RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 MLST8Q9BVC4 326 aa9.35□□□□□ -0.91
SEMA6A-202ENST00000343348 NDUFA1O15239 70 aa9.35□□□□□ -0.91
SEMA6A-202ENST00000343348 LOXL1Q08397 574 aaPredicted RBP9.35□□□□□ -0.91
SEMA6A-202ENST00000343348 DEFB135Q30KP9 77 aa9.35□□□□□ -0.91
SEMA6A-202ENST00000343348 SDIM1Q6ZPB5 146 aa9.35□□□□□ -0.91
SEMA6A-202ENST00000343348 TRBV12-3P01733 135 aa9.35□□□□□ -0.91
SEMA6A-202ENST00000343348 TP73-AS1Q9UF72 201 aa9.34□□□□□ -0.91
SEMA6A-202ENST00000343348 SPAG11BQ08648 103 aa9.34□□□□□ -0.91
SEMA6A-202ENST00000343348 C5orf56Q8N8D9 126 aa9.34□□□□□ -0.91
SEMA6A-202ENST00000343348 UPK3BQ9BT76 320 aa9.34□□□□□ -0.91
SEMA6A-202ENST00000343348 SPATA12Q7Z6I5 190 aa9.34□□□□□ -0.91
SEMA6A-202ENST00000343348 Q8N9W7 124 aa9.34□□□□□ -0.91
SEMA6A-202ENST00000343348 A0A096LNI7 61 aa9.33□□□□□ -0.92
SEMA6A-202ENST00000343348 C2orf70A6NJV1 201 aa9.33□□□□□ -0.92
SEMA6A-202ENST00000343348 TMEM256-PLSCR3K7ERE1 68 aa9.33□□□□□ -0.92
SEMA6A-202ENST00000343348 Q6ZUT4 128 aa9.33□□□□□ -0.92
SEMA6A-202ENST00000343348 WT1P19544 449 aaPredicted RBP9.32□□□□□ -0.92
SEMA6A-202ENST00000343348 SEC61GP60059 68 aa9.32□□□□□ -0.92
SEMA6A-202ENST00000343348 HIGD1BQ9P298 99 aa9.32□□□□□ -0.92
SEMA6A-202ENST00000343348 PLXNB1O43157 2135 aa9.32□□□□□ -0.92
SEMA6A-202ENST00000343348 TEX22C9J3V5 150 aa9.32□□□□□ -0.92
SEMA6A-202ENST00000343348 SLX1AQ9BQ83 275 aa9.32□□□□□ -0.92
SEMA6A-202ENST00000343348 TP53TG3Q9ULZ0 132 aa9.32□□□□□ -0.92
SEMA6A-202ENST00000343348 JMJD7-PLA2G4BH0Y9G9 81 aa9.32□□□□□ -0.92
SEMA6A-202ENST00000343348 MT-ATP8P03928 68 aa9.32□□□□□ -0.92
SEMA6A-202ENST00000343348 SLPIP03973 132 aa9.32□□□□□ -0.92
SEMA6A-202ENST00000343348 C4orf48Q5BLP8 95 aa9.32□□□□□ -0.92
SEMA6A-202ENST00000343348 TEX49A0A1B0GTD5 131 aa9.32□□□□□ -0.92
SEMA6A-202ENST00000343348 FANCD2OSQ96PS1 177 aa9.32□□□□□ -0.92
SEMA6A-202ENST00000343348 SIRPDQ9H106 197 aa9.32□□□□□ -0.92
SEMA6A-202ENST00000343348 NDUFA11Q86Y39 141 aa9.32□□□□□ -0.92
SEMA6A-202ENST00000343348 IGHV1-58A0A0C4DH39 117 aa9.31□□□□□ -0.92
SEMA6A-202ENST00000343348 UNQ9165/PRO28630Q6UXU0 137 aa9.3□□□□□ -0.92
SEMA6A-202ENST00000343348 TMEM131Q92545 1883 aa9.3□□□□□ -0.92
SEMA6A-202ENST00000343348 IGKV2-24A0A0C4DH68 120 aa9.3□□□□□ -0.92
SEMA6A-202ENST00000343348 IGLV2-14P01704 120 aa9.3□□□□□ -0.92
SEMA6A-202ENST00000343348 A0A0J9YWU9 116 aa9.3□□□□□ -0.92
SEMA6A-202ENST00000343348 RIF1Q5UIP0 2472 aaKnown RBP9.3□□□□□ -0.92
SEMA6A-202ENST00000343348 FREM1Q5H8C1 2179 aa9.3□□□□□ -0.92
SEMA6A-202ENST00000343348 PCDH15Q96QU1 1955 aa9.3□□□□□ -0.92
SEMA6A-202ENST00000343348 Q8NFD4 153 aa9.29□□□□□ -0.92
SEMA6A-202ENST00000343348 NDUFV3P56181 108 aaKnown RBP9.29□□□□□ -0.92
SEMA6A-202ENST00000343348 DEFB113Q30KQ7 82 aa9.29□□□□□ -0.92
SEMA6A-202ENST00000343348 C20orf197Q8N268 126 aa9.29□□□□□ -0.92
SEMA6A-202ENST00000343348 TMEM263Q8WUH6 116 aaKnown RBP9.29□□□□□ -0.92
SEMA6A-202ENST00000343348 CTRLP40313 264 aa9.29□□□□□ -0.92
SEMA6A-202ENST00000343348 RNF152Q8N8N0 203 aa9.29□□□□□ -0.92
SEMA6A-202ENST00000343348 ZFP36P26651 326 aaKnown RBP9.28□□□□□ -0.92
SEMA6A-202ENST00000343348 RNF138Q8WVD3 245 aa9.28□□□□□ -0.92
SEMA6A-202ENST00000343348 IGLC6P0CF74 106 aa9.28□□□□□ -0.92
SEMA6A-202ENST00000343348 COX7BP24311 80 aa9.28□□□□□ -0.92
SEMA6A-202ENST00000343348 ODF3L1Q8IXM7 274 aa9.28□□□□□ -0.92
SEMA6A-202ENST00000343348 H3BT86 120 aa9.27□□□□□ -0.93
SEMA6A-202ENST00000343348 MIAQ16674 131 aa9.27□□□□□ -0.93
SEMA6A-202ENST00000343348 LINC00322Q6ZN03 302 aaPredicted RBP9.27□□□□□ -0.93
SEMA6A-202ENST00000343348 PKIGQ9Y2B9 76 aa9.27□□□□□ -0.93
SEMA6A-202ENST00000343348 LRCOL1A6NCL2 159 aa9.27□□□□□ -0.93
SEMA6A-202ENST00000343348 ZNF80P51504 273 aaPredicted RBP9.27□□□□□ -0.93
SEMA6A-202ENST00000343348 BPY2O14599 106 aa9.27□□□□□ -0.93
SEMA6A-202ENST00000343348 ENHOQ6UWT2 76 aa9.26□□□□□ -0.93
SEMA6A-202ENST00000343348 A0A0J9YXY3 114 aa9.26□□□□□ -0.93
SEMA6A-202ENST00000343348 H3BQ85 93 aa9.26□□□□□ -0.93
SEMA6A-202ENST00000343348 GDF5OSQ5U4N7 250 aa9.26□□□□□ -0.93
SEMA6A-202ENST00000343348 LINC00269Q8N2A0 174 aa9.26□□□□□ -0.93
SEMA6A-202ENST00000343348 NUP210Q8TEM1 1887 aaPredicted RBP9.26□□□□□ -0.93
SEMA6A-202ENST00000343348 C2orf16Q68DN1 1984 aa9.26□□□□□ -0.93
SEMA6A-202ENST00000343348 HIGD2AQ9BW72 106 aa9.26□□□□□ -0.93
SEMA6A-202ENST00000343348 PLA2G2CQ5R387 149 aa9.25□□□□□ -0.93
SEMA6A-202ENST00000343348 WFDC10BQ8IUB3 73 aa9.25□□□□□ -0.93
SEMA6A-202ENST00000343348 Q8N7P7 452 aa9.25□□□□□ -0.93
SEMA6A-202ENST00000343348 KRTAP27-1Q3LI81 207 aa9.25□□□□□ -0.93
SEMA6A-202ENST00000343348 HIST2H2BDQ6DRA6 164 aa9.25□□□□□ -0.93
SEMA6A-202ENST00000343348 WNK1Q9H4A3 2382 aa9.25□□□□□ -0.93
SEMA6A-202ENST00000343348 PCNX3Q9H6A9 2034 aa9.25□□□□□ -0.93
SEMA6A-202ENST00000343348 LINC00643Q86TS7 51 aa9.25□□□□□ -0.93
SEMA6A-202ENST00000343348 TRBV6-1A0A0K0K1D8 114 aa9.24□□□□□ -0.93
SEMA6A-202ENST00000343348 CASC2Q6XLA1 102 aa9.24□□□□□ -0.93
SEMA6A-202ENST00000343348 KIAA1549LQ6ZVL6 1849 aa9.24□□□□□ -0.93
SEMA6A-202ENST00000343348 C19orf71A6NCJ1 209 aa9.24□□□□□ -0.93
SEMA6A-202ENST00000343348 C20orf203Q8NBC4 194 aa9.24□□□□□ -0.93
SEMA6A-202ENST00000343348 PIK3CD-AS1Q5SR53 167 aa9.23□□□□□ -0.93
SEMA6A-202ENST00000343348 DCANP1Q8TF63 244 aa9.23□□□□□ -0.93
SEMA6A-202ENST00000343348 LINC00467Q9BRT7 94 aa9.23□□□□□ -0.93
SEMA6A-202ENST00000343348 HCFC1P51610 2035 aa9.23□□□□□ -0.93
SEMA6A-202ENST00000343348 C3orf22Q8N5N4 141 aa9.22□□□□□ -0.93
SEMA6A-202ENST00000343348 CXCL5P42830 114 aa9.22□□□□□ -0.93
SEMA6A-202ENST00000343348 B9D2Q9BPU9 175 aa9.22□□□□□ -0.93
SEMA6A-202ENST00000343348 TANC1Q9C0D5 1861 aa9.22□□□□□ -0.93
SEMA6A-202ENST00000343348 ARHGAP32A7KAX9 2087 aa9.22□□□□□ -0.93
SEMA6A-202ENST00000343348 C4orf3Q8WVX3 66 aa9.22□□□□□ -0.93
SEMA6A-202ENST00000343348 LINC01548A6NM66 108 aa9.22□□□□□ -0.93
SEMA6A-202ENST00000343348 SNURFQ9Y675 71 aa9.22□□□□□ -0.93
SEMA6A-202ENST00000343348 FAM236DA0A1B0GTK5 79 aa9.21□□□□□ -0.93
SEMA6A-202ENST00000343348 FAM236CP0DP71 79 aa9.21□□□□□ -0.93
SEMA6A-202ENST00000343348 PRR14LQ5THK1 2151 aa9.21□□□□□ -0.93
SEMA6A-202ENST00000343348 Q6ZTI0 123 aa9.21□□□□□ -0.93
SEMA6A-202ENST00000343348 IGF1P05019 195 aa9.21□□□□□ -0.94
SEMA6A-202ENST00000343348 ZFAND2AQ8N6M9 145 aa9.21□□□□□ -0.94
SEMA6A-202ENST00000343348 ADORA2A-AS1P86434 159 aa9.21□□□□□ -0.94
SEMA6A-202ENST00000343348 MAP6D1Q9H9H5 199 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms