RNA–Protein interactions for RNA: ENST00000355059.8

NEIL1-201, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEIL1, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-201ENST00000355059 RAX2Q96IS3 184 aa8.48□□□□□ -1.05
NEIL1-201ENST00000355059 PPP1R17O96001 155 aa8.48□□□□□ -1.05
NEIL1-201ENST00000355059 RPL35AP18077 110 aaKnown RBP8.48□□□□□ -1.05
NEIL1-201ENST00000355059 FOXI2Q6ZQN5 318 aa8.48□□□□□ -1.05
NEIL1-201ENST00000355059 RPL39LQ96EH5 51 aaKnown RBP8.48□□□□□ -1.05
NEIL1-201ENST00000355059 LINC01619G3V211 115 aa8.47□□□□□ -1.05
NEIL1-201ENST00000355059 GNRH2O43555 120 aa8.47□□□□□ -1.05
NEIL1-201ENST00000355059 ELANEP08246 267 aa8.47□□□□□ -1.05
NEIL1-201ENST00000355059 DEFB131AP59861 70 aa8.47□□□□□ -1.05
NEIL1-201ENST00000355059 SMAD5-AS1Q9Y6J3 95 aa8.47□□□□□ -1.05
NEIL1-201ENST00000355059 IGKV2D-26A0A0A0MRZ7 120 aa8.47□□□□□ -1.05
NEIL1-201ENST00000355059 IGKV3D-20A0A0C4DH25 116 aa8.47□□□□□ -1.05
NEIL1-201ENST00000355059 F8VRH5 84 aa8.47□□□□□ -1.05
NEIL1-201ENST00000355059 IGLC6P0CF74 106 aa8.47□□□□□ -1.05
NEIL1-201ENST00000355059 Q6ZUT4 128 aa8.47□□□□□ -1.05
NEIL1-201ENST00000355059 CEND1Q8N111 149 aa8.47□□□□□ -1.05
NEIL1-201ENST00000355059 PIFOQ8TCI5 191 aa8.47□□□□□ -1.05
NEIL1-201ENST00000355059 GAGE12JA6NER3 117 aa8.46□□□□□ -1.05
NEIL1-201ENST00000355059 CCL24O00175 119 aa8.46□□□□□ -1.05
NEIL1-201ENST00000355059 GAGE7O76087 117 aa8.46□□□□□ -1.05
NEIL1-201ENST00000355059 GAGE12FP0CL80 117 aa8.46□□□□□ -1.05
NEIL1-201ENST00000355059 GAGE12GP0CL81 117 aa8.46□□□□□ -1.05
NEIL1-201ENST00000355059 GAGE12IP0CL82 117 aa8.46□□□□□ -1.05
NEIL1-201ENST00000355059 GAGE4Q13068 117 aa8.46□□□□□ -1.05
NEIL1-201ENST00000355059 EBI3Q14213 229 aa8.46□□□□□ -1.05
NEIL1-201ENST00000355059 Q8N6K4 173 aa8.46□□□□□ -1.06
NEIL1-201ENST00000355059 UBE2E2Q96LR5 201 aa8.46□□□□□ -1.06
NEIL1-201ENST00000355059 CCDC140Q96MF4 163 aa8.46□□□□□ -1.06
NEIL1-201ENST00000355059 PRADC1Q9BSG0 188 aa8.46□□□□□ -1.06
NEIL1-201ENST00000355059 TP53TG1Q9Y2A0 90 aa8.46□□□□□ -1.06
NEIL1-201ENST00000355059 IGHV3-73A0A0B4J1V6 119 aa8.45□□□□□ -1.06
NEIL1-201ENST00000355059 SMIM9A6NGZ8 99 aa8.45□□□□□ -1.06
NEIL1-201ENST00000355059 IGF1P05019 195 aa8.45□□□□□ -1.06
NEIL1-201ENST00000355059 TRAV2A0A0B4J234 112 aa8.44□□□□□ -1.06
NEIL1-201ENST00000355059 MRPS12O15235 138 aaKnown RBP8.44□□□□□ -1.06
NEIL1-201ENST00000355059 TRAV12-2A0A075B6T6 113 aa8.44□□□□□ -1.06
NEIL1-201ENST00000355059 LINC01549A6NIU2 74 aa8.44□□□□□ -1.06
NEIL1-201ENST00000355059 LGALS1P09382 135 aaKnown RBP8.44□□□□□ -1.06
NEIL1-201ENST00000355059 C12orf74Q32Q52 190 aa8.44□□□□□ -1.06
NEIL1-201ENST00000355059 SPENQ96T58 3664 aaKnown RBP8.44□□□□□ -1.06
NEIL1-201ENST00000355059 A0A096LNJ9 63 aa8.44□□□□□ -1.06
NEIL1-201ENST00000355059 MYMXA0A1B0GTQ4 84 aa8.44□□□□□ -1.06
NEIL1-201ENST00000355059 Q6ZQT7 251 aa8.44□□□□□ -1.06
NEIL1-201ENST00000355059 RNF185Q96GF1 192 aa8.44□□□□□ -1.06
NEIL1-201ENST00000355059 AGRNO00468 2067 aa8.44□□□□□ -1.06
NEIL1-201ENST00000355059 RBAKDNA6NC62 111 aa8.43□□□□□ -1.06
NEIL1-201ENST00000355059 NDUFA4O00483 81 aa8.43□□□□□ -1.06
NEIL1-201ENST00000355059 HLA-DRB4P13762 266 aa8.43□□□□□ -1.06
NEIL1-201ENST00000355059 HLA-DRB4X5D2U9 266 aa8.43□□□□□ -1.06
NEIL1-201ENST00000355059 KNCNA6PVL3 124 aa8.43□□□□□ -1.06
NEIL1-201ENST00000355059 STHQ8IWL8 128 aa8.43□□□□□ -1.06
NEIL1-201ENST00000355059 ZNF702PQ9H963 129 aa8.43□□□□□ -1.06
NEIL1-201ENST00000355059 EDN2P20800 178 aa8.43□□□□□ -1.06
NEIL1-201ENST00000355059 LINC01006Q8NI28 216 aa8.43□□□□□ -1.06
NEIL1-201ENST00000355059 ESM1Q9NQ30 184 aa8.43□□□□□ -1.06
NEIL1-201ENST00000355059 PAPPA-AS1Q5QFB9 102 aa8.42□□□□□ -1.06
NEIL1-201ENST00000355059 ZFAND6Q6FIF0 208 aa8.42□□□□□ -1.06
NEIL1-201ENST00000355059 C11orf21Q9P2W6 132 aa8.42□□□□□ -1.06
NEIL1-201ENST00000355059 KLK9Q9UKQ9 250 aa8.42□□□□□ -1.06
NEIL1-201ENST00000355059 CLPSL1A2RUU4 121 aa8.42□□□□□ -1.06
NEIL1-201ENST00000355059 VCYO14598 125 aa8.42□□□□□ -1.06
NEIL1-201ENST00000355059 SPINK13Q1W4C9 94 aa8.42□□□□□ -1.06
NEIL1-201ENST00000355059 ZNF876PQ49A33 203 aa8.42□□□□□ -1.06
NEIL1-201ENST00000355059 DEFB121Q5J5C9 76 aa8.42□□□□□ -1.06
NEIL1-201ENST00000355059 MEIG1Q5JSS6 88 aa8.42□□□□□ -1.06
NEIL1-201ENST00000355059 DLX4Q92988 240 aaPredicted RBP8.42□□□□□ -1.06
NEIL1-201ENST00000355059 U3KQK5 164 aa8.42□□□□□ -1.06
NEIL1-201ENST00000355059 HIVEP1P15822 2718 aa8.41□□□□□ -1.06
NEIL1-201ENST00000355059 IGHV7-4-1A0A0J9YVY3 117 aa8.41□□□□□ -1.06
NEIL1-201ENST00000355059 SDHAF1A6NFY7 115 aa8.41□□□□□ -1.06
NEIL1-201ENST00000355059 F8W735 103 aaPredicted RBP8.41□□□□□ -1.06
NEIL1-201ENST00000355059 FGF6P10767 208 aa8.41□□□□□ -1.06
NEIL1-201ENST00000355059 APRG1Q8IVJ8 170 aa8.41□□□□□ -1.06
NEIL1-201ENST00000355059 ZFAND3Q9H8U3 227 aa8.41□□□□□ -1.06
NEIL1-201ENST00000355059 XCL2Q9UBD3 114 aa8.41□□□□□ -1.06
NEIL1-201ENST00000355059 IGLL5B9A064 214 aa8.41□□□□□ -1.06
NEIL1-201ENST00000355059 LINC01587Q99440 93 aa8.41□□□□□ -1.06
NEIL1-201ENST00000355059 DUSP14O95147 198 aaKnown RBP8.41□□□□□ -1.06
NEIL1-201ENST00000355059 IGHG4P01861 327 aa8.41□□□□□ -1.06
NEIL1-201ENST00000355059 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.4□□□□□ -1.06
NEIL1-201ENST00000355059 NF1P21359 2839 aa8.4□□□□□ -1.06
NEIL1-201ENST00000355059 LINC00694P0DN24 101 aa8.4□□□□□ -1.06
NEIL1-201ENST00000355059 NPC2P61916 151 aa8.4□□□□□ -1.06
NEIL1-201ENST00000355059 MAPKAPK5-AS1Q8N8E1 139 aa8.4□□□□□ -1.06
NEIL1-201ENST00000355059 TENM4Q6N022 2769 aa8.4□□□□□ -1.07
NEIL1-201ENST00000355059 C9orf47Q6ZRZ4 202 aa8.39□□□□□ -1.07
NEIL1-201ENST00000355059 JPT2Q9H910 190 aa8.39□□□□□ -1.07
NEIL1-201ENST00000355059 F5H768 121 aa8.39□□□□□ -1.07
NEIL1-201ENST00000355059 HTN3P15516 51 aa8.39□□□□□ -1.07
NEIL1-201ENST00000355059 MRPL53Q96EL3 112 aaKnown RBP8.39□□□□□ -1.07
NEIL1-201ENST00000355059 NOTCH1P46531 2555 aa8.38□□□□□ -1.07
NEIL1-201ENST00000355059 A0A0U1RRA0 63 aa8.38□□□□□ -1.07
NEIL1-201ENST00000355059 HILS1P60008 231 aa8.38□□□□□ -1.07
NEIL1-201ENST00000355059 RPL39P62891 51 aaKnown RBP8.38□□□□□ -1.07
NEIL1-201ENST00000355059 HIGD1BQ9P298 99 aa8.38□□□□□ -1.07
NEIL1-201ENST00000355059 NIPBLQ6KC79 2804 aaeCLIP8.38□□□□□ -1.07
NEIL1-201ENST00000355059 SVEP1Q4LDE5 3571 aa8.38□□□□□ -1.07
NEIL1-201ENST00000355059 H3BUA1 57 aa8.38□□□□□ -1.07
NEIL1-201ENST00000355059 PMVKQ15126 192 aa8.38□□□□□ -1.07
NEIL1-201ENST00000355059 RRN3P1Q2M238 152 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms