RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 SORL1Q92673 2214 aa12.36□□□□□ -0.43
VPS13B-201ENST00000355155 IGLC3P0DOY3 106 aa12.36□□□□□ -0.43
VPS13B-201ENST00000355155 RPL35AP18077 110 aaKnown RBP12.36□□□□□ -0.43
VPS13B-201ENST00000355155 ODF1Q14990 250 aa12.36□□□□□ -0.43
VPS13B-201ENST00000355155 NPSP0C0P6 89 aa12.36□□□□□ -0.43
VPS13B-201ENST00000355155 KIR2DL4Q99706 377 aa12.36□□□□□ -0.43
VPS13B-201ENST00000355155 I3L3M4 83 aa12.35□□□□□ -0.43
VPS13B-201ENST00000355155 IGLL1P15814 213 aa12.35□□□□□ -0.43
VPS13B-201ENST00000355155 MRPL16Q9NX20 251 aaKnown RBP12.35□□□□□ -0.43
VPS13B-201ENST00000355155 TSHBP01222 138 aa12.34□□□□□ -0.43
VPS13B-201ENST00000355155 HTN1P15515 57 aa12.34□□□□□ -0.43
VPS13B-201ENST00000355155 ERASQ7Z444 233 aa12.34□□□□□ -0.43
VPS13B-201ENST00000355155 TIMM17AQ99595 171 aa12.34□□□□□ -0.43
VPS13B-201ENST00000355155 C2orf66Q6UXQ4 117 aa12.34□□□□□ -0.43
VPS13B-201ENST00000355155 TRBV10-1A0A0K0K1A3 114 aa12.33□□□□□ -0.43
VPS13B-201ENST00000355155 IGIPA6NJ69 53 aa12.33□□□□□ -0.43
VPS13B-201ENST00000355155 PRIMA1Q86XR5 153 aa12.33□□□□□ -0.43
VPS13B-201ENST00000355155 TMEM141Q96I45 108 aa12.33□□□□□ -0.43
VPS13B-201ENST00000355155 EGFEM1PQ0D2K5 195 aa12.33□□□□□ -0.44
VPS13B-201ENST00000355155 RRN3P1Q2M238 152 aa12.33□□□□□ -0.44
VPS13B-201ENST00000355155 UQCR10Q9UDW1 63 aa12.33□□□□□ -0.44
VPS13B-201ENST00000355155 CYSLTR1Q9Y271 337 aa12.33□□□□□ -0.44
VPS13B-201ENST00000355155 A0A087WX48 190 aa12.33□□□□□ -0.44
VPS13B-201ENST00000355155 A8MZ25 164 aa12.33□□□□□ -0.44
VPS13B-201ENST00000355155 Q6ZSN1 163 aa12.33□□□□□ -0.44
VPS13B-201ENST00000355155 NEXN-AS1Q8NBZ9 246 aa12.33□□□□□ -0.44
VPS13B-201ENST00000355155 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.32□□□□□ -0.44
VPS13B-201ENST00000355155 C14orf144Q96I85 54 aa12.32□□□□□ -0.44
VPS13B-201ENST00000355155 X6R8D5 127 aa12.32□□□□□ -0.44
VPS13B-201ENST00000355155 ATOH7Q8N100 152 aa12.31□□□□□ -0.44
VPS13B-201ENST00000355155 APOC4P55056 127 aa12.31□□□□□ -0.44
VPS13B-201ENST00000355155 MAJINQ3KP22 176 aa12.31□□□□□ -0.44
VPS13B-201ENST00000355155 P0DMU3 169 aa12.3□□□□□ -0.44
VPS13B-201ENST00000355155 FAM231AP0DMU4 169 aa12.3□□□□□ -0.44
VPS13B-201ENST00000355155 FAM231CP0DMU5 169 aa12.3□□□□□ -0.44
VPS13B-201ENST00000355155 SCGB3A1Q96QR1 104 aa12.3□□□□□ -0.44
VPS13B-201ENST00000355155 OR4C5Q8NGB2 326 aa12.3□□□□□ -0.44
VPS13B-201ENST00000355155 PYGO1Q9Y3Y4 419 aa12.3□□□□□ -0.44
VPS13B-201ENST00000355155 NOTCH2Q04721 2471 aa12.29□□□□□ -0.44
VPS13B-201ENST00000355155 CRYBA4P53673 196 aa12.29□□□□□ -0.44
VPS13B-201ENST00000355155 Q6ZTI0 123 aa12.29□□□□□ -0.44
VPS13B-201ENST00000355155 BAHCC1Q9P281 2608 aa12.29□□□□□ -0.44
VPS13B-201ENST00000355155 IGHV3OR16-12A0A075B7B8 117 aa12.29□□□□□ -0.44
VPS13B-201ENST00000355155 TRGV1A0A0A0MS02 117 aa12.29□□□□□ -0.44
VPS13B-201ENST00000355155 HSBP1L1C9JCN9 74 aa12.29□□□□□ -0.44
VPS13B-201ENST00000355155 C20orf203Q8NBC4 194 aa12.29□□□□□ -0.44
VPS13B-201ENST00000355155 DEFA6Q01524 100 aa12.29□□□□□ -0.44
VPS13B-201ENST00000355155 BAALCQ8WXS3 180 aa12.29□□□□□ -0.44
VPS13B-201ENST00000355155 HHLA3Q9XRX5 114 aa12.29□□□□□ -0.44
VPS13B-201ENST00000355155 PMCHL2Q9BQD1 86 aa12.28□□□□□ -0.44
VPS13B-201ENST00000355155 DKK2Q9UBU2 259 aa12.28□□□□□ -0.44
VPS13B-201ENST00000355155 ZMAT5Q9UDW3 170 aaKnown RBP12.28□□□□□ -0.44
VPS13B-201ENST00000355155 TNFRSF18Q9Y5U5 241 aa12.28□□□□□ -0.44
VPS13B-201ENST00000355155 WNK1Q9H4A3 2382 aa12.28□□□□□ -0.44
VPS13B-201ENST00000355155 hDV102S1A0JD36 115 aa12.28□□□□□ -0.44
VPS13B-201ENST00000355155 DLEU1O43261 78 aa12.28□□□□□ -0.44
VPS13B-201ENST00000355155 NEGR1Q7Z3B1 354 aa12.28□□□□□ -0.44
VPS13B-201ENST00000355155 NOP10Q9NPE3 64 aaKnown RBP12.28□□□□□ -0.44
VPS13B-201ENST00000355155 CMYA5Q8N3K9 4069 aa12.27□□□□□ -0.44
VPS13B-201ENST00000355155 DPM2O94777 84 aa12.27□□□□□ -0.44
VPS13B-201ENST00000355155 CTAG1AP78358 180 aa12.27□□□□□ -0.44
VPS13B-201ENST00000355155 TP53TG1Q9Y2A0 90 aa12.27□□□□□ -0.44
VPS13B-201ENST00000355155 MRPS16Q9Y3D3 137 aaKnown RBP12.27□□□□□ -0.44
VPS13B-201ENST00000355155 TRBV6-4A0A1B0GX49 114 aa12.27□□□□□ -0.45
VPS13B-201ENST00000355155 F8VRH5 84 aa12.27□□□□□ -0.45
VPS13B-201ENST00000355155 PRSS1P07477 247 aa12.27□□□□□ -0.45
VPS13B-201ENST00000355155 PLNP26678 52 aa12.27□□□□□ -0.45
VPS13B-201ENST00000355155 LBHQ53QV2 105 aaPredicted RBP12.27□□□□□ -0.45
VPS13B-201ENST00000355155 Q6ZN92 141 aa12.27□□□□□ -0.45
VPS13B-201ENST00000355155 F8P00451 2351 aa12.26□□□□□ -0.45
VPS13B-201ENST00000355155 K7EQD1 137 aa12.26□□□□□ -0.45
VPS13B-201ENST00000355155 IGKCP01834 107 aa12.26□□□□□ -0.45
VPS13B-201ENST00000355155 ZNF479Q96JC4 524 aa12.26□□□□□ -0.45
VPS13B-201ENST00000355155 LINC00694P0DN24 101 aa12.26□□□□□ -0.45
VPS13B-201ENST00000355155 COX8AP10176 69 aa12.26□□□□□ -0.45
VPS13B-201ENST00000355155 DNAH3Q8TD57 4116 aa12.25□□□□□ -0.45
VPS13B-201ENST00000355155 CHCHD7Q9BUK0 85 aa12.25□□□□□ -0.45
VPS13B-201ENST00000355155 IGHV3-73A0A0B4J1V6 119 aa12.24□□□□□ -0.45
VPS13B-201ENST00000355155 LYRM9A8MSI8 78 aa12.24□□□□□ -0.45
VPS13B-201ENST00000355155 C12orf54Q6X4T0 127 aa12.24□□□□□ -0.45
VPS13B-201ENST00000355155 C3orf56Q8N813 242 aa12.24□□□□□ -0.45
VPS13B-201ENST00000355155 TRBV7-3A0A075B6L6 115 aa12.24□□□□□ -0.45
VPS13B-201ENST00000355155 H0Y8G0 127 aa12.24□□□□□ -0.45
VPS13B-201ENST00000355155 FGF6P10767 208 aa12.24□□□□□ -0.45
VPS13B-201ENST00000355155 TIMM21Q9BVV7 248 aa12.24□□□□□ -0.45
VPS13B-201ENST00000355155 UBE2D3P61077 147 aa12.23□□□□□ -0.45
VPS13B-201ENST00000355155 UBE2D2P62837 147 aa12.23□□□□□ -0.45
VPS13B-201ENST00000355155 DAZ4Q86SG3 579 aaKnown RBP12.23□□□□□ -0.45
VPS13B-201ENST00000355155 DAZ3Q9NR90 486 aaKnown RBP12.23□□□□□ -0.45
VPS13B-201ENST00000355155 MRPL35Q9NZE8 188 aaKnown RBP12.23□□□□□ -0.45
VPS13B-201ENST00000355155 PMVKQ15126 192 aa12.23□□□□□ -0.45
VPS13B-201ENST00000355155 ANKRD39Q53RE8 183 aa12.23□□□□□ -0.45
VPS13B-201ENST00000355155 GTSF1LQ9H1H1 148 aa12.23□□□□□ -0.45
VPS13B-201ENST00000355155 PAPPA-AS1Q5QFB9 102 aa12.22□□□□□ -0.45
VPS13B-201ENST00000355155 CHTOPQ9Y3Y2 248 aaKnown RBP12.22□□□□□ -0.45
VPS13B-201ENST00000355155 PRSS29PA6NIE9 313 aa12.22□□□□□ -0.45
VPS13B-201ENST00000355155 FHL2Q14192 279 aa12.22□□□□□ -0.45
VPS13B-201ENST00000355155 RNF183Q96D59 192 aa12.22□□□□□ -0.45
VPS13B-201ENST00000355155 Q9UF83 564 aa12.22□□□□□ -0.45
VPS13B-201ENST00000355155 BOD1L2Q8IYS8 172 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms