RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 KCNIP4Q6PIL6 250 aa10.2□□□□□ -0.78
LINC01116-202ENST00000339037 ZNF471Q9BX82 626 aaPredicted RBP10.2□□□□□ -0.78
LINC01116-202ENST00000339037 UMAD1C9J7I0 102 aa10.19□□□□□ -0.78
LINC01116-202ENST00000339037 RPL19P84098 196 aaKnown RBP10.19□□□□□ -0.78
LINC01116-202ENST00000339037 ATRAIDQ6UW56 229 aa10.19□□□□□ -0.78
LINC01116-202ENST00000339037 A0A0D9SG52 128 aa10.18□□□□□ -0.78
LINC01116-202ENST00000339037 KANTRA0A1W2PQU2 76 aa10.18□□□□□ -0.78
LINC01116-202ENST00000339037 IGLV2-8P01709 118 aa10.18□□□□□ -0.78
LINC01116-202ENST00000339037 C14orf177Q52M58 125 aa10.18□□□□□ -0.78
LINC01116-202ENST00000339037 ZFP82Q8N141 532 aa10.18□□□□□ -0.78
LINC01116-202ENST00000339037 TRBV10-1A0A0K0K1A3 114 aa10.17□□□□□ -0.78
LINC01116-202ENST00000339037 Q0VG73 95 aa10.17□□□□□ -0.78
LINC01116-202ENST00000339037 MLST8Q9BVC4 326 aa10.17□□□□□ -0.78
LINC01116-202ENST00000339037 C1orf43Q9BWL3 253 aa10.17□□□□□ -0.78
LINC01116-202ENST00000339037 PFDN1O60925 122 aa10.16□□□□□ -0.78
LINC01116-202ENST00000339037 RPL36AP83881 106 aaKnown RBP10.16□□□□□ -0.78
LINC01116-202ENST00000339037 OR10AG1Q8NH19 301 aa10.16□□□□□ -0.78
LINC01116-202ENST00000339037 RPL36ALQ969Q0 106 aaKnown RBP10.16□□□□□ -0.78
LINC01116-202ENST00000339037 TRBV7-3A0A075B6L6 115 aa10.15□□□□□ -0.78
LINC01116-202ENST00000339037 CRPP02741 224 aa10.15□□□□□ -0.78
LINC01116-202ENST00000339037 S100A9P06702 114 aaKnown RBP10.15□□□□□ -0.78
LINC01116-202ENST00000339037 TMEM262E9PQX1 116 aa10.14□□□□□ -0.79
LINC01116-202ENST00000339037 UBE2D3P61077 147 aa10.14□□□□□ -0.79
LINC01116-202ENST00000339037 UBE2D2P62837 147 aa10.14□□□□□ -0.79
LINC01116-202ENST00000339037 PRR27Q6MZM9 219 aa10.14□□□□□ -0.79
LINC01116-202ENST00000339037 TMUB2Q71RG4 321 aa10.14□□□□□ -0.79
LINC01116-202ENST00000339037 BAGE2Q86Y30 109 aa10.14□□□□□ -0.79
LINC01116-202ENST00000339037 MUC21A0A0G2JKD1 596 aa10.13□□□□□ -0.79
LINC01116-202ENST00000339037 MUC21A0A140T8X8 626 aa10.13□□□□□ -0.79
LINC01116-202ENST00000339037 CXCL1P09341 107 aa10.13□□□□□ -0.79
LINC01116-202ENST00000339037 RPL37AP61513 92 aaKnown RBP10.13□□□□□ -0.79
LINC01116-202ENST00000339037 CT83Q5H943 113 aa10.13□□□□□ -0.79
LINC01116-202ENST00000339037 C15orf54Q8N8G6 183 aa10.13□□□□□ -0.79
LINC01116-202ENST00000339037 DERL1Q9BUN8 251 aa10.13□□□□□ -0.79
LINC01116-202ENST00000339037 TRBV6-8A0A0A6YYG3 113 aa10.12□□□□□ -0.79
LINC01116-202ENST00000339037 SNAI2O43623 268 aa10.12□□□□□ -0.79
LINC01116-202ENST00000339037 RPL35P42766 123 aaKnown RBP10.12□□□□□ -0.79
LINC01116-202ENST00000339037 EIF5AP63241 154 aaKnown RBP10.12□□□□□ -0.79
LINC01116-202ENST00000339037 CCL20P78556 96 aa10.12□□□□□ -0.79
LINC01116-202ENST00000339037 ZNF56Q15929 161 aa10.12□□□□□ -0.79
LINC01116-202ENST00000339037 ENHOQ6UWT2 76 aa10.12□□□□□ -0.79
LINC01116-202ENST00000339037 OR10G8Q8NGN5 311 aa10.12□□□□□ -0.79
LINC01116-202ENST00000339037 USP17L23D6RBM5 183 aa10.11□□□□□ -0.79
LINC01116-202ENST00000339037 HLA-DQA1P01909 254 aa10.11□□□□□ -0.79
LINC01116-202ENST00000339037 ANGP03950 147 aaKnown RBP10.11□□□□□ -0.79
LINC01116-202ENST00000339037 RAB4BP61018 213 aa10.11□□□□□ -0.79
LINC01116-202ENST00000339037 MPV17L2Q567V2 206 aa10.11□□□□□ -0.79
LINC01116-202ENST00000339037 NEXN-AS1Q8NBZ9 246 aa10.11□□□□□ -0.79
LINC01116-202ENST00000339037 GNG13Q9P2W3 67 aa10.11□□□□□ -0.79
LINC01116-202ENST00000339037 OR5AL1P0C617 328 aa10.1□□□□□ -0.79
LINC01116-202ENST00000339037 SSTP61278 116 aa10.1□□□□□ -0.79
LINC01116-202ENST00000339037 C11orf52Q96A22 123 aa10.1□□□□□ -0.79
LINC01116-202ENST00000339037 MANBALQ9NQG1 85 aa10.1□□□□□ -0.79
LINC01116-202ENST00000339037 PKIAP61925 76 aa10.09□□□□□ -0.79
LINC01116-202ENST00000339037 ODF1Q14990 250 aa10.09□□□□□ -0.79
LINC01116-202ENST00000339037 MIAQ16674 131 aa10.09□□□□□ -0.79
LINC01116-202ENST00000339037 SPANXN1Q5VSR9 72 aa10.09□□□□□ -0.79
LINC01116-202ENST00000339037 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.09□□□□□ -0.79
LINC01116-202ENST00000339037 CHCHD5Q9BSY4 110 aa10.09□□□□□ -0.79
LINC01116-202ENST00000339037 TRAV1-1A0A0B4J248 108 aa10.08□□□□□ -0.8
LINC01116-202ENST00000339037 PRSS1P07477 247 aa10.08□□□□□ -0.8
LINC01116-202ENST00000339037 HNRNPA3P51991 378 aaKnown RBP10.08□□□□□ -0.8
LINC01116-202ENST00000339037 CENPWQ5EE01 88 aa10.08□□□□□ -0.8
LINC01116-202ENST00000339037 KIF25-AS1Q9Y6Z4 181 aa10.08□□□□□ -0.8
LINC01116-202ENST00000339037 GZMBP10144 247 aa10.07□□□□□ -0.8
LINC01116-202ENST00000339037 DGAT2L7PQ6IED9 249 aa10.07□□□□□ -0.8
LINC01116-202ENST00000339037 DAZAP1Q96EP5 407 aaKnown RBP10.07□□□□□ -0.8
LINC01116-202ENST00000339037 F5H697 171 aa10.06□□□□□ -0.8
LINC01116-202ENST00000339037 RAB5CP51148 216 aa10.06□□□□□ -0.8
LINC01116-202ENST00000339037 C9orf163Q8N9P6 203 aa10.06□□□□□ -0.8
LINC01116-202ENST00000339037 RAB19A4D1S5 217 aa10.05□□□□□ -0.8
LINC01116-202ENST00000339037 IGLC6P0CF74 106 aa10.05□□□□□ -0.8
LINC01116-202ENST00000339037 SULT1A2P50226 295 aa10.05□□□□□ -0.8
LINC01116-202ENST00000339037 CLPSL2Q6UWE3 100 aa10.05□□□□□ -0.8
LINC01116-202ENST00000339037 AP1S3Q96PC3 154 aa10.05□□□□□ -0.8
LINC01116-202ENST00000339037 PRR34Q9NV39 138 aa10.05□□□□□ -0.8
LINC01116-202ENST00000339037 TRBV20OR9-2A0A075B6H5 130 aa10.04□□□□□ -0.8
LINC01116-202ENST00000339037 C19orf71A6NCJ1 209 aa10.04□□□□□ -0.8
LINC01116-202ENST00000339037 MEF2BQ02080 365 aaPredicted RBP10.04□□□□□ -0.8
LINC01116-202ENST00000339037 TMEM97Q5BJF2 176 aa10.04□□□□□ -0.8
LINC01116-202ENST00000339037 EIF5AL1Q6IS14 154 aaKnown RBP10.04□□□□□ -0.8
LINC01116-202ENST00000339037 NTM-AS1Q6ZSK4 140 aa10.04□□□□□ -0.8
LINC01116-202ENST00000339037 LINC00269Q8N2A0 174 aa10.04□□□□□ -0.8
LINC01116-202ENST00000339037 TPPP3Q9BW30 176 aa10.04□□□□□ -0.8
LINC01116-202ENST00000339037 VAX2Q9UIW0 290 aa10.04□□□□□ -0.8
LINC01116-202ENST00000339037 RNF213Q63HN8 5207 aa10.04□□□□□ -0.8
LINC01116-202ENST00000339037 SMIM17P0DL12 118 aa10.03□□□□□ -0.8
LINC01116-202ENST00000339037 GNG4P50150 75 aa10.03□□□□□ -0.8
LINC01116-202ENST00000339037 RBX1P62877 108 aa10.03□□□□□ -0.8
LINC01116-202ENST00000339037 TCTE3Q8IZS6 198 aa10.03□□□□□ -0.8
LINC01116-202ENST00000339037 FER1L6-AS1Q8NA97 138 aa10.03□□□□□ -0.8
LINC01116-202ENST00000339037 OR2D3Q8NGH3 330 aa10.03□□□□□ -0.8
LINC01116-202ENST00000339037 TEX46H3BTG2 121 aa10.02□□□□□ -0.81
LINC01116-202ENST00000339037 PANO1I0J062 215 aa10.02□□□□□ -0.81
LINC01116-202ENST00000339037 MGPP08493 103 aa10.02□□□□□ -0.81
LINC01116-202ENST00000339037 SDIM1Q6ZPB5 146 aa10.02□□□□□ -0.81
LINC01116-202ENST00000339037 LRP2P98164 4655 aa10.01□□□□□ -0.81
LINC01116-202ENST00000339037 TRBV25-1A0A075B6N4 114 aa10.01□□□□□ -0.81
LINC01116-202ENST00000339037 PDE6DO43924 150 aa10.01□□□□□ -0.81
LINC01116-202ENST00000339037 BCL2P10415 239 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms