RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 EDN2P20800 178 aa6□□□□□ -1.45
KPNA1-201ENST00000344337 MRPL52Q86TS9 123 aaKnown RBP6□□□□□ -1.45
KPNA1-201ENST00000344337 C19orf71A6NCJ1 209 aa6□□□□□ -1.45
KPNA1-201ENST00000344337 CR1LQ2VPA4 569 aa6□□□□□ -1.45
KPNA1-201ENST00000344337 CRPP02741 224 aa5.99□□□□□ -1.45
KPNA1-201ENST00000344337 HAMPP81172 84 aa5.99□□□□□ -1.45
KPNA1-201ENST00000344337 FASNP49327 2511 aaKnown RBP5.99□□□□□ -1.45
KPNA1-201ENST00000344337 A0A0J9YY99 117 aa5.99□□□□□ -1.45
KPNA1-201ENST00000344337 SLURP1P55000 103 aa5.99□□□□□ -1.45
KPNA1-201ENST00000344337 Q6ZSR3 168 aa5.99□□□□□ -1.45
KPNA1-201ENST00000344337 C9orf139Q6ZV77 190 aa5.99□□□□□ -1.45
KPNA1-201ENST00000344337 XCL1P47992 114 aa5.99□□□□□ -1.45
KPNA1-201ENST00000344337 Q9H8V8 135 aa5.99□□□□□ -1.45
KPNA1-201ENST00000344337 DAZ1Q9NQZ3 744 aaKnown RBP5.99□□□□□ -1.45
KPNA1-201ENST00000344337 A0A1B0GXF2 115 aa5.99□□□□□ -1.45
KPNA1-201ENST00000344337 FOXI1Q12951 378 aa5.99□□□□□ -1.45
KPNA1-201ENST00000344337 PDE6HQ13956 83 aa5.99□□□□□ -1.45
KPNA1-201ENST00000344337 LGALS1P09382 135 aaKnown RBP5.99□□□□□ -1.45
KPNA1-201ENST00000344337 COL4A4P53420 1690 aaPredicted RBP5.99□□□□□ -1.45
KPNA1-201ENST00000344337 GATA4P43694 442 aa5.99□□□□□ -1.45
KPNA1-201ENST00000344337 LY6G5BQ8NDX9 201 aa5.98□□□□□ -1.45
KPNA1-201ENST00000344337 FANCD2OSQ96PS1 177 aa5.98□□□□□ -1.45
KPNA1-201ENST00000344337 FAM236AA0A1B0GUQ0 79 aa5.98□□□□□ -1.45
KPNA1-201ENST00000344337 FAM236BA0A1B0GV22 79 aa5.98□□□□□ -1.45
KPNA1-201ENST00000344337 BUB3O43684 328 aa5.98□□□□□ -1.45
KPNA1-201ENST00000344337 BSNQ9UPA5 3926 aa5.98□□□□□ -1.45
KPNA1-201ENST00000344337 CFC1BP0CG36 223 aa5.98□□□□□ -1.45
KPNA1-201ENST00000344337 CFC1P0CG37 223 aa5.98□□□□□ -1.45
KPNA1-201ENST00000344337 SRSF2Q01130 221 aaKnown RBP5.98□□□□□ -1.45
KPNA1-201ENST00000344337 POU2AF1Q16633 256 aa5.98□□□□□ -1.45
KPNA1-201ENST00000344337 Q8N1Y9 231 aa5.98□□□□□ -1.45
KPNA1-201ENST00000344337 AJUBAQ96IF1 538 aa5.98□□□□□ -1.45
KPNA1-201ENST00000344337 DAD1P61803 113 aa5.98□□□□□ -1.45
KPNA1-201ENST00000344337 CFAP161Q6P656 301 aa5.97□□□□□ -1.45
KPNA1-201ENST00000344337 Q6ZS46 218 aa5.97□□□□□ -1.45
KPNA1-201ENST00000344337 NOP10Q9NPE3 64 aaKnown RBP5.97□□□□□ -1.45
KPNA1-201ENST00000344337 YAE1D1Q9NRH1 226 aa5.97□□□□□ -1.45
KPNA1-201ENST00000344337 TMEM14CQ9P0S9 112 aa5.97□□□□□ -1.45
KPNA1-201ENST00000344337 EIF4EBP1Q13541 118 aaPredicted RBP5.97□□□□□ -1.45
KPNA1-201ENST00000344337 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.97□□□□□ -1.45
KPNA1-201ENST00000344337 Q8N9W7 124 aa5.97□□□□□ -1.45
KPNA1-201ENST00000344337 DEFB105AQ8NG35 78 aa5.97□□□□□ -1.45
KPNA1-201ENST00000344337 MUC22E2RYF6 1773 aaPredicted RBP5.97□□□□□ -1.45
KPNA1-201ENST00000344337 IGHV4-28A0A0C4DH34 117 aa5.96□□□□□ -1.45
KPNA1-201ENST00000344337 I3L3M4 83 aa5.96□□□□□ -1.45
KPNA1-201ENST00000344337 SLPIP03973 132 aa5.96□□□□□ -1.45
KPNA1-201ENST00000344337 MLST8Q9BVC4 326 aa5.96□□□□□ -1.45
KPNA1-201ENST00000344337 MRAPQ8TCY5 172 aa5.96□□□□□ -1.46
KPNA1-201ENST00000344337 C20orf173Q96LM9 149 aa5.96□□□□□ -1.46
KPNA1-201ENST00000344337 IGHV1OR15-1A0A075B7D0 117 aa5.96□□□□□ -1.46
KPNA1-201ENST00000344337 TRAV25A0A0B4J276 109 aa5.96□□□□□ -1.46
KPNA1-201ENST00000344337 PRSS22Q9GZN4 317 aa5.96□□□□□ -1.46
KPNA1-201ENST00000344337 IGLV11-55A0A075B6I3 123 aa5.96□□□□□ -1.46
KPNA1-201ENST00000344337 HERV-K104P63124 156 aa5.96□□□□□ -1.46
KPNA1-201ENST00000344337 ZNF580Q9UK33 172 aa5.96□□□□□ -1.46
KPNA1-201ENST00000344337 RBMY1BA6NDE4 496 aaKnown RBP5.96□□□□□ -1.46
KPNA1-201ENST00000344337 RBMY1EA6NEQ0 496 aaKnown RBP5.96□□□□□ -1.46
KPNA1-201ENST00000344337 RBMY1DP0C7P1 496 aaKnown RBP5.96□□□□□ -1.46
KPNA1-201ENST00000344337 RBMY1A1P0DJD3 496 aaKnown RBP5.96□□□□□ -1.46
KPNA1-201ENST00000344337 RBMY1CP0DJD4 496 aa5.96□□□□□ -1.46
KPNA1-201ENST00000344337 RPL36AP83881 106 aaKnown RBP5.96□□□□□ -1.46
KPNA1-201ENST00000344337 RPL36ALQ969Q0 106 aaKnown RBP5.96□□□□□ -1.46
KPNA1-201ENST00000344337 U3KQE9 123 aa5.96□□□□□ -1.46
KPNA1-201ENST00000344337 LEPROTO15243 131 aa5.95□□□□□ -1.46
KPNA1-201ENST00000344337 BAALC-AS2P0C853 105 aa5.95□□□□□ -1.46
KPNA1-201ENST00000344337 FAM110DQ8TAY7 271 aaPredicted RBP5.95□□□□□ -1.46
KPNA1-201ENST00000344337 C11orf21Q9P2W6 132 aa5.95□□□□□ -1.46
KPNA1-201ENST00000344337 SMAD5-AS1Q9Y6J3 95 aa5.95□□□□□ -1.46
KPNA1-201ENST00000344337 IGHV4-61A0A0C4DH41 118 aa5.95□□□□□ -1.46
KPNA1-201ENST00000344337 CRYGCP07315 174 aa5.95□□□□□ -1.46
KPNA1-201ENST00000344337 MORN3Q6PF18 240 aaPredicted RBP5.95□□□□□ -1.46
KPNA1-201ENST00000344337 TRGV11A0A075B6L2 103 aa5.94□□□□□ -1.46
KPNA1-201ENST00000344337 SPANXB1Q9NS25 103 aaPredicted RBP5.94□□□□□ -1.46
KPNA1-201ENST00000344337 CRIP2P52943 208 aaPredicted RBP5.94□□□□□ -1.46
KPNA1-201ENST00000344337 CDSNQ15517 529 aa5.94□□□□□ -1.46
KPNA1-201ENST00000344337 EPG5Q9HCE0 2579 aa5.94□□□□□ -1.46
KPNA1-201ENST00000344337 CRLF1O75462 422 aa5.94□□□□□ -1.46
KPNA1-201ENST00000344337 TMEM141Q96I45 108 aa5.94□□□□□ -1.46
KPNA1-201ENST00000344337 UBE2E1P51965 193 aa5.94□□□□□ -1.46
KPNA1-201ENST00000344337 DEFB112Q30KQ8 113 aa5.94□□□□□ -1.46
KPNA1-201ENST00000344337 Q6ZUT4 128 aa5.94□□□□□ -1.46
KPNA1-201ENST00000344337 RASL10AQ92737 203 aa5.94□□□□□ -1.46
KPNA1-201ENST00000344337 SPATA25Q9BR10 227 aa5.94□□□□□ -1.46
KPNA1-201ENST00000344337 IGHV1-69DA0A0B4J2H0 117 aa5.94□□□□□ -1.46
KPNA1-201ENST00000344337 IGLV2-11P01706 119 aa5.94□□□□□ -1.46
KPNA1-201ENST00000344337 IGHV1-69P01742 117 aa5.94□□□□□ -1.46
KPNA1-201ENST00000344337 PRR9Q5T870 116 aa5.94□□□□□ -1.46
KPNA1-201ENST00000344337 MINOS1Q5TGZ0 78 aa5.94□□□□□ -1.46
KPNA1-201ENST00000344337 MINOS1-NBL1R4GNA1 71 aa5.94□□□□□ -1.46
KPNA1-201ENST00000344337 IGHV4-30-2A0A087WSY4 118 aa5.93□□□□□ -1.46
KPNA1-201ENST00000344337 NDUFA7O95182 113 aa5.93□□□□□ -1.46
KPNA1-201ENST00000344337 IGLV1-47P01700 117 aa5.93□□□□□ -1.46
KPNA1-201ENST00000344337 CENPVL3A0A0U1RRI6 287 aa5.93□□□□□ -1.46
KPNA1-201ENST00000344337 PIK3CD-AS1Q5SR53 167 aa5.93□□□□□ -1.46
KPNA1-201ENST00000344337 LINC00311Q8N616 119 aa5.93□□□□□ -1.46
KPNA1-201ENST00000344337 RNF185Q96GF1 192 aa5.93□□□□□ -1.46
KPNA1-201ENST00000344337 TEN1Q86WV5 123 aa5.92□□□□□ -1.46
KPNA1-201ENST00000344337 LINC00526Q96FQ7 95 aa5.92□□□□□ -1.46
KPNA1-201ENST00000344337 CCDC179H3BU77 68 aa5.92□□□□□ -1.46
KPNA1-201ENST00000344337 CGB3P0DN86 165 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms