RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 NOTCH1P46531 2555 aa12.27□□□□□ -0.45
FRMD4A-202ENST00000342409 BTF3P20290 206 aaKnown RBP12.27□□□□□ -0.45
FRMD4A-202ENST00000342409 LAGE3Q14657 143 aa12.27□□□□□ -0.45
FRMD4A-202ENST00000342409 SDHAF1A6NFY7 115 aa12.25□□□□□ -0.45
FRMD4A-202ENST00000342409 G3V4G9 280 aa12.25□□□□□ -0.45
FRMD4A-202ENST00000342409 SYS1-DBNDD2H3BUS1 97 aa12.25□□□□□ -0.45
FRMD4A-202ENST00000342409 RHODO00212 210 aa12.25□□□□□ -0.45
FRMD4A-202ENST00000342409 APOC4P55056 127 aa12.25□□□□□ -0.45
FRMD4A-202ENST00000342409 DEFB135Q30KP9 77 aa12.25□□□□□ -0.45
FRMD4A-202ENST00000342409 ZFP2Q6ZN57 461 aa12.25□□□□□ -0.45
FRMD4A-202ENST00000342409 ZNF479Q96JC4 524 aa12.25□□□□□ -0.45
FRMD4A-202ENST00000342409 HSPB8Q9UJY1 196 aa12.25□□□□□ -0.45
FRMD4A-202ENST00000342409 NBEAL1Q6ZS30 2694 aa12.25□□□□□ -0.45
FRMD4A-202ENST00000342409 TRBV27A0A0K0K1C4 114 aa12.25□□□□□ -0.45
FRMD4A-202ENST00000342409 IGHV3-53P01767 116 aa12.25□□□□□ -0.45
FRMD4A-202ENST00000342409 TEX43Q6ZNM6 134 aa12.25□□□□□ -0.45
FRMD4A-202ENST00000342409 MDFIQ99750 246 aa12.25□□□□□ -0.45
FRMD4A-202ENST00000342409 DEFB104AQ8WTQ1 72 aa12.24□□□□□ -0.45
FRMD4A-202ENST00000342409 TRAV4A0A0B4J268 109 aa12.23□□□□□ -0.45
FRMD4A-202ENST00000342409 OR4C5Q8NGB2 326 aa12.23□□□□□ -0.45
FRMD4A-202ENST00000342409 GAGE12BA1L429 117 aa12.23□□□□□ -0.45
FRMD4A-202ENST00000342409 SMIM9A6NGZ8 99 aa12.23□□□□□ -0.45
FRMD4A-202ENST00000342409 VCYO14598 125 aa12.23□□□□□ -0.45
FRMD4A-202ENST00000342409 GAGE7O76087 117 aa12.23□□□□□ -0.45
FRMD4A-202ENST00000342409 GAGE12FP0CL80 117 aa12.23□□□□□ -0.45
FRMD4A-202ENST00000342409 GAGE12GP0CL81 117 aa12.23□□□□□ -0.45
FRMD4A-202ENST00000342409 GAGE12IP0CL82 117 aa12.23□□□□□ -0.45
FRMD4A-202ENST00000342409 SAMD5Q5TGI4 173 aa12.23□□□□□ -0.45
FRMD4A-202ENST00000342409 NEXN-AS1Q8NBZ9 246 aa12.23□□□□□ -0.45
FRMD4A-202ENST00000342409 H7C1H1 209 aa12.22□□□□□ -0.45
FRMD4A-202ENST00000342409 K7EMI3 77 aa12.22□□□□□ -0.45
FRMD4A-202ENST00000342409 LURAP1LQ8IV03 231 aa12.22□□□□□ -0.45
FRMD4A-202ENST00000342409 LINC00612Q8N6U2 182 aa12.22□□□□□ -0.45
FRMD4A-202ENST00000342409 MAP1LC3CQ9BXW4 147 aa12.22□□□□□ -0.45
FRMD4A-202ENST00000342409 EMP1P54849 157 aa12.21□□□□□ -0.45
FRMD4A-202ENST00000342409 ORMDL2Q53FV1 153 aa12.21□□□□□ -0.45
FRMD4A-202ENST00000342409 ZNF664Q8N3J9 261 aa12.21□□□□□ -0.45
FRMD4A-202ENST00000342409 IFI27L1Q96BM0 104 aa12.21□□□□□ -0.45
FRMD4A-202ENST00000342409 C18orf15Q96N68 181 aa12.21□□□□□ -0.45
FRMD4A-202ENST00000342409 A8MZ25 164 aa12.2□□□□□ -0.46
FRMD4A-202ENST00000342409 NUDT3O95989 172 aa12.2□□□□□ -0.46
FRMD4A-202ENST00000342409 PET117Q6UWS5 81 aa12.2□□□□□ -0.46
FRMD4A-202ENST00000342409 TSHBP01222 138 aa12.2□□□□□ -0.46
FRMD4A-202ENST00000342409 LINC01545Q5VT33 79 aa12.2□□□□□ -0.46
FRMD4A-202ENST00000342409 OR11H2Q8NH07 326 aa12.2□□□□□ -0.46
FRMD4A-202ENST00000342409 PCP4L1A6NKN8 68 aa12.19□□□□□ -0.46
FRMD4A-202ENST00000342409 ATOH7Q8N100 152 aa12.19□□□□□ -0.46
FRMD4A-202ENST00000342409 TOMM6Q96B49 74 aa12.19□□□□□ -0.46
FRMD4A-202ENST00000342409 RNF183Q96D59 192 aa12.19□□□□□ -0.46
FRMD4A-202ENST00000342409 H0Y8G0 127 aa12.18□□□□□ -0.46
FRMD4A-202ENST00000342409 RIPPLY3P57055 190 aa12.18□□□□□ -0.46
FRMD4A-202ENST00000342409 PRO1933Q9H354 126 aa12.18□□□□□ -0.46
FRMD4A-202ENST00000342409 IGHV4-28A0A0C4DH34 117 aa12.17□□□□□ -0.46
FRMD4A-202ENST00000342409 Q8NAQ8 132 aa12.17□□□□□ -0.46
FRMD4A-202ENST00000342409 PMCHL2Q9BQD1 86 aa12.17□□□□□ -0.46
FRMD4A-202ENST00000342409 TRGV2A0A075B6R0 118 aa12.17□□□□□ -0.46
FRMD4A-202ENST00000342409 I3L3M4 83 aa12.17□□□□□ -0.46
FRMD4A-202ENST00000342409 S100A12P80511 92 aa12.17□□□□□ -0.46
FRMD4A-202ENST00000342409 MAJINQ3KP22 176 aa12.17□□□□□ -0.46
FRMD4A-202ENST00000342409 C2orf66Q6UXQ4 117 aa12.17□□□□□ -0.46
FRMD4A-202ENST00000342409 SLC25A29Q8N8R3 303 aa12.17□□□□□ -0.46
FRMD4A-202ENST00000342409 KIR2DL4Q99706 377 aa12.17□□□□□ -0.46
FRMD4A-202ENST00000342409 TNFRSF18Q9Y5U5 241 aa12.17□□□□□ -0.46
FRMD4A-202ENST00000342409 TENM3Q9P273 2699 aa12.16□□□□□ -0.46
FRMD4A-202ENST00000342409 K7EQD1 137 aa12.16□□□□□ -0.46
FRMD4A-202ENST00000342409 DEFB4AO15263 64 aa12.16□□□□□ -0.46
FRMD4A-202ENST00000342409 DNAJC30Q96LL9 226 aa12.16□□□□□ -0.46
FRMD4A-202ENST00000342409 MGAM2Q2M2H8 2515 aa12.16□□□□□ -0.46
FRMD4A-202ENST00000342409 RPL39P62891 51 aaKnown RBP12.15□□□□□ -0.46
FRMD4A-202ENST00000342409 FHL2Q14192 279 aa12.15□□□□□ -0.46
FRMD4A-202ENST00000342409 ZMAT5Q9UDW3 170 aaKnown RBP12.15□□□□□ -0.46
FRMD4A-202ENST00000342409 RHOHQ15669 191 aa12.14□□□□□ -0.47
FRMD4A-202ENST00000342409 FAM222AQ5U5X8 452 aa12.14□□□□□ -0.47
FRMD4A-202ENST00000342409 LGALS9CQ6DKI2 356 aa12.14□□□□□ -0.47
FRMD4A-202ENST00000342409 ATP5LO75964 103 aa12.14□□□□□ -0.47
FRMD4A-202ENST00000342409 DEFB130BP0DP73 79 aa12.14□□□□□ -0.47
FRMD4A-202ENST00000342409 DEFB130AP0DP74 79 aa12.14□□□□□ -0.47
FRMD4A-202ENST00000342409 VAMP8Q9BV40 100 aa12.14□□□□□ -0.47
FRMD4A-202ENST00000342409 TP53TG1Q9Y2A0 90 aa12.14□□□□□ -0.47
FRMD4A-202ENST00000342409 PAM16Q9Y3D7 125 aa12.14□□□□□ -0.47
FRMD4A-202ENST00000342409 CIDEAO60543 219 aa12.13□□□□□ -0.47
FRMD4A-202ENST00000342409 MIFP14174 115 aa12.13□□□□□ -0.47
FRMD4A-202ENST00000342409 PKIAP61925 76 aa12.13□□□□□ -0.47
FRMD4A-202ENST00000342409 SCGB3A1Q96QR1 104 aa12.13□□□□□ -0.47
FRMD4A-202ENST00000342409 DKK2Q9UBU2 259 aa12.13□□□□□ -0.47
FRMD4A-202ENST00000342409 IGHV3-38A0A0C4DH36 116 aa12.12□□□□□ -0.47
FRMD4A-202ENST00000342409 TRBV10-1A0A0K0K1A3 114 aa12.12□□□□□ -0.47
FRMD4A-202ENST00000342409 C20orf202A1L168 122 aa12.12□□□□□ -0.47
FRMD4A-202ENST00000342409 IGIPA6NJ69 53 aa12.12□□□□□ -0.47
FRMD4A-202ENST00000342409 LYRM9A8MSI8 78 aa12.12□□□□□ -0.47
FRMD4A-202ENST00000342409 ODF1Q14990 250 aa12.12□□□□□ -0.47
FRMD4A-202ENST00000342409 ZNRF2Q8NHG8 242 aa12.12□□□□□ -0.47
FRMD4A-202ENST00000342409 PHLDA1Q8WV24 401 aaPredicted RBP12.12□□□□□ -0.47
FRMD4A-202ENST00000342409 RETNQ9HD89 108 aa12.12□□□□□ -0.47
FRMD4A-202ENST00000342409 CELA1Q9UNI1 258 aa12.12□□□□□ -0.47
FRMD4A-202ENST00000342409 CYSLTR1Q9Y271 337 aa12.12□□□□□ -0.47
FRMD4A-202ENST00000342409 LOC100131303A0A0U1RQF7 123 aa12.11□□□□□ -0.47
FRMD4A-202ENST00000342409 C20orf203Q8NBC4 194 aa12.11□□□□□ -0.47
FRMD4A-202ENST00000342409 ZMAT4Q9H898 229 aa12.11□□□□□ -0.47
FRMD4A-202ENST00000342409 TRBV7-3A0A075B6L6 115 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms