RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 MRPL20Q9BYC9 149 aaKnown RBP5.47□□□□□ -1.53
ZNF540-202ENST00000343599 FGF23Q9GZV9 251 aaPredicted RBP5.47□□□□□ -1.53
ZNF540-202ENST00000343599 PRNDQ9UKY0 176 aa5.47□□□□□ -1.53
ZNF540-202ENST00000343599 CNTFRP26992 372 aa5.47□□□□□ -1.53
ZNF540-202ENST00000343599 C17orf58Q2M2W7 97 aa5.47□□□□□ -1.53
ZNF540-202ENST00000343599 DUX4L9Q6RFH8 374 aaPredicted RBP5.47□□□□□ -1.53
ZNF540-202ENST00000343599 HRCT1Q6UXD1 115 aa5.47□□□□□ -1.53
ZNF540-202ENST00000343599 D6R8Y8 96 aa5.46□□□□□ -1.53
ZNF540-202ENST00000343599 OVOL1O14753 267 aa5.46□□□□□ -1.53
ZNF540-202ENST00000343599 CDK2AP2O75956 126 aa5.46□□□□□ -1.53
ZNF540-202ENST00000343599 FCER1GP30273 86 aa5.46□□□□□ -1.53
ZNF540-202ENST00000343599 LOC389332A0A1B0GUA5 103 aa5.46□□□□□ -1.54
ZNF540-202ENST00000343599 NCBP2LA6PVI3 153 aaKnown RBP5.46□□□□□ -1.54
ZNF540-202ENST00000343599 INS-IGF2F8WCM5 200 aa5.46□□□□□ -1.54
ZNF540-202ENST00000343599 K7EMT4 169 aa5.46□□□□□ -1.54
ZNF540-202ENST00000343599 ARMS2P0C7Q2 107 aa5.46□□□□□ -1.54
ZNF540-202ENST00000343599 HLA-DMBP28068 263 aa5.46□□□□□ -1.54
ZNF540-202ENST00000343599 GAGE2AQ6NT46 116 aa5.46□□□□□ -1.54
ZNF540-202ENST00000343599 ORMDL3Q8N138 153 aa5.46□□□□□ -1.54
ZNF540-202ENST00000343599 Q8N9W7 124 aa5.46□□□□□ -1.54
ZNF540-202ENST00000343599 TMEM190Q8WZ59 177 aa5.46□□□□□ -1.54
ZNF540-202ENST00000343599 S1PR3Q99500 378 aa5.46□□□□□ -1.54
ZNF540-202ENST00000343599 FAM236AA0A1B0GUQ0 79 aa5.46□□□□□ -1.54
ZNF540-202ENST00000343599 FAM236BA0A1B0GV22 79 aa5.46□□□□□ -1.54
ZNF540-202ENST00000343599 TINCRA0A1B0GVN0 87 aa5.46□□□□□ -1.54
ZNF540-202ENST00000343599 COX7CP15954 63 aa5.46□□□□□ -1.54
ZNF540-202ENST00000343599 AMN1Q8IY45 258 aa5.46□□□□□ -1.54
ZNF540-202ENST00000343599 CCL13Q99616 98 aa5.46□□□□□ -1.54
ZNF540-202ENST00000343599 AAMDCQ9H7C9 122 aa5.46□□□□□ -1.54
ZNF540-202ENST00000343599 OXTP01178 125 aa5.45□□□□□ -1.54
ZNF540-202ENST00000343599 FXYD7P58549 80 aa5.45□□□□□ -1.54
ZNF540-202ENST00000343599 TMEM258P61165 79 aa5.45□□□□□ -1.54
ZNF540-202ENST00000343599 DEFB121Q5J5C9 76 aa5.45□□□□□ -1.54
ZNF540-202ENST00000343599 LINC01561Q8N1V8 128 aa5.45□□□□□ -1.54
ZNF540-202ENST00000343599 FXYD5Q96DB9 178 aa5.45□□□□□ -1.54
ZNF540-202ENST00000343599 LINC00477Q96M19 166 aa5.45□□□□□ -1.54
ZNF540-202ENST00000343599 IGKV1OR2-108A0A075B7D4 117 aa5.45□□□□□ -1.54
ZNF540-202ENST00000343599 MORN5Q5VZ52 161 aa5.45□□□□□ -1.54
ZNF540-202ENST00000343599 FAM104BQ5XKR9 115 aa5.45□□□□□ -1.54
ZNF540-202ENST00000343599 GPHB5Q86YW7 130 aa5.45□□□□□ -1.54
ZNF540-202ENST00000343599 NTN5Q8WTR8 489 aaPredicted RBP5.45□□□□□ -1.54
ZNF540-202ENST00000343599 C2orf48Q96LS8 159 aa5.45□□□□□ -1.54
ZNF540-202ENST00000343599 PAXXQ9BUH6 204 aa5.45□□□□□ -1.54
ZNF540-202ENST00000343599 ZFHX3Q15911 3703 aa5.45□□□□□ -1.54
ZNF540-202ENST00000343599 ADGRG4Q8IZF6 3080 aa5.44□□□□□ -1.54
ZNF540-202ENST00000343599 TRGV11A0A075B6L2 103 aa5.44□□□□□ -1.54
ZNF540-202ENST00000343599 LINC00473A8K010 186 aa5.44□□□□□ -1.54
ZNF540-202ENST00000343599 F5H697 171 aa5.44□□□□□ -1.54
ZNF540-202ENST00000343599 BRD3OSQ6XYD6 125 aa5.44□□□□□ -1.54
ZNF540-202ENST00000343599 JPT2Q9H910 190 aa5.44□□□□□ -1.54
ZNF540-202ENST00000343599 NIPBLQ6KC79 2804 aaeCLIP5.44□□□□□ -1.54
ZNF540-202ENST00000343599 PLNP26678 52 aa5.44□□□□□ -1.54
ZNF540-202ENST00000343599 PVRIGQ6DKI7 326 aa5.44□□□□□ -1.54
ZNF540-202ENST00000343599 PRR14LQ5THK1 2151 aa5.44□□□□□ -1.54
ZNF540-202ENST00000343599 TRBV6-1A0A0K0K1D8 114 aa5.44□□□□□ -1.54
ZNF540-202ENST00000343599 PRSS1P07477 247 aa5.44□□□□□ -1.54
ZNF540-202ENST00000343599 P0DMU3 169 aa5.44□□□□□ -1.54
ZNF540-202ENST00000343599 FAM231AP0DMU4 169 aa5.44□□□□□ -1.54
ZNF540-202ENST00000343599 FAM231CP0DMU5 169 aa5.44□□□□□ -1.54
ZNF540-202ENST00000343599 PMVKQ15126 192 aa5.44□□□□□ -1.54
ZNF540-202ENST00000343599 ZNF56Q15929 161 aa5.44□□□□□ -1.54
ZNF540-202ENST00000343599 RETNQ9HD89 108 aa5.44□□□□□ -1.54
ZNF540-202ENST00000343599 TEX49A0A1B0GTD5 131 aa5.43□□□□□ -1.54
ZNF540-202ENST00000343599 TMEM30CPA0ZSE6 113 aa5.43□□□□□ -1.54
ZNF540-202ENST00000343599 PYYP10082 97 aa5.43□□□□□ -1.54
ZNF540-202ENST00000343599 SFTA2Q6UW10 78 aa5.43□□□□□ -1.54
ZNF540-202ENST00000343599 FAM216BQ8N7L0 139 aa5.43□□□□□ -1.54
ZNF540-202ENST00000343599 LINC00476Q8WZB0 136 aa5.43□□□□□ -1.54
ZNF540-202ENST00000343599 H3BMM0 161 aa5.43□□□□□ -1.54
ZNF540-202ENST00000343599 MRPS12O15235 138 aaKnown RBP5.43□□□□□ -1.54
ZNF540-202ENST00000343599 PATE4P0C8F1 98 aa5.43□□□□□ -1.54
ZNF540-202ENST00000343599 CEMP1Q6PRD7 247 aaPredicted RBP5.43□□□□□ -1.54
ZNF540-202ENST00000343599 UBE2WQ96B02 151 aa5.43□□□□□ -1.54
ZNF540-202ENST00000343599 ABCA1O95477 2261 aa5.43□□□□□ -1.54
ZNF540-202ENST00000343599 A0A1B0GVY2 172 aa5.42□□□□□ -1.54
ZNF540-202ENST00000343599 MRPL51Q4U2R6 128 aaKnown RBP5.42□□□□□ -1.54
ZNF540-202ENST00000343599 Q86TA4 180 aa5.42□□□□□ -1.54
ZNF540-202ENST00000343599 MRPL35Q9NZE8 188 aaKnown RBP5.42□□□□□ -1.54
ZNF540-202ENST00000343599 IGHV1-3A0A0C4DH29 117 aa5.42□□□□□ -1.54
ZNF540-202ENST00000343599 TRACP01848 142 aa5.42□□□□□ -1.54
ZNF540-202ENST00000343599 LEPP41159 167 aa5.42□□□□□ -1.54
ZNF540-202ENST00000343599 TMEM170BQ5T4T1 132 aa5.42□□□□□ -1.54
ZNF540-202ENST00000343599 PYGO1Q9Y3Y4 419 aa5.42□□□□□ -1.54
ZNF540-202ENST00000343599 TRBV10-2A0A0K0K1G8 114 aa5.42□□□□□ -1.54
ZNF540-202ENST00000343599 C15orf61A6NNL5 157 aa5.42□□□□□ -1.54
ZNF540-202ENST00000343599 CFC1BP0CG36 223 aa5.42□□□□□ -1.54
ZNF540-202ENST00000343599 CFC1P0CG37 223 aa5.42□□□□□ -1.54
ZNF540-202ENST00000343599 LINC00527Q9UJ94 153 aa5.42□□□□□ -1.54
ZNF540-202ENST00000343599 V9GYY9 64 aa5.42□□□□□ -1.54
ZNF540-202ENST00000343599 SETD2Q9BYW2 2564 aaPredicted RBP5.41□□□□□ -1.54
ZNF540-202ENST00000343599 CELSR1Q9NYQ6 3014 aa5.41□□□□□ -1.54
ZNF540-202ENST00000343599 POLQO75417 2590 aa5.41□□□□□ -1.54
ZNF540-202ENST00000343599 PGPA6NDG6 321 aa5.41□□□□□ -1.54
ZNF540-202ENST00000343599 TCRAP04437 139 aa5.41□□□□□ -1.54
ZNF540-202ENST00000343599 HIST1H4AP62805 103 aaKnown RBP5.41□□□□□ -1.54
ZNF540-202ENST00000343599 UBALD1Q8TB05 177 aa5.41□□□□□ -1.54
ZNF540-202ENST00000343599 FAM19A4Q96LR4 140 aa5.41□□□□□ -1.54
ZNF540-202ENST00000343599 TMEM14BQ9NUH8 114 aa5.41□□□□□ -1.54
ZNF540-202ENST00000343599 TRAV3A0A0B4J244 114 aa5.41□□□□□ -1.54
ZNF540-202ENST00000343599 IGLV2-11P01706 119 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms