RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 RHOHQ15669 191 aa11.19□□□□□ -0.62
TRAF3-202ENST00000351691 ABCA4P78363 2273 aa11.18□□□□□ -0.62
TRAF3-202ENST00000351691 RPL39P62891 51 aaKnown RBP11.18□□□□□ -0.62
TRAF3-202ENST00000351691 C20orf173Q96LM9 149 aa11.18□□□□□ -0.62
TRAF3-202ENST00000351691 H7C2G1 150 aa11.17□□□□□ -0.62
TRAF3-202ENST00000351691 IGF1P05019 195 aa11.17□□□□□ -0.62
TRAF3-202ENST00000351691 COX6CP09669 75 aa11.17□□□□□ -0.62
TRAF3-202ENST00000351691 NSUN5P1Q3KNT7 163 aa11.17□□□□□ -0.62
TRAF3-202ENST00000351691 VPREB3Q9UKI3 123 aa11.17□□□□□ -0.62
TRAF3-202ENST00000351691 HRNRQ86YZ3 2850 aaPredicted RBP11.17□□□□□ -0.62
TRAF3-202ENST00000351691 ACYP1P07311 99 aa11.17□□□□□ -0.62
TRAF3-202ENST00000351691 ICOSQ9Y6W8 199 aa11.17□□□□□ -0.62
TRAF3-202ENST00000351691 ZNF22P17026 224 aaPredicted RBP11.16□□□□□ -0.62
TRAF3-202ENST00000351691 SUMO4Q6EEV6 95 aa11.16□□□□□ -0.62
TRAF3-202ENST00000351691 CLEC19AQ6UXS0 136 aa11.16□□□□□ -0.62
TRAF3-202ENST00000351691 TMEM101Q96IK0 257 aa11.16□□□□□ -0.62
TRAF3-202ENST00000351691 SPANXCQ9NY87 97 aa11.16□□□□□ -0.62
TRAF3-202ENST00000351691 ARHGAP32A7KAX9 2087 aa11.16□□□□□ -0.62
TRAF3-202ENST00000351691 A0A0J9YXY3 114 aa11.16□□□□□ -0.62
TRAF3-202ENST00000351691 GNLYP22749 145 aa11.15□□□□□ -0.62
TRAF3-202ENST00000351691 LMO4P61968 165 aa11.15□□□□□ -0.62
TRAF3-202ENST00000351691 ZNF56Q15929 161 aa11.15□□□□□ -0.62
TRAF3-202ENST00000351691 IGHV3OR16-13A0A075B7E8 117 aa11.15□□□□□ -0.63
TRAF3-202ENST00000351691 IGHV3-74A0A0B4J1X5 117 aa11.15□□□□□ -0.63
TRAF3-202ENST00000351691 A0A1W2PPR1 153 aa11.15□□□□□ -0.63
TRAF3-202ENST00000351691 SPRY2O43597 315 aa11.15□□□□□ -0.63
TRAF3-202ENST00000351691 UBTD1Q9HAC8 227 aa11.15□□□□□ -0.63
TRAF3-202ENST00000351691 DCHS2Q6V1P9 2916 aa11.14□□□□□ -0.63
TRAF3-202ENST00000351691 LST1O00453 97 aa11.14□□□□□ -0.63
TRAF3-202ENST00000351691 SOCS3O14543 225 aa11.14□□□□□ -0.63
TRAF3-202ENST00000351691 ATP6V0E1O15342 81 aa11.14□□□□□ -0.63
TRAF3-202ENST00000351691 GNRH2O43555 120 aa11.14□□□□□ -0.63
TRAF3-202ENST00000351691 SAA4P35542 130 aa11.14□□□□□ -0.63
TRAF3-202ENST00000351691 NPFFO15130 113 aa11.13□□□□□ -0.63
TRAF3-202ENST00000351691 ECSCRQ19T08 205 aa11.13□□□□□ -0.63
TRAF3-202ENST00000351691 LITAFQ99732 161 aa11.13□□□□□ -0.63
TRAF3-202ENST00000351691 CHCHD5Q9BSY4 110 aa11.13□□□□□ -0.63
TRAF3-202ENST00000351691 YAE1D1Q9NRH1 226 aa11.13□□□□□ -0.63
TRAF3-202ENST00000351691 ATP5G1P05496 136 aa11.13□□□□□ -0.63
TRAF3-202ENST00000351691 RNASE4P34096 147 aaKnown RBP11.13□□□□□ -0.63
TRAF3-202ENST00000351691 EPG5Q9HCE0 2579 aa11.13□□□□□ -0.63
TRAF3-202ENST00000351691 IGHV3-49A0A0A0MS15 119 aa11.12□□□□□ -0.63
TRAF3-202ENST00000351691 PRB1P04280 392 aa11.12□□□□□ -0.63
TRAF3-202ENST00000351691 DNAJC30Q96LL9 226 aa11.12□□□□□ -0.63
TRAF3-202ENST00000351691 COL12A1Q99715 3063 aa11.12□□□□□ -0.63
TRAF3-202ENST00000351691 J3KRW8 73 aa11.12□□□□□ -0.63
TRAF3-202ENST00000351691 NRGNQ92686 78 aa11.12□□□□□ -0.63
TRAF3-202ENST00000351691 BEX4Q9NWD9 120 aaPredicted RBP11.12□□□□□ -0.63
TRAF3-202ENST00000351691 C5orf56Q8N8D9 126 aa11.11□□□□□ -0.63
TRAF3-202ENST00000351691 BPESC1Q9GZL8 116 aa11.1□□□□□ -0.63
TRAF3-202ENST00000351691 TRGV11A0A075B6L2 103 aa11.09□□□□□ -0.63
TRAF3-202ENST00000351691 FAM223BA6NKX1 122 aa11.09□□□□□ -0.63
TRAF3-202ENST00000351691 MIAQ16674 131 aa11.09□□□□□ -0.63
TRAF3-202ENST00000351691 FAM223AQ8IWN6 122 aa11.09□□□□□ -0.63
TRAF3-202ENST00000351691 C3orf22Q8N5N4 141 aa11.09□□□□□ -0.63
TRAF3-202ENST00000351691 C20orf203Q8NBC4 194 aa11.09□□□□□ -0.63
TRAF3-202ENST00000351691 BBC3Q96PG8 261 aaPredicted RBP11.09□□□□□ -0.63
TRAF3-202ENST00000351691 MOB4Q9Y3A3 225 aa11.09□□□□□ -0.63
TRAF3-202ENST00000351691 MUC4Q99102 2169 aa11.09□□□□□ -0.63
TRAF3-202ENST00000351691 IGHV3-30-3P0DP02 117 aa11.09□□□□□ -0.63
TRAF3-202ENST00000351691 DUX3Q96PT4 197 aa11.09□□□□□ -0.63
TRAF3-202ENST00000351691 KLLNB2CW77 178 aa11.08□□□□□ -0.64
TRAF3-202ENST00000351691 C19orf54Q5BKX5 351 aa11.08□□□□□ -0.64
TRAF3-202ENST00000351691 FLNCQ14315 2725 aa11.08□□□□□ -0.64
TRAF3-202ENST00000351691 F5H697 171 aa11.08□□□□□ -0.64
TRAF3-202ENST00000351691 TIMM17BO60830 172 aa11.08□□□□□ -0.64
TRAF3-202ENST00000351691 TIMM21Q9BVV7 248 aa11.08□□□□□ -0.64
TRAF3-202ENST00000351691 PPDPFQ9H3Y8 114 aa11.08□□□□□ -0.64
TRAF3-202ENST00000351691 IGLV4-3A0A075B6K6 122 aa11.07□□□□□ -0.64
TRAF3-202ENST00000351691 A0A0J9YXV3 536 aa11.07□□□□□ -0.64
TRAF3-202ENST00000351691 G3V318 75 aa11.07□□□□□ -0.64
TRAF3-202ENST00000351691 UQCRQO14949 82 aa11.07□□□□□ -0.64
TRAF3-202ENST00000351691 PYGO1Q9Y3Y4 419 aa11.07□□□□□ -0.64
TRAF3-202ENST00000351691 NDUFA7O95182 113 aa11.07□□□□□ -0.64
TRAF3-202ENST00000351691 LINC00643Q86TS7 51 aa11.07□□□□□ -0.64
TRAF3-202ENST00000351691 TRAV41A0A0B4J266 112 aa11.06□□□□□ -0.64
TRAF3-202ENST00000351691 FAM236AA0A1B0GUQ0 79 aa11.06□□□□□ -0.64
TRAF3-202ENST00000351691 FAM236BA0A1B0GV22 79 aa11.06□□□□□ -0.64
TRAF3-202ENST00000351691 I3L3M4 83 aa11.06□□□□□ -0.64
TRAF3-202ENST00000351691 M0QY20 66 aa11.06□□□□□ -0.64
TRAF3-202ENST00000351691 NDUFA4O00483 81 aa11.06□□□□□ -0.64
TRAF3-202ENST00000351691 MRPS36P82909 103 aaKnown RBP11.06□□□□□ -0.64
TRAF3-202ENST00000351691 SDIM1Q6ZPB5 146 aa11.06□□□□□ -0.64
TRAF3-202ENST00000351691 TMEM61Q8N0U2 210 aa11.06□□□□□ -0.64
TRAF3-202ENST00000351691 LRRC75A-AS1Q8N1F1 130 aa11.06□□□□□ -0.64
TRAF3-202ENST00000351691 LINC00526Q96FQ7 95 aa11.06□□□□□ -0.64
TRAF3-202ENST00000351691 IGHV1-58A0A0C4DH39 117 aa11.05□□□□□ -0.64
TRAF3-202ENST00000351691 A0A1B0GX51 115 aa11.05□□□□□ -0.64
TRAF3-202ENST00000351691 CXCL5P42830 114 aa11.05□□□□□ -0.64
TRAF3-202ENST00000351691 OPRPNQ99935 248 aaPredicted RBP11.05□□□□□ -0.64
TRAF3-202ENST00000351691 JPT2Q9H910 190 aa11.05□□□□□ -0.64
TRAF3-202ENST00000351691 ZNF256Q9Y2P7 627 aaPredicted RBP11.05□□□□□ -0.64
TRAF3-202ENST00000351691 AKAP6Q13023 2319 aa11.05□□□□□ -0.64
TRAF3-202ENST00000351691 A0A087WWL8 130 aa11.05□□□□□ -0.64
TRAF3-202ENST00000351691 C9orf153Q5TBE3 101 aa11.05□□□□□ -0.64
TRAF3-202ENST00000351691 CLEC2BQ92478 149 aa11.05□□□□□ -0.64
TRAF3-202ENST00000351691 C9orf85Q96MD7 179 aa11.05□□□□□ -0.64
TRAF3-202ENST00000351691 SPTAN1Q13813 2472 aaKnown RBP11.05□□□□□ -0.64
TRAF3-202ENST00000351691 IGHV3-64A0A075B6Q5 118 aa11.04□□□□□ -0.64
TRAF3-202ENST00000351691 H3BUA1 57 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms