RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 IGHV3-30P01768 117 aa14.05□□□□□ -0.16
PSPC1-201ENST00000338910 IGHV3-30-5P0DP03 117 aa14.05□□□□□ -0.16
PSPC1-201ENST00000338910 C10orf126Q8N4M7 172 aa14.05□□□□□ -0.16
PSPC1-201ENST00000338910 ANKRD29Q8N6D5 301 aa14.05□□□□□ -0.16
PSPC1-201ENST00000338910 LENEPQ9Y5L5 61 aa14.05□□□□□ -0.16
PSPC1-201ENST00000338910 IGKV3-7A0A075B6H7 116 aa14.04□□□□□ -0.16
PSPC1-201ENST00000338910 TSHBP01222 138 aa14.04□□□□□ -0.16
PSPC1-201ENST00000338910 KIR2DL4Q99706 377 aa14.04□□□□□ -0.16
PSPC1-201ENST00000338910 MYO9AB2RTY4 2548 aa14.04□□□□□ -0.16
PSPC1-201ENST00000338910 HERVK_113P61574 105 aa14.03□□□□□ -0.16
PSPC1-201ENST00000338910 C20orf173Q96LM9 149 aa14.03□□□□□ -0.16
PSPC1-201ENST00000338910 PAPPA-AS1Q5QFB9 102 aa14.03□□□□□ -0.16
PSPC1-201ENST00000338910 GPHB5Q86YW7 130 aa14.03□□□□□ -0.16
PSPC1-201ENST00000338910 ZFAND2AQ8N6M9 145 aa14.03□□□□□ -0.16
PSPC1-201ENST00000338910 SLC25A29Q8N8R3 303 aa14.03□□□□□ -0.16
PSPC1-201ENST00000338910 MGPP08493 103 aa14.02□□□□□ -0.16
PSPC1-201ENST00000338910 ANAPC13Q9BS18 74 aa14.02□□□□□ -0.16
PSPC1-201ENST00000338910 TMEM262E9PQX1 116 aa14.02□□□□□ -0.17
PSPC1-201ENST00000338910 S100A4P26447 101 aaKnown RBP14.02□□□□□ -0.17
PSPC1-201ENST00000338910 PSMB8P28062 276 aa14.02□□□□□ -0.17
PSPC1-201ENST00000338910 TSPEAR-AS2P59090 65 aa14.02□□□□□ -0.17
PSPC1-201ENST00000338910 Q6YL49 198 aa14.02□□□□□ -0.17
PSPC1-201ENST00000338910 RHPN1-AS1Q9BWJ2 59 aa14.02□□□□□ -0.17
PSPC1-201ENST00000338910 PHLDA3Q9Y5J5 127 aa14.02□□□□□ -0.17
PSPC1-201ENST00000338910 EMP1P54849 157 aa14.01□□□□□ -0.17
PSPC1-201ENST00000338910 ZFAND6Q6FIF0 208 aa14.01□□□□□ -0.17
PSPC1-201ENST00000338910 SHISA2Q6UWI4 295 aa14.01□□□□□ -0.17
PSPC1-201ENST00000338910 C9orf139Q6ZV77 190 aa14.01□□□□□ -0.17
PSPC1-201ENST00000338910 ACANP16112 2415 aa14.01□□□□□ -0.17
PSPC1-201ENST00000338910 IGIPA6NJ69 53 aa14.01□□□□□ -0.17
PSPC1-201ENST00000338910 PPP1R17O96001 155 aa14.01□□□□□ -0.17
PSPC1-201ENST00000338910 EDN2P20800 178 aa14.01□□□□□ -0.17
PSPC1-201ENST00000338910 ASIPP42127 132 aa14.01□□□□□ -0.17
PSPC1-201ENST00000338910 DEFB1P60022 68 aa14.01□□□□□ -0.17
PSPC1-201ENST00000338910 CITED1Q99966 193 aa14.01□□□□□ -0.17
PSPC1-201ENST00000338910 PRO1854Q9UHT4 67 aa14.01□□□□□ -0.17
PSPC1-201ENST00000338910 VPREB3Q9UKI3 123 aa14.01□□□□□ -0.17
PSPC1-201ENST00000338910 TRAV21A0A0B4J279 112 aa14□□□□□ -0.17
PSPC1-201ENST00000338910 SRD5A1P18405 259 aa14□□□□□ -0.17
PSPC1-201ENST00000338910 AMELXQ99217 191 aa14□□□□□ -0.17
PSPC1-201ENST00000338910 DAZ1Q9NQZ3 744 aaKnown RBP14□□□□□ -0.17
PSPC1-201ENST00000338910 TP53TG1Q9Y2A0 90 aa14□□□□□ -0.17
PSPC1-201ENST00000338910 SCGB1C2P0DMR2 95 aa13.99□□□□□ -0.17
PSPC1-201ENST00000338910 PMVKQ15126 192 aa13.99□□□□□ -0.17
PSPC1-201ENST00000338910 TEX29Q8N6K0 151 aa13.99□□□□□ -0.17
PSPC1-201ENST00000338910 POM121L12Q8N7R1 296 aa13.99□□□□□ -0.17
PSPC1-201ENST00000338910 M0QXV9 152 aa13.99□□□□□ -0.17
PSPC1-201ENST00000338910 MED14OSP0DP75 135 aa13.99□□□□□ -0.17
PSPC1-201ENST00000338910 ANXA2RQ3ZCQ2 193 aa13.99□□□□□ -0.17
PSPC1-201ENST00000338910 LINC00477Q96M19 166 aa13.99□□□□□ -0.17
PSPC1-201ENST00000338910 DUX5Q96PT3 197 aa13.99□□□□□ -0.17
PSPC1-201ENST00000338910 HECTD1Q9ULT8 2610 aa13.98□□□□□ -0.17
PSPC1-201ENST00000338910 ZNF580Q9UK33 172 aa13.98□□□□□ -0.17
PSPC1-201ENST00000338910 SOCS3O14543 225 aa13.98□□□□□ -0.17
PSPC1-201ENST00000338910 SLC25A20O43772 301 aa13.98□□□□□ -0.17
PSPC1-201ENST00000338910 RPL32P62910 135 aaKnown RBP13.98□□□□□ -0.17
PSPC1-201ENST00000338910 RNASE3P12724 160 aaKnown RBP13.96□□□□□ -0.17
PSPC1-201ENST00000338910 GAGE5Q13069 117 aa13.96□□□□□ -0.17
PSPC1-201ENST00000338910 GAGE6Q13070 117 aa13.96□□□□□ -0.17
PSPC1-201ENST00000338910 NHLRC4P0CG21 123 aaPredicted RBP13.96□□□□□ -0.17
PSPC1-201ENST00000338910 ZNRF2Q8NHG8 242 aa13.96□□□□□ -0.17
PSPC1-201ENST00000338910 IGHV4OR15-8A0A075B7B6 117 aa13.95□□□□□ -0.18
PSPC1-201ENST00000338910 A0A087WW49 117 aa13.95□□□□□ -0.18
PSPC1-201ENST00000338910 F6UB75 175 aa13.95□□□□□ -0.18
PSPC1-201ENST00000338910 LINC00315P59091 139 aa13.95□□□□□ -0.18
PSPC1-201ENST00000338910 TMEM141Q96I45 108 aa13.95□□□□□ -0.18
PSPC1-201ENST00000338910 SS18L2Q9UHA2 77 aa13.95□□□□□ -0.18
PSPC1-201ENST00000338910 KIF25-AS1Q9Y6Z4 181 aa13.95□□□□□ -0.18
PSPC1-201ENST00000338910 FASNP49327 2511 aaKnown RBP13.95□□□□□ -0.18
PSPC1-201ENST00000338910 C9JAW5 83 aa13.95□□□□□ -0.18
PSPC1-201ENST00000338910 EIF4EBP3O60516 100 aaPredicted RBP13.95□□□□□ -0.18
PSPC1-201ENST00000338910 POLR2KP53803 58 aaKnown RBP13.95□□□□□ -0.18
PSPC1-201ENST00000338910 TMEM170BQ5T4T1 132 aa13.95□□□□□ -0.18
PSPC1-201ENST00000338910 TIMM17AQ99595 171 aa13.95□□□□□ -0.18
PSPC1-201ENST00000338910 NF1P21359 2839 aa13.95□□□□□ -0.18
PSPC1-201ENST00000338910 J3QQQ9 107 aa13.94□□□□□ -0.18
PSPC1-201ENST00000338910 GNRH2O43555 120 aa13.94□□□□□ -0.18
PSPC1-201ENST00000338910 RPL39P62891 51 aaKnown RBP13.94□□□□□ -0.18
PSPC1-201ENST00000338910 OR10J6PQ8NGY7 276 aa13.94□□□□□ -0.18
PSPC1-201ENST00000338910 MUC4Q99102 2169 aa13.94□□□□□ -0.18
PSPC1-201ENST00000338910 CUBNO60494 3623 aa13.94□□□□□ -0.18
PSPC1-201ENST00000338910 RHODO00212 210 aa13.94□□□□□ -0.18
PSPC1-201ENST00000338910 NXPH4O95158 308 aa13.94□□□□□ -0.18
PSPC1-201ENST00000338910 ZNF876PQ49A33 203 aa13.94□□□□□ -0.18
PSPC1-201ENST00000338910 ZNF702PQ9H963 129 aa13.94□□□□□ -0.18
PSPC1-201ENST00000338910 A4D1N5 150 aa13.93□□□□□ -0.18
PSPC1-201ENST00000338910 IGHV3-33P01772 117 aa13.93□□□□□ -0.18
PSPC1-201ENST00000338910 TRPT1Q86TN4 253 aaKnown RBP13.93□□□□□ -0.18
PSPC1-201ENST00000338910 RAX2Q96IS3 184 aa13.93□□□□□ -0.18
PSPC1-201ENST00000338910 FAM110AQ9BQ89 295 aa13.93□□□□□ -0.18
PSPC1-201ENST00000338910 AKAP9Q99996 3911 aa13.93□□□□□ -0.18
PSPC1-201ENST00000338910 K7EMT4 169 aa13.93□□□□□ -0.18
PSPC1-201ENST00000338910 OVOL1O14753 267 aa13.93□□□□□ -0.18
PSPC1-201ENST00000338910 FAM19A4Q96LR4 140 aa13.93□□□□□ -0.18
PSPC1-201ENST00000338910 DEFB104AQ8WTQ1 72 aa13.92□□□□□ -0.18
PSPC1-201ENST00000338910 TMEM263Q8WUH6 116 aaKnown RBP13.92□□□□□ -0.18
PSPC1-201ENST00000338910 RNASE4P34096 147 aaKnown RBP13.92□□□□□ -0.18
PSPC1-201ENST00000338910 APRG1Q8IVJ8 170 aa13.92□□□□□ -0.18
PSPC1-201ENST00000338910 TMEM89A2RUT3 159 aa13.91□□□□□ -0.18
PSPC1-201ENST00000338910 P0DMU3 169 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms