RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 HIGD2AQ9BW72 106 aa6.3□□□□□ -1.4
SCN8A-201ENST00000354534 SIRPDQ9H106 197 aa6.3□□□□□ -1.4
SCN8A-201ENST00000354534 TMEM14CQ9P0S9 112 aa6.3□□□□□ -1.4
SCN8A-201ENST00000354534 HRCT1Q6UXD1 115 aa6.3□□□□□ -1.4
SCN8A-201ENST00000354534 Q6ZVQ6 151 aa6.3□□□□□ -1.4
SCN8A-201ENST00000354534 X6R8D5 127 aa6.3□□□□□ -1.4
SCN8A-201ENST00000354534 COL8A2P25067 703 aa6.3□□□□□ -1.4
SCN8A-201ENST00000354534 KIR2DL5BQ8NHK3 375 aa6.3□□□□□ -1.4
SCN8A-201ENST00000354534 GATA3P23771 443 aa6.3□□□□□ -1.4
SCN8A-201ENST00000354534 NDUFA4L2Q9NRX3 87 aa6.3□□□□□ -1.4
SCN8A-201ENST00000354534 UNQ6494/PRO21346Q6UXR6 183 aa6.3□□□□□ -1.4
SCN8A-201ENST00000354534 C3orf84H3BNL1 204 aa6.3□□□□□ -1.4
SCN8A-201ENST00000354534 K7EN84 100 aa6.3□□□□□ -1.4
SCN8A-201ENST00000354534 Q6P435 159 aa6.3□□□□□ -1.4
SCN8A-201ENST00000354534 DENND4CQ5VZ89 1909 aa6.3□□□□□ -1.4
SCN8A-201ENST00000354534 IGHV1-69DA0A0B4J2H0 117 aa6.3□□□□□ -1.4
SCN8A-201ENST00000354534 RPL39P62891 51 aaKnown RBP6.3□□□□□ -1.4
SCN8A-201ENST00000354534 HIVEP3Q5T1R4 2406 aa6.29□□□□□ -1.4
SCN8A-201ENST00000354534 PINLYPA6NC86 204 aa6.29□□□□□ -1.4
SCN8A-201ENST00000354534 HHLA3Q9XRX5 114 aa6.29□□□□□ -1.4
SCN8A-201ENST00000354534 FXYD5Q96DB9 178 aa6.29□□□□□ -1.4
SCN8A-201ENST00000354534 A0A0J9YXV3 536 aa6.29□□□□□ -1.4
SCN8A-201ENST00000354534 APRG1Q8IVJ8 170 aa6.29□□□□□ -1.4
SCN8A-201ENST00000354534 SPINK6Q6UWN8 80 aa6.29□□□□□ -1.4
SCN8A-201ENST00000354534 SOSTDC1Q6X4U4 206 aa6.29□□□□□ -1.4
SCN8A-201ENST00000354534 FAM19A3Q7Z5A8 133 aa6.29□□□□□ -1.4
SCN8A-201ENST00000354534 WFDC10AQ9H1F0 79 aa6.29□□□□□ -1.4
SCN8A-201ENST00000354534 TECTAO75443 2155 aa6.29□□□□□ -1.4
SCN8A-201ENST00000354534 IGKV1D-37A0A075B6S9 117 aa6.29□□□□□ -1.4
SCN8A-201ENST00000354534 Q8N9W7 124 aa6.29□□□□□ -1.4
SCN8A-201ENST00000354534 ZFYVE26Q68DK2 2539 aa6.29□□□□□ -1.4
SCN8A-201ENST00000354534 IGKV1D-17A0A075B6S4 117 aa6.28□□□□□ -1.4
SCN8A-201ENST00000354534 LINC00173Q6ZV60 143 aa6.28□□□□□ -1.4
SCN8A-201ENST00000354534 ZNF581Q9P0T4 197 aa6.28□□□□□ -1.4
SCN8A-201ENST00000354534 TRBV7-3A0A075B6L6 115 aa6.28□□□□□ -1.4
SCN8A-201ENST00000354534 IGKV2-24A0A0C4DH68 120 aa6.28□□□□□ -1.4
SCN8A-201ENST00000354534 SLPIP03973 132 aa6.28□□□□□ -1.4
SCN8A-201ENST00000354534 ATG2AQ2TAZ0 1938 aa6.28□□□□□ -1.4
SCN8A-201ENST00000354534 C1orf158Q8N1D5 194 aa6.28□□□□□ -1.4
SCN8A-201ENST00000354534 C16orf74Q96GX8 76 aa6.28□□□□□ -1.4
SCN8A-201ENST00000354534 CSDC2Q9Y534 153 aaKnown RBP6.28□□□□□ -1.4
SCN8A-201ENST00000354534 ZNF726P1Q15940 193 aa6.28□□□□□ -1.4
SCN8A-201ENST00000354534 CCL24O00175 119 aa6.27□□□□□ -1.41
SCN8A-201ENST00000354534 PSPHP1O15172 72 aa6.27□□□□□ -1.41
SCN8A-201ENST00000354534 A0A0G2JNJ9 132 aa6.27□□□□□ -1.41
SCN8A-201ENST00000354534 EPOPA6NHQ4 379 aa6.27□□□□□ -1.41
SCN8A-201ENST00000354534 E9PLD3 99 aa6.27□□□□□ -1.41
SCN8A-201ENST00000354534 Q9UFV3 132 aa6.27□□□□□ -1.41
SCN8A-201ENST00000354534 MSMBP08118 114 aa6.27□□□□□ -1.41
SCN8A-201ENST00000354534 GGNQ86UU5 652 aa6.27□□□□□ -1.41
SCN8A-201ENST00000354534 SPART-AS1P0CW21 52 aa6.27□□□□□ -1.41
SCN8A-201ENST00000354534 NLRC5Q86WI3 1866 aa6.27□□□□□ -1.41
SCN8A-201ENST00000354534 THSD7AQ9UPZ6 1657 aa6.27□□□□□ -1.41
SCN8A-201ENST00000354534 CRYGDP07320 174 aa6.27□□□□□ -1.41
SCN8A-201ENST00000354534 Q0VFX4 171 aa6.27□□□□□ -1.41
SCN8A-201ENST00000354534 KLK12Q9UKR0 248 aa6.27□□□□□ -1.41
SCN8A-201ENST00000354534 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.27□□□□□ -1.41
SCN8A-201ENST00000354534 UBE2D4Q9Y2X8 147 aa6.26□□□□□ -1.41
SCN8A-201ENST00000354534 IGHV1-58A0A0C4DH39 117 aa6.26□□□□□ -1.41
SCN8A-201ENST00000354534 K7EM74 188 aa6.26□□□□□ -1.41
SCN8A-201ENST00000354534 NDUFA11Q86Y39 141 aa6.26□□□□□ -1.41
SCN8A-201ENST00000354534 QRFPP83859 136 aa6.26□□□□□ -1.41
SCN8A-201ENST00000354534 C10orf91Q5T1B1 145 aa6.26□□□□□ -1.41
SCN8A-201ENST00000354534 HIGD1BQ9P298 99 aa6.26□□□□□ -1.41
SCN8A-201ENST00000354534 CCDC179H3BU77 68 aa6.26□□□□□ -1.41
SCN8A-201ENST00000354534 IGF1P05019 195 aa6.26□□□□□ -1.41
SCN8A-201ENST00000354534 WFDC13Q8IUB5 93 aa6.26□□□□□ -1.41
SCN8A-201ENST00000354534 PIFOQ8TCI5 191 aa6.26□□□□□ -1.41
SCN8A-201ENST00000354534 TOMM6Q96B49 74 aa6.26□□□□□ -1.41
SCN8A-201ENST00000354534 BRWD3Q6RI45 1802 aa6.25□□□□□ -1.41
SCN8A-201ENST00000354534 SMIM26A0A096LP01 95 aa6.25□□□□□ -1.41
SCN8A-201ENST00000354534 WT1P19544 449 aaPredicted RBP6.25□□□□□ -1.41
SCN8A-201ENST00000354534 POM121L12Q8N7R1 296 aa6.25□□□□□ -1.41
SCN8A-201ENST00000354534 IGHV1-69P01742 117 aa6.25□□□□□ -1.41
SCN8A-201ENST00000354534 ATP5EP2Q5VTU8 51 aa6.25□□□□□ -1.41
SCN8A-201ENST00000354534 NFE4Q86UQ8 179 aa6.25□□□□□ -1.41
SCN8A-201ENST00000354534 TNS1Q9HBL0 1735 aaKnown RBP6.25□□□□□ -1.41
SCN8A-201ENST00000354534 TTTY13Q9BZ97 58 aa6.25□□□□□ -1.41
SCN8A-201ENST00000354534 SETD2Q9BYW2 2564 aaPredicted RBP6.25□□□□□ -1.41
SCN8A-201ENST00000354534 A0A087WZ39 114 aa6.25□□□□□ -1.41
SCN8A-201ENST00000354534 Q6Q795 121 aa6.25□□□□□ -1.41
SCN8A-201ENST00000354534 C11orf86A6NJI1 115 aa6.25□□□□□ -1.41
SCN8A-201ENST00000354534 FAM19A1Q7Z5A9 133 aa6.25□□□□□ -1.41
SCN8A-201ENST00000354534 KAAG1Q9UBP8 84 aa6.25□□□□□ -1.41
SCN8A-201ENST00000354534 DEFB136Q30KP8 78 aa6.24□□□□□ -1.41
SCN8A-201ENST00000354534 LRRC75A-AS1Q8N1F1 130 aa6.24□□□□□ -1.41
SCN8A-201ENST00000354534 ZNF833PQ6ZTB9 187 aa6.24□□□□□ -1.41
SCN8A-201ENST00000354534 MIAQ16674 131 aa6.24□□□□□ -1.41
SCN8A-201ENST00000354534 TRBV7-6A0A0J9YX20 115 aa6.24□□□□□ -1.41
SCN8A-201ENST00000354534 RNF144BQ7Z419 303 aa6.24□□□□□ -1.41
SCN8A-201ENST00000354534 ZFHX2Q9C0A1 2572 aaPredicted RBP6.24□□□□□ -1.41
SCN8A-201ENST00000354534 IGKV1-17P01599 117 aa6.24□□□□□ -1.41
SCN8A-201ENST00000354534 TPSG1Q9NRR2 321 aa6.24□□□□□ -1.41
SCN8A-201ENST00000354534 CCKP06307 115 aa6.24□□□□□ -1.41
SCN8A-201ENST00000354534 F8P00451 2351 aa6.24□□□□□ -1.41
SCN8A-201ENST00000354534 EBI3Q14213 229 aa6.23□□□□□ -1.41
SCN8A-201ENST00000354534 LRRK2Q5S007 2527 aa6.23□□□□□ -1.41
SCN8A-201ENST00000354534 AGPAT4-IT1Q9H0P7 198 aa6.23□□□□□ -1.41
SCN8A-201ENST00000354534 NUP210Q8TEM1 1887 aaPredicted RBP6.23□□□□□ -1.41
SCN8A-201ENST00000354534 C22orf34Q6ZV56 151 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms