RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 ZNRF2Q8NHG8 242 aa9.37□□□□□ -0.91
COLCA1-201ENST00000355430 RNF185Q96GF1 192 aa9.37□□□□□ -0.91
COLCA1-201ENST00000355430 A0A0J9YY99 117 aa9.36□□□□□ -0.91
COLCA1-201ENST00000355430 C11orf86A6NJI1 115 aa9.36□□□□□ -0.91
COLCA1-201ENST00000355430 MRPL23Q16540 153 aaKnown RBP9.36□□□□□ -0.91
COLCA1-201ENST00000355430 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.35□□□□□ -0.91
COLCA1-201ENST00000355430 IGKV2-29A2NJV5 120 aaPredicted RBP9.35□□□□□ -0.91
COLCA1-201ENST00000355430 GAGE2AQ6NT46 116 aa9.35□□□□□ -0.91
COLCA1-201ENST00000355430 Q6ZSV7 163 aa9.35□□□□□ -0.91
COLCA1-201ENST00000355430 ATRXP46100 2492 aa9.35□□□□□ -0.91
COLCA1-201ENST00000355430 A0A0J9YXV3 536 aa9.35□□□□□ -0.91
COLCA1-201ENST00000355430 A4D1N5 150 aa9.35□□□□□ -0.91
COLCA1-201ENST00000355430 F8W735 103 aaPredicted RBP9.35□□□□□ -0.91
COLCA1-201ENST00000355430 IGHG4P01861 327 aa9.35□□□□□ -0.91
COLCA1-201ENST00000355430 MUSTN1Q8IVN3 82 aa9.35□□□□□ -0.91
COLCA1-201ENST00000355430 CARD19Q96LW7 228 aa9.35□□□□□ -0.91
COLCA1-201ENST00000355430 JPT2Q9H910 190 aa9.35□□□□□ -0.91
COLCA1-201ENST00000355430 COL4A2P08572 1712 aa9.35□□□□□ -0.91
COLCA1-201ENST00000355430 DEFB135Q30KP9 77 aa9.34□□□□□ -0.91
COLCA1-201ENST00000355430 ADAMTS20P59510 1910 aa9.34□□□□□ -0.91
COLCA1-201ENST00000355430 A0A096LPF7 62 aa9.34□□□□□ -0.91
COLCA1-201ENST00000355430 SPATA25Q9BR10 227 aa9.34□□□□□ -0.91
COLCA1-201ENST00000355430 CSPG4Q6UVK1 2322 aa9.34□□□□□ -0.91
COLCA1-201ENST00000355430 DSCAMO60469 2012 aa9.34□□□□□ -0.91
COLCA1-201ENST00000355430 IGF1P05019 195 aa9.34□□□□□ -0.92
COLCA1-201ENST00000355430 MAPKAPK5-AS1Q8N8E1 139 aa9.34□□□□□ -0.92
COLCA1-201ENST00000355430 U3KQE9 123 aa9.34□□□□□ -0.92
COLCA1-201ENST00000355430 CRLF1O75462 422 aa9.33□□□□□ -0.92
COLCA1-201ENST00000355430 NAV2Q8IVL1 2488 aa9.33□□□□□ -0.92
COLCA1-201ENST00000355430 MED14OSP0DP75 135 aa9.33□□□□□ -0.92
COLCA1-201ENST00000355430 FOXI1Q12951 378 aa9.33□□□□□ -0.92
COLCA1-201ENST00000355430 IGKV2D-24A0A075B6R9 120 aa9.33□□□□□ -0.92
COLCA1-201ENST00000355430 Q8N1Y9 231 aa9.33□□□□□ -0.92
COLCA1-201ENST00000355430 NOTCH3Q9UM47 2321 aa9.32□□□□□ -0.92
COLCA1-201ENST00000355430 ANGP03950 147 aaKnown RBP9.32□□□□□ -0.92
COLCA1-201ENST00000355430 GAGE6Q13070 117 aa9.32□□□□□ -0.92
COLCA1-201ENST00000355430 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.32□□□□□ -0.92
COLCA1-201ENST00000355430 GAS8-AS1O95177 125 aa9.32□□□□□ -0.92
COLCA1-201ENST00000355430 IFITM1P13164 125 aa9.32□□□□□ -0.92
COLCA1-201ENST00000355430 C20orf173Q96LM9 149 aa9.32□□□□□ -0.92
COLCA1-201ENST00000355430 BBC3Q96PG8 261 aaPredicted RBP9.32□□□□□ -0.92
COLCA1-201ENST00000355430 OPRPNQ99935 248 aaPredicted RBP9.32□□□□□ -0.92
COLCA1-201ENST00000355430 ANKRD29Q8N6D5 301 aa9.31□□□□□ -0.92
COLCA1-201ENST00000355430 PTH2Q96A98 100 aa9.31□□□□□ -0.92
COLCA1-201ENST00000355430 ZFAND3Q9H8U3 227 aa9.31□□□□□ -0.92
COLCA1-201ENST00000355430 NAV3Q8IVL0 2385 aa9.31□□□□□ -0.92
COLCA1-201ENST00000355430 KRTAP10-9P60411 292 aa9.31□□□□□ -0.92
COLCA1-201ENST00000355430 TEN1Q86WV5 123 aa9.31□□□□□ -0.92
COLCA1-201ENST00000355430 TM2D2Q9BX73 214 aa9.31□□□□□ -0.92
COLCA1-201ENST00000355430 C15orf53Q8NAA6 179 aa9.3□□□□□ -0.92
COLCA1-201ENST00000355430 TIMM17AQ99595 171 aa9.3□□□□□ -0.92
COLCA1-201ENST00000355430 CDSNQ15517 529 aa9.3□□□□□ -0.92
COLCA1-201ENST00000355430 C1orf43Q9BWL3 253 aa9.3□□□□□ -0.92
COLCA1-201ENST00000355430 NEXN-AS1Q8NBZ9 246 aa9.3□□□□□ -0.92
COLCA1-201ENST00000355430 MDFICQ9P1T7 246 aa9.3□□□□□ -0.92
COLCA1-201ENST00000355430 C11orf45Q8TAV5 145 aa9.3□□□□□ -0.92
COLCA1-201ENST00000355430 HIST1H4AP62805 103 aaKnown RBP9.29□□□□□ -0.92
COLCA1-201ENST00000355430 HERVK_113P63121 156 aa9.29□□□□□ -0.92
COLCA1-201ENST00000355430 OVOL2Q9BRP0 275 aa9.29□□□□□ -0.92
COLCA1-201ENST00000355430 PFN2P35080 140 aa9.29□□□□□ -0.92
COLCA1-201ENST00000355430 TMEM61Q8N0U2 210 aa9.29□□□□□ -0.92
COLCA1-201ENST00000355430 Q9HAA7 133 aa9.29□□□□□ -0.92
COLCA1-201ENST00000355430 Q9H8V8 135 aa9.28□□□□□ -0.92
COLCA1-201ENST00000355430 SPANXB1Q9NS25 103 aaPredicted RBP9.28□□□□□ -0.92
COLCA1-201ENST00000355430 F8WEM9 126 aa9.28□□□□□ -0.92
COLCA1-201ENST00000355430 NKAPP1Q8N9T2 125 aa9.28□□□□□ -0.92
COLCA1-201ENST00000355430 LINC01006Q8NI28 216 aa9.28□□□□□ -0.92
COLCA1-201ENST00000355430 TET2Q6N021 2002 aaPredicted RBP9.28□□□□□ -0.92
COLCA1-201ENST00000355430 RAI1Q7Z5J4 1906 aaPredicted RBP9.28□□□□□ -0.92
COLCA1-201ENST00000355430 C11orf21Q9P2W6 132 aa9.28□□□□□ -0.92
COLCA1-201ENST00000355430 PRSS47A8MTI9 375 aa9.28□□□□□ -0.92
COLCA1-201ENST00000355430 EDA2RQ9HAV5 297 aa9.27□□□□□ -0.92
COLCA1-201ENST00000355430 GYPEP15421 78 aa9.27□□□□□ -0.93
COLCA1-201ENST00000355430 RNF183Q96D59 192 aa9.27□□□□□ -0.93
COLCA1-201ENST00000355430 SPANXA1Q9NS26 97 aa9.27□□□□□ -0.93
COLCA1-201ENST00000355430 TCL1BO95988 128 aa9.27□□□□□ -0.93
COLCA1-201ENST00000355430 SMR3AQ99954 134 aa9.27□□□□□ -0.93
COLCA1-201ENST00000355430 SONP18583 2426 aaKnown RBP9.27□□□□□ -0.93
COLCA1-201ENST00000355430 LGALS9O00182 355 aa9.27□□□□□ -0.93
COLCA1-201ENST00000355430 EBI3Q14213 229 aa9.27□□□□□ -0.93
COLCA1-201ENST00000355430 LINC01620Q4KN68 170 aa9.27□□□□□ -0.93
COLCA1-201ENST00000355430 DAND5Q8N907 189 aa9.27□□□□□ -0.93
COLCA1-201ENST00000355430 NDUFA7O95182 113 aa9.26□□□□□ -0.93
COLCA1-201ENST00000355430 MRPS12O15235 138 aaKnown RBP9.26□□□□□ -0.93
COLCA1-201ENST00000355430 CRYBA4P53673 196 aa9.26□□□□□ -0.93
COLCA1-201ENST00000355430 NRACQ8N912 160 aa9.26□□□□□ -0.93
COLCA1-201ENST00000355430 PSMG3-AS1Q96PY0 264 aa9.26□□□□□ -0.93
COLCA1-201ENST00000355430 CCDC168Q8NDH2 2452 aa9.26□□□□□ -0.93
COLCA1-201ENST00000355430 ATP6V0E2Q8NHE4 81 aa9.26□□□□□ -0.93
COLCA1-201ENST00000355430 SS18L2Q9UHA2 77 aa9.25□□□□□ -0.93
COLCA1-201ENST00000355430 INAFM2P0DMQ5 153 aa9.25□□□□□ -0.93
COLCA1-201ENST00000355430 PRR9Q5T870 116 aa9.25□□□□□ -0.93
COLCA1-201ENST00000355430 C9orf153Q5TBE3 101 aa9.25□□□□□ -0.93
COLCA1-201ENST00000355430 B5MCH6 92 aa9.24□□□□□ -0.93
COLCA1-201ENST00000355430 CDK2AP2O75956 126 aa9.24□□□□□ -0.93
COLCA1-201ENST00000355430 CEMP1Q6PRD7 247 aaPredicted RBP9.24□□□□□ -0.93
COLCA1-201ENST00000355430 Q8N6K4 173 aa9.24□□□□□ -0.93
COLCA1-201ENST00000355430 ZFAND2AQ8N6M9 145 aa9.24□□□□□ -0.93
COLCA1-201ENST00000355430 C20orf203Q8NBC4 194 aa9.24□□□□□ -0.93
COLCA1-201ENST00000355430 MAP6D1Q9H9H5 199 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 151.9 ms