RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 MBD3L1Q8WWY6 194 aa8.49□□□□□ -1.05
NECTIN1-203ENST00000341398 SSBP4Q9BWG4 385 aaPredicted RBP8.49□□□□□ -1.05
NECTIN1-203ENST00000341398 TRBV25-1A0A075B6N4 114 aa8.48□□□□□ -1.05
NECTIN1-203ENST00000341398 RPL19P84098 196 aaKnown RBP8.48□□□□□ -1.05
NECTIN1-203ENST00000341398 TMUB2Q71RG4 321 aa8.48□□□□□ -1.05
NECTIN1-203ENST00000341398 FAM213BQ8TBF2 198 aa8.48□□□□□ -1.05
NECTIN1-203ENST00000341398 DERL1Q9BUN8 251 aa8.48□□□□□ -1.05
NECTIN1-203ENST00000341398 MLST8Q9BVC4 326 aa8.48□□□□□ -1.05
NECTIN1-203ENST00000341398 SCO2A0A1W2PP80 73 aa8.48□□□□□ -1.05
NECTIN1-203ENST00000341398 SSTP61278 116 aa8.48□□□□□ -1.05
NECTIN1-203ENST00000341398 AP1S3Q96PC3 154 aa8.48□□□□□ -1.05
NECTIN1-203ENST00000341398 VAX2Q9UIW0 290 aa8.48□□□□□ -1.05
NECTIN1-203ENST00000341398 MUC21A0A0G2JKD1 596 aa8.47□□□□□ -1.05
NECTIN1-203ENST00000341398 MUC21A0A140T8X8 626 aa8.47□□□□□ -1.05
NECTIN1-203ENST00000341398 A0A1B0GV50 99 aa8.47□□□□□ -1.05
NECTIN1-203ENST00000341398 H7C1H1 209 aa8.47□□□□□ -1.05
NECTIN1-203ENST00000341398 H2AFB1P0C5Y9 115 aa8.47□□□□□ -1.05
NECTIN1-203ENST00000341398 RPL37AP61513 92 aaKnown RBP8.47□□□□□ -1.05
NECTIN1-203ENST00000341398 EIF5AP63241 154 aaKnown RBP8.47□□□□□ -1.05
NECTIN1-203ENST00000341398 ZNF345Q14585 488 aa8.47□□□□□ -1.05
NECTIN1-203ENST00000341398 KCNRGQ8N5I3 272 aa8.47□□□□□ -1.05
NECTIN1-203ENST00000341398 CLRN3Q8NCR9 226 aa8.47□□□□□ -1.05
NECTIN1-203ENST00000341398 DAZAP1Q96EP5 407 aaKnown RBP8.47□□□□□ -1.05
NECTIN1-203ENST00000341398 IGHV1-24A0A0C4DH33 117 aa8.46□□□□□ -1.06
NECTIN1-203ENST00000341398 A0A0D9SG52 128 aa8.46□□□□□ -1.06
NECTIN1-203ENST00000341398 KANTRA0A1W2PQU2 76 aa8.46□□□□□ -1.06
NECTIN1-203ENST00000341398 G3V3Q6 166 aa8.46□□□□□ -1.06
NECTIN1-203ENST00000341398 PRSS1P07477 247 aa8.46□□□□□ -1.06
NECTIN1-203ENST00000341398 KRTAP10-4P60372 401 aaPredicted RBP8.46□□□□□ -1.06
NECTIN1-203ENST00000341398 RBX1P62877 108 aa8.46□□□□□ -1.06
NECTIN1-203ENST00000341398 GAGE6Q13070 117 aa8.46□□□□□ -1.06
NECTIN1-203ENST00000341398 RGS21Q2M5E4 152 aa8.46□□□□□ -1.06
NECTIN1-203ENST00000341398 LINC00269Q8N2A0 174 aa8.46□□□□□ -1.06
NECTIN1-203ENST00000341398 C9orf163Q8N9P6 203 aa8.46□□□□□ -1.06
NECTIN1-203ENST00000341398 PRR34Q9NV39 138 aa8.46□□□□□ -1.06
NECTIN1-203ENST00000341398 HMCN2Q8NDA2 5059 aa8.45□□□□□ -1.06
NECTIN1-203ENST00000341398 RPS20P60866 119 aaKnown RBP8.45□□□□□ -1.06
NECTIN1-203ENST00000341398 NTM-AS1Q6ZSK4 140 aa8.45□□□□□ -1.06
NECTIN1-203ENST00000341398 TRAV8-4A0A0B4J246 113 aa8.44□□□□□ -1.06
NECTIN1-203ENST00000341398 XKRY2A2RUG3 117 aa8.44□□□□□ -1.06
NECTIN1-203ENST00000341398 HMSDA8MTL9 139 aa8.44□□□□□ -1.06
NECTIN1-203ENST00000341398 P01737 135 aa8.44□□□□□ -1.06
NECTIN1-203ENST00000341398 RPL35P42766 123 aaKnown RBP8.44□□□□□ -1.06
NECTIN1-203ENST00000341398 IQCJQ1A5X6 159 aa8.44□□□□□ -1.06
NECTIN1-203ENST00000341398 CLPSL2Q6UWE3 100 aa8.44□□□□□ -1.06
NECTIN1-203ENST00000341398 MANBALQ9NQG1 85 aa8.44□□□□□ -1.06
NECTIN1-203ENST00000341398 KIF25-AS1Q9Y6Z4 181 aa8.44□□□□□ -1.06
NECTIN1-203ENST00000341398 TEX46H3BTG2 121 aa8.43□□□□□ -1.06
NECTIN1-203ENST00000341398 MGPP08493 103 aa8.43□□□□□ -1.06
NECTIN1-203ENST00000341398 CACNG7P62955 275 aa8.43□□□□□ -1.06
NECTIN1-203ENST00000341398 REG3AQ06141 175 aa8.43□□□□□ -1.06
NECTIN1-203ENST00000341398 FER1L6-AS1Q8NA97 138 aa8.43□□□□□ -1.06
NECTIN1-203ENST00000341398 DPH3Q96FX2 82 aa8.43□□□□□ -1.06
NECTIN1-203ENST00000341398 TPPP3Q9BW30 176 aa8.43□□□□□ -1.06
NECTIN1-203ENST00000341398 AP5S1Q9NUS5 200 aa8.43□□□□□ -1.06
NECTIN1-203ENST00000341398 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.42□□□□□ -1.06
NECTIN1-203ENST00000341398 F2Z2F3 143 aa8.42□□□□□ -1.06
NECTIN1-203ENST00000341398 SMLR1H3BR10 107 aa8.42□□□□□ -1.06
NECTIN1-203ENST00000341398 GZMBP10144 247 aa8.42□□□□□ -1.06
NECTIN1-203ENST00000341398 A0A1B0GUV1 79 aa8.41□□□□□ -1.06
NECTIN1-203ENST00000341398 M0QY20 66 aa8.41□□□□□ -1.06
NECTIN1-203ENST00000341398 BCL2L11O43521 198 aa8.41□□□□□ -1.06
NECTIN1-203ENST00000341398 TRGC1P0CF51 173 aa8.41□□□□□ -1.06
NECTIN1-203ENST00000341398 OR2D3Q8NGH3 330 aa8.41□□□□□ -1.06
NECTIN1-203ENST00000341398 TMEM243Q9BU79 118 aa8.41□□□□□ -1.06
NECTIN1-203ENST00000341398 BIN3Q9NQY0 253 aa8.41□□□□□ -1.06
NECTIN1-203ENST00000341398 GNG13Q9P2W3 67 aa8.41□□□□□ -1.06
NECTIN1-203ENST00000341398 PLA2G2DQ9UNK4 145 aa8.41□□□□□ -1.06
NECTIN1-203ENST00000341398 LRP1Q07954 4544 aaKnown RBP8.4□□□□□ -1.06
NECTIN1-203ENST00000341398 IGLV10-54A0A075B6I4 117 aa8.4□□□□□ -1.06
NECTIN1-203ENST00000341398 hDV102S1A0JD36 115 aa8.4□□□□□ -1.06
NECTIN1-203ENST00000341398 UBE2L6O14933 153 aa8.4□□□□□ -1.06
NECTIN1-203ENST00000341398 KRTAP26-1Q6PEX3 210 aa8.4□□□□□ -1.06
NECTIN1-203ENST00000341398 RASL11AQ6T310 242 aa8.4□□□□□ -1.06
NECTIN1-203ENST00000341398 SDIM1Q6ZPB5 146 aa8.4□□□□□ -1.06
NECTIN1-203ENST00000341398 SMIM12Q96EX1 92 aa8.4□□□□□ -1.06
NECTIN1-203ENST00000341398 IGLC6P0CF74 106 aa8.39□□□□□ -1.07
NECTIN1-203ENST00000341398 GNG4P50150 75 aa8.39□□□□□ -1.07
NECTIN1-203ENST00000341398 RAB5CP51148 216 aa8.39□□□□□ -1.07
NECTIN1-203ENST00000341398 NKX2-5P52952 324 aaPredicted RBP8.39□□□□□ -1.07
NECTIN1-203ENST00000341398 CNBPP62633 177 aaKnown RBP8.39□□□□□ -1.07
NECTIN1-203ENST00000341398 CENPWQ5EE01 88 aa8.39□□□□□ -1.07
NECTIN1-203ENST00000341398 SUMO4Q6EEV6 95 aa8.39□□□□□ -1.07
NECTIN1-203ENST00000341398 EIF5AL1Q6IS14 154 aaKnown RBP8.39□□□□□ -1.07
NECTIN1-203ENST00000341398 WDR73Q6P4I2 378 aa8.39□□□□□ -1.07
NECTIN1-203ENST00000341398 C11orf52Q96A22 123 aa8.39□□□□□ -1.07
NECTIN1-203ENST00000341398 NIT2Q9NQR4 276 aa8.39□□□□□ -1.07
NECTIN1-203ENST00000341398 FAT3Q8TDW7 4589 aa8.39□□□□□ -1.07
NECTIN1-203ENST00000341398 PKHD1L1Q86WI1 4243 aa8.39□□□□□ -1.07
NECTIN1-203ENST00000341398 IGHV3-64A0A075B6Q5 118 aa8.38□□□□□ -1.07
NECTIN1-203ENST00000341398 IFNA1P01562 189 aa8.38□□□□□ -1.07
NECTIN1-203ENST00000341398 CCL20P78556 96 aa8.38□□□□□ -1.07
NECTIN1-203ENST00000341398 RNF185Q96GF1 192 aa8.38□□□□□ -1.07
NECTIN1-203ENST00000341398 PGLYRP4Q96LB8 373 aa8.38□□□□□ -1.07
NECTIN1-203ENST00000341398 DPH3P1Q9H4G8 78 aa8.38□□□□□ -1.07
NECTIN1-203ENST00000341398 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.38□□□□□ -1.07
NECTIN1-203ENST00000341398 TRAV1-1A0A0B4J248 108 aa8.37□□□□□ -1.07
NECTIN1-203ENST00000341398 PDE6DO43924 150 aa8.37□□□□□ -1.07
NECTIN1-203ENST00000341398 COTL1Q14019 142 aa8.37□□□□□ -1.07
NECTIN1-203ENST00000341398 CFAP161Q6P656 301 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms