RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 Q9UF83 564 aa10.32□□□□□ -0.76
EBF3-201ENST00000355311 TENM4Q6N022 2769 aa10.31□□□□□ -0.76
EBF3-201ENST00000355311 LGALS1P09382 135 aaKnown RBP10.31□□□□□ -0.76
EBF3-201ENST00000355311 P0DMU3 169 aa10.31□□□□□ -0.76
EBF3-201ENST00000355311 FAM231AP0DMU4 169 aa10.31□□□□□ -0.76
EBF3-201ENST00000355311 FAM231CP0DMU5 169 aa10.31□□□□□ -0.76
EBF3-201ENST00000355311 C2orf66Q6UXQ4 117 aa10.31□□□□□ -0.76
EBF3-201ENST00000355311 SMIM2Q9BVW6 85 aa10.31□□□□□ -0.76
EBF3-201ENST00000355311 CNFNQ9BYD5 112 aa10.31□□□□□ -0.76
EBF3-201ENST00000355311 ERG28Q9UKR5 140 aa10.31□□□□□ -0.76
EBF3-201ENST00000355311 RBAKDNA6NC62 111 aa10.31□□□□□ -0.76
EBF3-201ENST00000355311 PROK1P58294 105 aa10.31□□□□□ -0.76
EBF3-201ENST00000355311 DLX4Q92988 240 aaPredicted RBP10.31□□□□□ -0.76
EBF3-201ENST00000355311 BBC3Q96PG8 261 aaPredicted RBP10.31□□□□□ -0.76
EBF3-201ENST00000355311 TCL1BO95988 128 aa10.3□□□□□ -0.76
EBF3-201ENST00000355311 MYMXA0A1B0GTQ4 84 aa10.3□□□□□ -0.76
EBF3-201ENST00000355311 TMEM190Q8WZ59 177 aa10.3□□□□□ -0.76
EBF3-201ENST00000355311 A0A087WX48 190 aa10.29□□□□□ -0.76
EBF3-201ENST00000355311 ZNF815PA8K554 130 aa10.29□□□□□ -0.76
EBF3-201ENST00000355311 SOCS3O14543 225 aa10.29□□□□□ -0.76
EBF3-201ENST00000355311 ATP5LO75964 103 aa10.29□□□□□ -0.76
EBF3-201ENST00000355311 SLC25A16P16260 332 aa10.29□□□□□ -0.76
EBF3-201ENST00000355311 CRIP2P52943 208 aaPredicted RBP10.29□□□□□ -0.76
EBF3-201ENST00000355311 A0A1W2PRX2 142 aa10.29□□□□□ -0.76
EBF3-201ENST00000355311 ZNF56Q15929 161 aa10.29□□□□□ -0.76
EBF3-201ENST00000355311 C19orf54Q5BKX5 351 aa10.29□□□□□ -0.76
EBF3-201ENST00000355311 CRLF1O75462 422 aa10.29□□□□□ -0.76
EBF3-201ENST00000355311 SLURP1P55000 103 aa10.29□□□□□ -0.76
EBF3-201ENST00000355311 RAX2Q96IS3 184 aa10.29□□□□□ -0.76
EBF3-201ENST00000355311 PRADC1Q9BSG0 188 aa10.29□□□□□ -0.76
EBF3-201ENST00000355311 SMIM20Q8N5G0 67 aa10.28□□□□□ -0.76
EBF3-201ENST00000355311 DPH3P1Q9H4G8 78 aa10.28□□□□□ -0.76
EBF3-201ENST00000355311 IGHV4OR15-8A0A075B7B6 117 aa10.28□□□□□ -0.76
EBF3-201ENST00000355311 IGHV3OR16-12A0A075B7B8 117 aa10.28□□□□□ -0.76
EBF3-201ENST00000355311 A0A087WW49 117 aa10.28□□□□□ -0.76
EBF3-201ENST00000355311 B4DSR2 109 aa10.28□□□□□ -0.76
EBF3-201ENST00000355311 CCDC179H3BU77 68 aa10.28□□□□□ -0.76
EBF3-201ENST00000355311 HERV-K104P63124 156 aa10.28□□□□□ -0.76
EBF3-201ENST00000355311 ANKRD29Q8N6D5 301 aa10.28□□□□□ -0.76
EBF3-201ENST00000355311 TP53TG1Q9Y2A0 90 aa10.28□□□□□ -0.76
EBF3-201ENST00000355311 NHLRC4P0CG21 123 aaPredicted RBP10.27□□□□□ -0.76
EBF3-201ENST00000355311 SCGB1C2P0DMR2 95 aa10.27□□□□□ -0.76
EBF3-201ENST00000355311 CEMP1Q6PRD7 247 aaPredicted RBP10.27□□□□□ -0.76
EBF3-201ENST00000355311 TRPT1Q86TN4 253 aaKnown RBP10.27□□□□□ -0.77
EBF3-201ENST00000355311 Q8N1Y9 231 aa10.27□□□□□ -0.77
EBF3-201ENST00000355311 TRAV4A0A0B4J268 109 aa10.26□□□□□ -0.77
EBF3-201ENST00000355311 OVOL1O14753 267 aa10.26□□□□□ -0.77
EBF3-201ENST00000355311 TEX29Q8N6K0 151 aa10.26□□□□□ -0.77
EBF3-201ENST00000355311 TMEM170BQ5T4T1 132 aa10.26□□□□□ -0.77
EBF3-201ENST00000355311 SUMO4Q6EEV6 95 aa10.26□□□□□ -0.77
EBF3-201ENST00000355311 APRG1Q8IVJ8 170 aa10.26□□□□□ -0.77
EBF3-201ENST00000355311 DCANP1Q8TF63 244 aa10.26□□□□□ -0.77
EBF3-201ENST00000355311 ADARB2-AS1A8MUL3 147 aa10.25□□□□□ -0.77
EBF3-201ENST00000355311 F8VRH5 84 aa10.25□□□□□ -0.77
EBF3-201ENST00000355311 GAGE5Q13069 117 aa10.25□□□□□ -0.77
EBF3-201ENST00000355311 GAGE6Q13070 117 aa10.25□□□□□ -0.77
EBF3-201ENST00000355311 ZFAND6Q6FIF0 208 aa10.25□□□□□ -0.77
EBF3-201ENST00000355311 TEN1Q86WV5 123 aa10.25□□□□□ -0.77
EBF3-201ENST00000355311 BAALCQ8WXS3 180 aa10.25□□□□□ -0.77
EBF3-201ENST00000355311 USMG5Q96IX5 58 aa10.25□□□□□ -0.77
EBF3-201ENST00000355311 UBR5O95071 2799 aaPredicted RBP10.25□□□□□ -0.77
EBF3-201ENST00000355311 IGHV3-16A0A0C4DH30 117 aa10.25□□□□□ -0.77
EBF3-201ENST00000355311 ZNF580Q9UK33 172 aa10.25□□□□□ -0.77
EBF3-201ENST00000355311 PPDPFLQ8WWR9 84 aa10.24□□□□□ -0.77
EBF3-201ENST00000355311 SDHAF1A6NFY7 115 aa10.24□□□□□ -0.77
EBF3-201ENST00000355311 TAL2Q16559 108 aa10.24□□□□□ -0.77
EBF3-201ENST00000355311 H7C1H1 209 aa10.23□□□□□ -0.77
EBF3-201ENST00000355311 IGLV1-40P01703 118 aa10.23□□□□□ -0.77
EBF3-201ENST00000355311 VWFP04275 2813 aa10.23□□□□□ -0.77
EBF3-201ENST00000355311 IGHV3-38A0A0C4DH36 116 aa10.23□□□□□ -0.77
EBF3-201ENST00000355311 PLNP26678 52 aa10.23□□□□□ -0.77
EBF3-201ENST00000355311 HOXD3P31249 432 aaPredicted RBP10.23□□□□□ -0.77
EBF3-201ENST00000355311 DEFB131AP59861 70 aa10.23□□□□□ -0.77
EBF3-201ENST00000355311 ZNF876PQ49A33 203 aa10.23□□□□□ -0.77
EBF3-201ENST00000355311 C9JAW5 83 aa10.23□□□□□ -0.77
EBF3-201ENST00000355311 C11orf86A6NJI1 115 aa10.22□□□□□ -0.77
EBF3-201ENST00000355311 PSMB8P28062 276 aa10.22□□□□□ -0.77
EBF3-201ENST00000355311 A8MWV9 139 aa10.22□□□□□ -0.77
EBF3-201ENST00000355311 TSHBP01222 138 aa10.22□□□□□ -0.77
EBF3-201ENST00000355311 ELANEP08246 267 aa10.21□□□□□ -0.77
EBF3-201ENST00000355311 NDUFA11Q86Y39 141 aa10.21□□□□□ -0.77
EBF3-201ENST00000355311 RBMY1A1P0DJD3 496 aaKnown RBP10.21□□□□□ -0.78
EBF3-201ENST00000355311 RBMY1CP0DJD4 496 aa10.21□□□□□ -0.78
EBF3-201ENST00000355311 NPC2P61916 151 aa10.21□□□□□ -0.78
EBF3-201ENST00000355311 SRSF2Q01130 221 aaKnown RBP10.21□□□□□ -0.78
EBF3-201ENST00000355311 RBMY1FQ15415 496 aaKnown RBP10.21□□□□□ -0.78
EBF3-201ENST00000355311 TRBV7-9A0A0J9YWB2 115 aa10.2□□□□□ -0.78
EBF3-201ENST00000355311 CRYGDP07320 174 aa10.2□□□□□ -0.78
EBF3-201ENST00000355311 CFC1BP0CG36 223 aa10.2□□□□□ -0.78
EBF3-201ENST00000355311 CFC1P0CG37 223 aa10.2□□□□□ -0.78
EBF3-201ENST00000355311 ID1P41134 155 aa10.2□□□□□ -0.78
EBF3-201ENST00000355311 UBE2D1P51668 147 aa10.2□□□□□ -0.78
EBF3-201ENST00000355311 LINC00315P59091 139 aa10.2□□□□□ -0.78
EBF3-201ENST00000355311 CFAP161Q6P656 301 aa10.2□□□□□ -0.78
EBF3-201ENST00000355311 UBE2D3P61077 147 aa10.2□□□□□ -0.78
EBF3-201ENST00000355311 UBE2D2P62837 147 aa10.2□□□□□ -0.78
EBF3-201ENST00000355311 MRPL53Q96EL3 112 aaKnown RBP10.2□□□□□ -0.78
EBF3-201ENST00000355311 LINC01546A6NGU7 62 aa10.2□□□□□ -0.78
EBF3-201ENST00000355311 A8MZ25 164 aa10.2□□□□□ -0.78
EBF3-201ENST00000355311 TSPEAR-AS2P59090 65 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms