RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 ATP5LO75964 103 aa7.47□□□□□ -1.21
RBFOX1-202ENST00000340209 TMEM170BQ5T4T1 132 aa7.47□□□□□ -1.21
RBFOX1-202ENST00000340209 AMTNQ6UX39 209 aa7.47□□□□□ -1.21
RBFOX1-202ENST00000340209 TMEM86BQ8N661 226 aa7.47□□□□□ -1.21
RBFOX1-202ENST00000340209 RNASE1P07998 156 aaKnown RBP7.47□□□□□ -1.21
RBFOX1-202ENST00000340209 ORMDL2Q53FV1 153 aa7.47□□□□□ -1.21
RBFOX1-202ENST00000340209 Q8N2B8 174 aa7.47□□□□□ -1.21
RBFOX1-202ENST00000340209 SPAG8Q99932 426 aaPredicted RBP7.47□□□□□ -1.21
RBFOX1-202ENST00000340209 CHTOPQ9Y3Y2 248 aaKnown RBP7.47□□□□□ -1.21
RBFOX1-202ENST00000340209 TNFRSF18Q9Y5U5 241 aa7.47□□□□□ -1.21
RBFOX1-202ENST00000340209 IGKV3OR2-268A0A0C4DH90 116 aa7.47□□□□□ -1.21
RBFOX1-202ENST00000340209 CRXO43186 299 aaPredicted RBP7.47□□□□□ -1.21
RBFOX1-202ENST00000340209 ODF1Q14990 250 aa7.47□□□□□ -1.21
RBFOX1-202ENST00000340209 DEFB125Q8N687 156 aa7.47□□□□□ -1.21
RBFOX1-202ENST00000340209 CYSLTR1Q9Y271 337 aa7.47□□□□□ -1.21
RBFOX1-202ENST00000340209 PTTG1IPP53801 180 aa7.47□□□□□ -1.21
RBFOX1-202ENST00000340209 HILS1P60008 231 aa7.47□□□□□ -1.21
RBFOX1-202ENST00000340209 BAHCC1Q9P281 2608 aa7.46□□□□□ -1.21
RBFOX1-202ENST00000340209 ZNF415Q09FC8 603 aa7.46□□□□□ -1.21
RBFOX1-202ENST00000340209 LGALS9BQ3B8N2 356 aa7.46□□□□□ -1.21
RBFOX1-202ENST00000340209 LGALS9CQ6DKI2 356 aa7.46□□□□□ -1.21
RBFOX1-202ENST00000340209 SCRT2Q9NQ03 307 aa7.46□□□□□ -1.21
RBFOX1-202ENST00000340209 TRGV2A0A075B6R0 118 aa7.46□□□□□ -1.22
RBFOX1-202ENST00000340209 K7EP13 123 aa7.46□□□□□ -1.22
RBFOX1-202ENST00000340209 DEFB4AO15263 64 aa7.46□□□□□ -1.22
RBFOX1-202ENST00000340209 NOP10Q9NPE3 64 aaKnown RBP7.46□□□□□ -1.22
RBFOX1-202ENST00000340209 GAGE12BA1L429 117 aa7.46□□□□□ -1.22
RBFOX1-202ENST00000340209 GAGE7O76087 117 aa7.46□□□□□ -1.22
RBFOX1-202ENST00000340209 GAGE12FP0CL80 117 aa7.46□□□□□ -1.22
RBFOX1-202ENST00000340209 GAGE12GP0CL81 117 aa7.46□□□□□ -1.22
RBFOX1-202ENST00000340209 GAGE12IP0CL82 117 aa7.46□□□□□ -1.22
RBFOX1-202ENST00000340209 LINC00482Q8N8I6 264 aa7.45□□□□□ -1.22
RBFOX1-202ENST00000340209 RNF152Q8N8N0 203 aa7.45□□□□□ -1.22
RBFOX1-202ENST00000340209 ANK3Q12955 4377 aaKnown RBP7.45□□□□□ -1.22
RBFOX1-202ENST00000340209 IGLV2-18A0A075B6J9 118 aa7.45□□□□□ -1.22
RBFOX1-202ENST00000340209 PRSS29PA6NIE9 313 aa7.45□□□□□ -1.22
RBFOX1-202ENST00000340209 DEFB130BP0DP73 79 aa7.45□□□□□ -1.22
RBFOX1-202ENST00000340209 DEFB130AP0DP74 79 aa7.45□□□□□ -1.22
RBFOX1-202ENST00000340209 SCGB1D4Q6XE38 83 aa7.45□□□□□ -1.22
RBFOX1-202ENST00000340209 ZFP2Q6ZN57 461 aa7.45□□□□□ -1.22
RBFOX1-202ENST00000340209 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.44□□□□□ -1.22
RBFOX1-202ENST00000340209 IGKV2-29A2NJV5 120 aaPredicted RBP7.44□□□□□ -1.22
RBFOX1-202ENST00000340209 VCYO14598 125 aa7.44□□□□□ -1.22
RBFOX1-202ENST00000340209 CRYGDP07320 174 aa7.44□□□□□ -1.22
RBFOX1-202ENST00000340209 TMEM97Q5BJF2 176 aa7.44□□□□□ -1.22
RBFOX1-202ENST00000340209 SPATA3Q8NHX4 192 aa7.44□□□□□ -1.22
RBFOX1-202ENST00000340209 SFTA2Q6UW10 78 aa7.44□□□□□ -1.22
RBFOX1-202ENST00000340209 Q6ZTI0 123 aa7.44□□□□□ -1.22
RBFOX1-202ENST00000340209 OR4C5Q8NGB2 326 aa7.44□□□□□ -1.22
RBFOX1-202ENST00000340209 IGHV4-4A0A075B6R2 117 aa7.44□□□□□ -1.22
RBFOX1-202ENST00000340209 COX8AP10176 69 aa7.44□□□□□ -1.22
RBFOX1-202ENST00000340209 TRRAPQ9Y4A5 3859 aa7.44□□□□□ -1.22
RBFOX1-202ENST00000340209 NBEAL1Q6ZS30 2694 aa7.43□□□□□ -1.22
RBFOX1-202ENST00000340209 RRN3P1Q2M238 152 aa7.43□□□□□ -1.22
RBFOX1-202ENST00000340209 Q6ZSN1 163 aa7.43□□□□□ -1.22
RBFOX1-202ENST00000340209 NPSP0C0P6 89 aa7.43□□□□□ -1.22
RBFOX1-202ENST00000340209 C9orf85Q96MD7 179 aa7.43□□□□□ -1.22
RBFOX1-202ENST00000340209 BAALCQ8WXS3 180 aa7.43□□□□□ -1.22
RBFOX1-202ENST00000340209 C20orf78Q9BR46 151 aa7.43□□□□□ -1.22
RBFOX1-202ENST00000340209 GAGE12JA6NER3 117 aa7.42□□□□□ -1.22
RBFOX1-202ENST00000340209 M0R2P5 195 aa7.42□□□□□ -1.22
RBFOX1-202ENST00000340209 LINC00315P59091 139 aa7.42□□□□□ -1.22
RBFOX1-202ENST00000340209 GAGE1Q13065 139 aa7.42□□□□□ -1.22
RBFOX1-202ENST00000340209 GAGE4Q13068 117 aa7.42□□□□□ -1.22
RBFOX1-202ENST00000340209 GAGE5Q13069 117 aa7.42□□□□□ -1.22
RBFOX1-202ENST00000340209 GAGE13Q4V321 117 aa7.42□□□□□ -1.22
RBFOX1-202ENST00000340209 DGAT2L7PQ6IED9 249 aa7.42□□□□□ -1.22
RBFOX1-202ENST00000340209 OR11H2Q8NH07 326 aa7.42□□□□□ -1.22
RBFOX1-202ENST00000340209 M0QY20 66 aa7.42□□□□□ -1.22
RBFOX1-202ENST00000340209 ZNRF2Q8NHG8 242 aa7.42□□□□□ -1.22
RBFOX1-202ENST00000340209 A0A096LPF7 62 aa7.42□□□□□ -1.22
RBFOX1-202ENST00000340209 TRBV7-9A0A0J9YWB2 115 aa7.42□□□□□ -1.22
RBFOX1-202ENST00000340209 K7ERJ3 54 aa7.42□□□□□ -1.22
RBFOX1-202ENST00000340209 KRTAP10-3P60369 221 aa7.42□□□□□ -1.22
RBFOX1-202ENST00000340209 TRPT1Q86TN4 253 aaKnown RBP7.42□□□□□ -1.22
RBFOX1-202ENST00000340209 KIF25-AS1Q9Y6Z4 181 aa7.42□□□□□ -1.22
RBFOX1-202ENST00000340209 H7C1H1 209 aa7.42□□□□□ -1.22
RBFOX1-202ENST00000340209 ZNF479Q96JC4 524 aa7.42□□□□□ -1.22
RBFOX1-202ENST00000340209 A0A087WX48 190 aa7.41□□□□□ -1.22
RBFOX1-202ENST00000340209 ADARB2-AS1A8MUL3 147 aa7.41□□□□□ -1.22
RBFOX1-202ENST00000340209 PPP1R17O96001 155 aa7.41□□□□□ -1.22
RBFOX1-202ENST00000340209 LBHQ53QV2 105 aaPredicted RBP7.41□□□□□ -1.22
RBFOX1-202ENST00000340209 BVES-AS1Q5T3Y7 98 aa7.41□□□□□ -1.22
RBFOX1-202ENST00000340209 HIST1H4GQ99525 98 aa7.41□□□□□ -1.22
RBFOX1-202ENST00000340209 MRPS16Q9Y3D3 137 aaKnown RBP7.41□□□□□ -1.22
RBFOX1-202ENST00000340209 F8VRH5 84 aa7.41□□□□□ -1.22
RBFOX1-202ENST00000340209 MED14OSP0DP75 135 aa7.41□□□□□ -1.22
RBFOX1-202ENST00000340209 HTN3P15516 51 aa7.41□□□□□ -1.22
RBFOX1-202ENST00000340209 C12orf54Q6X4T0 127 aa7.41□□□□□ -1.22
RBFOX1-202ENST00000340209 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.41□□□□□ -1.22
RBFOX1-202ENST00000340209 MORN3Q6PF18 240 aaPredicted RBP7.4□□□□□ -1.22
RBFOX1-202ENST00000340209 TOMM6Q96B49 74 aa7.4□□□□□ -1.22
RBFOX1-202ENST00000340209 C1orf158Q8N1D5 194 aa7.4□□□□□ -1.22
RBFOX1-202ENST00000340209 ODF3Q96PU9 254 aa7.4□□□□□ -1.22
RBFOX1-202ENST00000340209 NHP2Q9NX24 153 aaKnown RBP7.4□□□□□ -1.22
RBFOX1-202ENST00000340209 C2orf91Q6ZV80 131 aa7.4□□□□□ -1.23
RBFOX1-202ENST00000340209 MAPKAPK5-AS1Q8N8E1 139 aa7.4□□□□□ -1.23
RBFOX1-202ENST00000340209 C11orf86A6NJI1 115 aa7.39□□□□□ -1.23
RBFOX1-202ENST00000340209 ZNF815PA8K554 130 aa7.39□□□□□ -1.23
RBFOX1-202ENST00000340209 PRADC1Q9BSG0 188 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms