RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 TMEM86BQ8N661 226 aa9.55□□□□□ -0.88
SSX2IP-201ENST00000342203 CFHR3Q02985 330 aa9.55□□□□□ -0.88
SSX2IP-201ENST00000342203 IGHV7-4-1A0A0J9YVY3 117 aa9.55□□□□□ -0.88
SSX2IP-201ENST00000342203 WDFY4Q6ZS81 3184 aa9.54□□□□□ -0.88
SSX2IP-201ENST00000342203 TRACP01848 142 aa9.54□□□□□ -0.88
SSX2IP-201ENST00000342203 TRBV12-3P01733 135 aa9.54□□□□□ -0.88
SSX2IP-201ENST00000342203 IGFL3Q6UXB1 125 aa9.54□□□□□ -0.88
SSX2IP-201ENST00000342203 SLC25A29Q8N8R3 303 aa9.54□□□□□ -0.88
SSX2IP-201ENST00000342203 MRPL53Q96EL3 112 aaKnown RBP9.54□□□□□ -0.88
SSX2IP-201ENST00000342203 LAMTOR3Q9UHA4 124 aa9.54□□□□□ -0.88
SSX2IP-201ENST00000342203 NXPH4O95158 308 aa9.54□□□□□ -0.88
SSX2IP-201ENST00000342203 IGHV3-30-3P0DP02 117 aa9.54□□□□□ -0.88
SSX2IP-201ENST00000342203 RHOHQ15669 191 aa9.54□□□□□ -0.88
SSX2IP-201ENST00000342203 MDFICQ9P1T7 246 aa9.54□□□□□ -0.88
SSX2IP-201ENST00000342203 NRACQ8N912 160 aa9.53□□□□□ -0.88
SSX2IP-201ENST00000342203 NAV2Q8IVL1 2488 aa9.53□□□□□ -0.88
SSX2IP-201ENST00000342203 RHODO00212 210 aa9.53□□□□□ -0.88
SSX2IP-201ENST00000342203 CRYGBP07316 175 aa9.53□□□□□ -0.88
SSX2IP-201ENST00000342203 HOXB4P17483 251 aaPredicted RBP9.53□□□□□ -0.88
SSX2IP-201ENST00000342203 SOCS3O14543 225 aa9.53□□□□□ -0.88
SSX2IP-201ENST00000342203 TIMM17AQ99595 171 aa9.53□□□□□ -0.88
SSX2IP-201ENST00000342203 HIVEP2P31629 2446 aa9.53□□□□□ -0.88
SSX2IP-201ENST00000342203 CENPVL3A0A0U1RRI6 287 aa9.53□□□□□ -0.88
SSX2IP-201ENST00000342203 CFAP161Q6P656 301 aa9.53□□□□□ -0.88
SSX2IP-201ENST00000342203 TMEM126AQ9H061 195 aa9.53□□□□□ -0.88
SSX2IP-201ENST00000342203 LGALS9O00182 355 aa9.53□□□□□ -0.88
SSX2IP-201ENST00000342203 LY6DQ14210 128 aa9.53□□□□□ -0.88
SSX2IP-201ENST00000342203 PKD1L2Q7Z442 2459 aa9.52□□□□□ -0.88
SSX2IP-201ENST00000342203 BLCAPP62952 87 aa9.52□□□□□ -0.88
SSX2IP-201ENST00000342203 IGFL2Q6UWQ7 119 aa9.52□□□□□ -0.88
SSX2IP-201ENST00000342203 IGHV3-33P01772 117 aa9.52□□□□□ -0.89
SSX2IP-201ENST00000342203 MRPS12O15235 138 aaKnown RBP9.52□□□□□ -0.89
SSX2IP-201ENST00000342203 S100A7L2Q5SY68 101 aa9.52□□□□□ -0.89
SSX2IP-201ENST00000342203 NFE4Q86UQ8 179 aa9.52□□□□□ -0.89
SSX2IP-201ENST00000342203 FSTL3O95633 263 aa9.51□□□□□ -0.89
SSX2IP-201ENST00000342203 GATA3P23771 443 aa9.51□□□□□ -0.89
SSX2IP-201ENST00000342203 ANKRD11Q6UB99 2663 aaPredicted RBP9.51□□□□□ -0.89
SSX2IP-201ENST00000342203 A0A1B0GX51 115 aa9.51□□□□□ -0.89
SSX2IP-201ENST00000342203 TRIAP1O43715 76 aa9.51□□□□□ -0.89
SSX2IP-201ENST00000342203 HTN3P15516 51 aa9.51□□□□□ -0.89
SSX2IP-201ENST00000342203 AJUBAQ96IF1 538 aa9.51□□□□□ -0.89
SSX2IP-201ENST00000342203 A0A0J9YXY3 114 aa9.5□□□□□ -0.89
SSX2IP-201ENST00000342203 P0DMU3 169 aa9.5□□□□□ -0.89
SSX2IP-201ENST00000342203 FAM231AP0DMU4 169 aa9.5□□□□□ -0.89
SSX2IP-201ENST00000342203 FAM231CP0DMU5 169 aa9.5□□□□□ -0.89
SSX2IP-201ENST00000342203 PLA2G2CQ5R387 149 aa9.5□□□□□ -0.89
SSX2IP-201ENST00000342203 MAPK1IP1LQ8NDC0 245 aa9.5□□□□□ -0.89
SSX2IP-201ENST00000342203 CCDC140Q96MF4 163 aa9.5□□□□□ -0.89
SSX2IP-201ENST00000342203 MUC3AQ02505 3323 aa9.5□□□□□ -0.89
SSX2IP-201ENST00000342203 HAMPP81172 84 aa9.5□□□□□ -0.89
SSX2IP-201ENST00000342203 H3BT86 120 aa9.5□□□□□ -0.89
SSX2IP-201ENST00000342203 CRIP2P52943 208 aaPredicted RBP9.5□□□□□ -0.89
SSX2IP-201ENST00000342203 UCNP55089 124 aa9.5□□□□□ -0.89
SSX2IP-201ENST00000342203 IGHV1-69P01742 117 aa9.5□□□□□ -0.89
SSX2IP-201ENST00000342203 MALP21145 153 aa9.5□□□□□ -0.89
SSX2IP-201ENST00000342203 Q9HAA7 133 aa9.5□□□□□ -0.89
SSX2IP-201ENST00000342203 A8MZ25 164 aa9.5□□□□□ -0.89
SSX2IP-201ENST00000342203 C20orf203Q8NBC4 194 aa9.5□□□□□ -0.89
SSX2IP-201ENST00000342203 PTPRBP23467 1997 aa9.49□□□□□ -0.89
SSX2IP-201ENST00000342203 ZFP36P26651 326 aaKnown RBP9.49□□□□□ -0.89
SSX2IP-201ENST00000342203 PEMTQ9UBM1 199 aa9.49□□□□□ -0.89
SSX2IP-201ENST00000342203 EXPH5Q8NEV8 1989 aa9.49□□□□□ -0.89
SSX2IP-201ENST00000342203 PRB1P04280 392 aa9.49□□□□□ -0.89
SSX2IP-201ENST00000342203 PRR9Q5T870 116 aa9.49□□□□□ -0.89
SSX2IP-201ENST00000342203 SRSF2Q01130 221 aaKnown RBP9.48□□□□□ -0.89
SSX2IP-201ENST00000342203 IGHV3-30P01768 117 aa9.48□□□□□ -0.89
SSX2IP-201ENST00000342203 IGHV3-30-5P0DP03 117 aa9.48□□□□□ -0.89
SSX2IP-201ENST00000342203 RPL35AP18077 110 aaKnown RBP9.48□□□□□ -0.89
SSX2IP-201ENST00000342203 C20orf173Q96LM9 149 aa9.48□□□□□ -0.89
SSX2IP-201ENST00000342203 RPL32P62910 135 aaKnown RBP9.48□□□□□ -0.89
SSX2IP-201ENST00000342203 INSP01308 110 aa9.47□□□□□ -0.89
SSX2IP-201ENST00000342203 ZNF22P17026 224 aaPredicted RBP9.47□□□□□ -0.89
SSX2IP-201ENST00000342203 ZFAND2AQ8N6M9 145 aa9.46□□□□□ -0.89
SSX2IP-201ENST00000342203 FREM2Q5SZK8 3169 aa9.46□□□□□ -0.89
SSX2IP-201ENST00000342203 ACYP1P07311 99 aa9.46□□□□□ -0.9
SSX2IP-201ENST00000342203 DEFB130BP0DP73 79 aa9.46□□□□□ -0.9
SSX2IP-201ENST00000342203 DEFB130AP0DP74 79 aa9.46□□□□□ -0.9
SSX2IP-201ENST00000342203 HERVK_113P63121 156 aa9.46□□□□□ -0.9
SSX2IP-201ENST00000342203 A0A0B4J2C4 111 aa9.46□□□□□ -0.9
SSX2IP-201ENST00000342203 CEP192Q8TEP8 1941 aa9.46□□□□□ -0.9
SSX2IP-201ENST00000342203 IGHV1-58A0A0C4DH39 117 aa9.45□□□□□ -0.9
SSX2IP-201ENST00000342203 DNAJC30Q96LL9 226 aa9.45□□□□□ -0.9
SSX2IP-201ENST00000342203 OVOL2Q9BRP0 275 aa9.45□□□□□ -0.9
SSX2IP-201ENST00000342203 ZMAT4Q9H898 229 aa9.45□□□□□ -0.9
SSX2IP-201ENST00000342203 ZFAND3Q9H8U3 227 aa9.45□□□□□ -0.9
SSX2IP-201ENST00000342203 DEFB136Q30KP8 78 aa9.44□□□□□ -0.9
SSX2IP-201ENST00000342203 C5orf38Q86SI9 138 aa9.44□□□□□ -0.9
SSX2IP-201ENST00000342203 CDIP1Q9H305 208 aa9.44□□□□□ -0.9
SSX2IP-201ENST00000342203 TRAV13-2A0A0B4J235 113 aa9.44□□□□□ -0.9
SSX2IP-201ENST00000342203 DMDP11532 3685 aa9.44□□□□□ -0.9
SSX2IP-201ENST00000342203 CLPSL2Q6UWE3 100 aa9.44□□□□□ -0.9
SSX2IP-201ENST00000342203 ADAMTS20P59510 1910 aa9.44□□□□□ -0.9
SSX2IP-201ENST00000342203 UBE2D1P51668 147 aa9.44□□□□□ -0.9
SSX2IP-201ENST00000342203 UBL5Q9BZL1 73 aa9.44□□□□□ -0.9
SSX2IP-201ENST00000342203 U3KQE9 123 aa9.44□□□□□ -0.9
SSX2IP-201ENST00000342203 J3KT08 172 aa9.43□□□□□ -0.9
SSX2IP-201ENST00000342203 C5orf56Q8N8D9 126 aa9.43□□□□□ -0.9
SSX2IP-201ENST00000342203 SND1-IT1Q9HBX3 110 aa9.43□□□□□ -0.9
SSX2IP-201ENST00000342203 ABCA12Q86UK0 2595 aa9.43□□□□□ -0.9
SSX2IP-201ENST00000342203 CNFNQ9BYD5 112 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms