -1.35
RBFOX1-203ENST00000355637 TRAV21A0A0B4J279 112 aa6.63□□□□□ -1.35
RBFOX1-203ENST00000355637 CNOT1A5YKK6 2376 aaKnown RBP6.63□□□□□ -1.35
RBFOX1-203ENST00000355637 DSPP15924 2871 aaKnown RBP6.63□□□□□ -1.35
RBFOX1-203ENST00000355637 APC2O95996 2303 aa6.63□□□□□ -1.35
RBFOX1-203ENST00000355637 WT1-ASQ06250 92 aa6.63□□□□□ -1.35
RBFOX1-203ENST00000355637 PKDREJQ9NTG1 2253 aa6.63□□□□□ -1.35
RBFOX1-203ENST00000355637 SPTBN1Q01082 2364 aaKnown RBP6.63□□□□□ -1.35
RBFOX1-203ENST00000355637 IGKV1D-17A0A075B6S4 117 aa6.63□□□□□ -1.35
RBFOX1-203ENST00000355637 IGHV1-18A0A0C4DH31 117 aa6.63□□□□□ -1.35
RBFOX1-203ENST00000355637 K7EMT4 169 aa6.63□□□□□ -1.35
RBFOX1-203ENST00000355637 TNRC18O15417 2968 aaPredicted RBP6.63□□□□□ -1.35
RBFOX1-203ENST00000355637 IGKV3-15P01624 115 aa6.63□□□□□ -1.35
RBFOX1-203ENST00000355637 DGAT2L7PQ6IED9 249 aa6.63□□□□□ -1.35
RBFOX1-203ENST00000355637 MSMPQ1L6U9 139 aa6.62□□□□□ -1.35
RBFOX1-203ENST00000355637 OPRPNQ99935 248 aaPredicted RBP6.62□□□□□ -1.35
RBFOX1-203ENST00000355637 ZNRD1Q9P1U0 126 aa6.62□□□□□ -1.35
RBFOX1-203ENST00000355637 DEFB109BQ30KR1 87 aa6.62□□□□□ -1.35
RBFOX1-203ENST00000355637 VSIG2Q96IQ7 327 aa6.62□□□□□ -1.35
RBFOX1-203ENST00000355637 AMELXQ99217 191 aa6.62□□□□□ -1.35
RBFOX1-203ENST00000355637 CACNA1GO43497 2377 aa6.61□□□□□ -1.35
RBFOX1-203ENST00000355637 WT1P19544 449 aaPredicted RBP6.61□□□□□ -1.35
RBFOX1-203ENST00000355637 S100A4P26447 101 aaKnown RBP6.61□□□□□ -1.35
RBFOX1-203ENST00000355637 CLEC19AQ6UXS0 136 aa6.61□□□□□ -1.35
RBFOX1-203ENST00000355637 LAMTOR3Q9UHA4 124 aa6.61□□□□□ -1.35
RBFOX1-203ENST00000355637 ROS1P08922 2347 aa6.61□□□□□ -1.35
RBFOX1-203ENST00000355637 FAM222AQ5U5X8 452 aa6.61□□□□□ -1.35
RBFOX1-203ENST00000355637 ZNF491Q8N8L2 437 aa6.61□□□□□ -1.35
RBFOX1-203ENST00000355637 GVINP1Q7Z2Y8 2422 aa6.61□□□□□ -1.35
RBFOX1-203ENST00000355637 SRRM5B3KS81 715 aa6.6□□□□□ -1.35
RBFOX1-203ENST00000355637 LEPROTO15243 131 aa6.6□□□□□ -1.35
RBFOX1-203ENST00000355637 LHBP01229 141 aa6.6□□□□□ -1.35
RBFOX1-203ENST00000355637 BLCAPP62952 87 aa6.6□□□□□ -1.35
RBFOX1-203ENST00000355637 IGFL3Q6UXB1 125 aa6.6□□□□□ -1.35
RBFOX1-203ENST00000355637 TMEM61Q8N0U2 210 aa6.6□□□□□ -1.35
RBFOX1-203ENST00000355637 C11orf44Q8N8P7 122 aa6.6□□□□□ -1.35
RBFOX1-203ENST00000355637 CACNA1BQ00975 2339 aa6.6□□□□□ -1.35
RBFOX1-203ENST00000355637 MED13LQ71F56 2210 aa6.6□□□□□ -1.35
RBFOX1-203ENST00000355637 COX7A2LO14548 114 aa6.6□□□□□ -1.35
RBFOX1-203ENST00000355637 PRB2P02812 416 aaPredicted RBP6.6□□□□□ -1.35
RBFOX1-203ENST00000355637 CCL13Q99616 98 aa6.6□□□□□ -1.35
RBFOX1-203ENST00000355637 LOC400499M0QZD8 3231 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms