RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 PRR20DP86480 221 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 PRR20BP86481 221 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 PRR20AP86496 221 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 IGFL2Q6UWQ7 119 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 MDFICQ9P1T7 246 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 IGLV3-9A0A075B6K5 115 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 IGHV3-66A0A0C4DH42 116 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 ETDCA0A1B0GVM5 59 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 G3V4G9 280 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 RPS27P42677 84 aaKnown RBP2.57□□□□□ -2
CSMD3-202ENST00000339701 ZNF833PQ6ZTB9 187 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 LIMD2Q9BT23 127 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 TRAV10A0A0B4J240 114 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 IGKV1D-16P01601 117 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 TP53TG1Q9Y2A0 90 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 RS1O15537 224 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 NDUFS5O43920 106 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 LYZL1Q6UWQ5 148 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 ESM1Q9NQ30 184 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 IGHV4-59P01825 116 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 DIRC1Q969H9 104 aa2.57□□□□□ -2
CSMD3-202ENST00000339701 FGF23Q9GZV9 251 aaPredicted RBP2.57□□□□□ -2
CSMD3-202ENST00000339701 IGHV3-49A0A0A0MS15 119 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 LY6HO94772 140 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 NXPH4O95158 308 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 RNASE2P10153 161 aaKnown RBP2.56□□□□□ -2
CSMD3-202ENST00000339701 MIAQ16674 131 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 TMEM200BQ69YZ2 307 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 LINC01561Q8N1V8 128 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 FAM19A2Q8N3H0 131 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 LINC00467Q9BRT7 94 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 IGHV3-35A0A0C4DH35 117 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 LOC107984640A0A0U1RRK4 108 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 Q6ZRM9 215 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 ZNF664Q8N3J9 261 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 RHPN1-AS1Q9BWJ2 59 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 CTSGP08311 255 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 CXCL6P80162 114 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 MIR17HGQ75NE6 70 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 FAM216BQ8N7L0 139 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 TP53AIP1Q9HCN2 124 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 C17orf98A8MV24 154 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 PLA2G1BP04054 148 aaKnown RBP2.56□□□□□ -2
CSMD3-202ENST00000339701 CD24P25063 80 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 DEFB131AP59861 70 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 LSM4Q9Y4Z0 139 aaKnown RBP2.56□□□□□ -2
CSMD3-202ENST00000339701 TRBV30A0A0K0K1B3 111 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 H3BRN7 92 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 TIRAPP58753 221 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 Q6JHZ5 121 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 LINC00527Q9UJ94 153 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 BAALC-AS2P0C853 105 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 C12orf74Q32Q52 190 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 MRPL51Q4U2R6 128 aaKnown RBP2.56□□□□□ -2
CSMD3-202ENST00000339701 V9GYV3 84 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 IGF2RP11717 2491 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 IGHV4-61A0A0C4DH41 118 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 FAM236DA0A1B0GTK5 79 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 FAM236CP0DP71 79 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 LOXP28300 417 aaPredicted RBP2.56□□□□□ -2
CSMD3-202ENST00000339701 TMEM263Q8WUH6 116 aaKnown RBP2.56□□□□□ -2
CSMD3-202ENST00000339701 LY6G6EA0A0G2JKS1 128 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 LRCOL1A6NCL2 159 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 CCDC179H3BU77 68 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 U3KQA8 63 aa2.56□□□□□ -2
CSMD3-202ENST00000339701 IGKV1OR2-108A0A075B7D4 117 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 SPINK9Q5DT21 86 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 LINC00337Q8N6G1 96 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 DEFB131BA0A096LNP1 70 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 Q8N9L7 120 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 SND1-IT1Q9HBX3 110 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 SCRT2Q9NQ03 307 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 STAB1Q9NY15 2570 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 USP24Q9UPU5 2620 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 TINCRA0A1B0GVN0 87 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 hDV103S1A0JD37 113 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 IGLC7A0M8Q6 106 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 ANGP03950 147 aaKnown RBP2.55□□□□□ -2
CSMD3-202ENST00000339701 IGLL1P15814 213 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 NDUFV3P56181 108 aaKnown RBP2.55□□□□□ -2
CSMD3-202ENST00000339701 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.55□□□□□ -2
CSMD3-202ENST00000339701 LYPD6Q86Y78 171 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 CNFNQ9BYD5 112 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 XCL2Q9UBD3 114 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 TRAV12-2A0A075B6T6 113 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 BPY2O14599 106 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 QRFPP83859 136 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 TMEM61Q8N0U2 210 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 B9D2Q9BPU9 175 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 FAM236AA0A1B0GUQ0 79 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 FAM236BA0A1B0GV22 79 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 C10orf142B7Z368 130 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 BLCAPP62952 87 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 POLR3KQ9Y2Y1 108 aaPredicted RBP2.55□□□□□ -2
CSMD3-202ENST00000339701 PTH2Q96A98 100 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 XAGE1AQ9HD64 81 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 C1orf134Q5TEV5 83 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 PSMG3-AS1Q96PY0 264 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 CYTL1Q9NRR1 136 aa2.55□□□□□ -2
CSMD3-202ENST00000339701 TRBV27A0A0K0K1C4 114 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms