RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 UBE2WQ96B02 151 aa15.21■□□□□ 0.03
RUNX3-202ENST00000338888 TRBV27A0A0K0K1C4 114 aa15.2■□□□□ 0.02
RUNX3-202ENST00000338888 ADARB2-AS1A8MUL3 147 aa15.2■□□□□ 0.02
RUNX3-202ENST00000338888 ZNF22P17026 224 aaPredicted RBP15.2■□□□□ 0.02
RUNX3-202ENST00000338888 ADORA2A-AS1P86434 159 aa15.19■□□□□ 0.02
RUNX3-202ENST00000338888 C2orf82Q6UX34 121 aa15.19■□□□□ 0.02
RUNX3-202ENST00000338888 SPTBN1Q01082 2364 aaKnown RBP15.19■□□□□ 0.02
RUNX3-202ENST00000338888 A0A0J9YXV3 536 aa15.18■□□□□ 0.02
RUNX3-202ENST00000338888 LGALS9O00182 355 aa15.18■□□□□ 0.02
RUNX3-202ENST00000338888 M0R2P5 195 aa15.18■□□□□ 0.02
RUNX3-202ENST00000338888 SIRPDQ9H106 197 aa15.18■□□□□ 0.02
RUNX3-202ENST00000338888 A0A0J9YXY3 114 aa15.17■□□□□ 0.02
RUNX3-202ENST00000338888 TRBV30A0A0K0K1B3 111 aa15.17■□□□□ 0.02
RUNX3-202ENST00000338888 PRSS2P07478 247 aa15.17■□□□□ 0.02
RUNX3-202ENST00000338888 SAA4P35542 130 aa15.17■□□□□ 0.02
RUNX3-202ENST00000338888 APRG1Q8IVJ8 170 aa15.17■□□□□ 0.02
RUNX3-202ENST00000338888 FAM110AQ9BQ89 295 aa15.17■□□□□ 0.02
RUNX3-202ENST00000338888 TMEM219Q86XT9 240 aa15.16■□□□□ 0.02
RUNX3-202ENST00000338888 PKD1L2Q7Z442 2459 aa15.16■□□□□ 0.02
RUNX3-202ENST00000338888 H7C423 109 aa15.15■□□□□ 0.02
RUNX3-202ENST00000338888 IGHV1-69P01742 117 aa15.15■□□□□ 0.02
RUNX3-202ENST00000338888 LINC01600Q96MT4 127 aa15.15■□□□□ 0.02
RUNX3-202ENST00000338888 ZFHX3Q15911 3703 aa15.15■□□□□ 0.02
RUNX3-202ENST00000338888 TRAV41A0A0B4J266 112 aa15.14■□□□□ 0.01
RUNX3-202ENST00000338888 UBE2E1P51965 193 aa15.14■□□□□ 0.01
RUNX3-202ENST00000338888 ZNF56Q15929 161 aa15.14■□□□□ 0.01
RUNX3-202ENST00000338888 SPXQ9BT56 116 aa15.14■□□□□ 0.01
RUNX3-202ENST00000338888 MEIG1Q5JSS6 88 aa15.14■□□□□ 0.01
RUNX3-202ENST00000338888 Q6ZSV7 163 aa15.14■□□□□ 0.01
RUNX3-202ENST00000338888 CACNA1AO00555 2505 aa15.14■□□□□ 0.01
RUNX3-202ENST00000338888 TRAV12-3A0A0B4J271 114 aa15.13■□□□□ 0.01
RUNX3-202ENST00000338888 TRBV6-5A0A0K0K1A5 114 aa15.13■□□□□ 0.01
RUNX3-202ENST00000338888 C5orf56Q8N8D9 126 aa15.13■□□□□ 0.01
RUNX3-202ENST00000338888 DUX3Q96PT4 197 aa15.13■□□□□ 0.01
RUNX3-202ENST00000338888 PRORYQ9H606 182 aa15.13■□□□□ 0.01
RUNX3-202ENST00000338888 CFAP161Q6P656 301 aa15.13■□□□□ 0.01
RUNX3-202ENST00000338888 ICOSQ9Y6W8 199 aa15.13■□□□□ 0.01
RUNX3-202ENST00000338888 HIVEP3Q5T1R4 2406 aa15.12■□□□□ 0.01
RUNX3-202ENST00000338888 IGHV3-11P01762 117 aa15.12■□□□□ 0.01
RUNX3-202ENST00000338888 IGHV3-30-3P0DP02 117 aa15.12■□□□□ 0.01
RUNX3-202ENST00000338888 NPC2P61916 151 aa15.12■□□□□ 0.01
RUNX3-202ENST00000338888 CLEC2BQ92478 149 aa15.12■□□□□ 0.01
RUNX3-202ENST00000338888 NSUN5P1Q3KNT7 163 aa15.12■□□□□ 0.01
RUNX3-202ENST00000338888 A0A0J9YX75 114 aa15.11■□□□□ 0.01
RUNX3-202ENST00000338888 KLLNB2CW77 178 aa15.11■□□□□ 0.01
RUNX3-202ENST00000338888 M0QY20 66 aa15.11■□□□□ 0.01
RUNX3-202ENST00000338888 NDUFA4O00483 81 aa15.11■□□□□ 0.01
RUNX3-202ENST00000338888 FBXL19-AS1Q494R0 122 aa15.11■□□□□ 0.01
RUNX3-202ENST00000338888 LITAFQ99732 161 aa15.11■□□□□ 0.01
RUNX3-202ENST00000338888 CHCHD5Q9BSY4 110 aa15.11■□□□□ 0.01
RUNX3-202ENST00000338888 FAM223BA6NKX1 122 aa15.11■□□□□ 0.01
RUNX3-202ENST00000338888 ADAMTSL4-AS1Q5T5F5 129 aa15.11■□□□□ 0.01
RUNX3-202ENST00000338888 FAM223AQ8IWN6 122 aa15.11■□□□□ 0.01
RUNX3-202ENST00000338888 C3orf56Q8N813 242 aa15.11■□□□□ 0.01
RUNX3-202ENST00000338888 C20orf203Q8NBC4 194 aa15.11■□□□□ 0.01
RUNX3-202ENST00000338888 IGLV4-3A0A075B6K6 122 aa15.1■□□□□ 0.01
RUNX3-202ENST00000338888 TRAV8-3A0A0A6YYJ7 113 aa15.1■□□□□ 0.01
RUNX3-202ENST00000338888 RHOHQ15669 191 aa15.1■□□□□ 0.01
RUNX3-202ENST00000338888 MDFICQ9P1T7 246 aa15.1■□□□□ 0.01
RUNX3-202ENST00000338888 TIMM21Q9BVV7 248 aa15.09■□□□□ 0.01
RUNX3-202ENST00000338888 RHPN1-AS1Q9BWJ2 59 aa15.09■□□□□ 0.01
RUNX3-202ENST00000338888 COX6CP09669 75 aa15.08■□□□□ 0
RUNX3-202ENST00000338888 HRNRQ86YZ3 2850 aaPredicted RBP15.08■□□□□ 0
RUNX3-202ENST00000338888 H3BT86 120 aa15.07■□□□□ 0
RUNX3-202ENST00000338888 C11orf71Q6IPW1 123 aa15.07■□□□□ 0
RUNX3-202ENST00000338888 PRRC2AP48634 2157 aaKnown RBP15.07■□□□□ 0
RUNX3-202ENST00000338888 ACACBO00763 2458 aa15.06■□□□□ 0
RUNX3-202ENST00000338888 EDN2P20800 178 aa15.06■□□□□ 0
RUNX3-202ENST00000338888 IGHV3OR16-10A0A075B7F0 116 aa15.05■□□□□ 0
RUNX3-202ENST00000338888 A8MZ25 164 aa15.05■□□□□ 0
RUNX3-202ENST00000338888 IGKV3-20P01619 116 aa15.05■□□□□ 0
RUNX3-202ENST00000338888 C19orf54Q5BKX5 351 aa15.05■□□□□ 0
RUNX3-202ENST00000338888 TRAV12-2A0A075B6T6 113 aa15.05■□□□□ -0
RUNX3-202ENST00000338888 IGHV3-16A0A0C4DH30 117 aa15.05■□□□□ -0
RUNX3-202ENST00000338888 I3L3M4 83 aa15.05■□□□□ -0
RUNX3-202ENST00000338888 MRPL23Q16540 153 aaKnown RBP15.05■□□□□ -0
RUNX3-202ENST00000338888 RNASE13Q5GAN3 156 aaKnown RBP15.05■□□□□ -0
RUNX3-202ENST00000338888 NPFFO15130 113 aa15.04■□□□□ -0
RUNX3-202ENST00000338888 CEMP1Q6PRD7 247 aaPredicted RBP15.04■□□□□ -0
RUNX3-202ENST00000338888 NDUFA12Q9UI09 145 aa15.04■□□□□ -0
RUNX3-202ENST00000338888 SPTAN1Q13813 2472 aaKnown RBP15.04■□□□□ -0
RUNX3-202ENST00000338888 C9orf85Q96MD7 179 aa15.03■□□□□ -0
RUNX3-202ENST00000338888 TRGV11A0A075B6L2 103 aa15.03■□□□□ -0
RUNX3-202ENST00000338888 CD28P10747 220 aa15.03■□□□□ -0
RUNX3-202ENST00000338888 GNLYP22749 145 aa15.03■□□□□ -0
RUNX3-202ENST00000338888 MOB4Q9Y3A3 225 aa15.03■□□□□ -0
RUNX3-202ENST00000338888 COL12A1Q99715 3063 aa15.02■□□□□ -0
RUNX3-202ENST00000338888 LST1O00453 97 aa15.02■□□□□ -0
RUNX3-202ENST00000338888 SPANXA1Q9NS26 97 aa15.02□□□□□ -0.01
RUNX3-202ENST00000338888 SPANXDQ9BXN6 97 aa15.01□□□□□ -0.01
RUNX3-202ENST00000338888 SPANXCQ9NY87 97 aa15.01□□□□□ -0.01
RUNX3-202ENST00000338888 FAM240AA0A1B0GVK7 77 aa15.01□□□□□ -0.01
RUNX3-202ENST00000338888 MIAQ16674 131 aa15.01□□□□□ -0.01
RUNX3-202ENST00000338888 AKAP6Q13023 2319 aa15□□□□□ -0.01
RUNX3-202ENST00000338888 IGHV1-58A0A0C4DH39 117 aa15□□□□□ -0.01
RUNX3-202ENST00000338888 CFAP46Q8IYW2 2715 aa15□□□□□ -0.01
RUNX3-202ENST00000338888 DEFB121Q5J5C9 76 aa15□□□□□ -0.01
RUNX3-202ENST00000338888 FAM104AQ969W3 186 aa15□□□□□ -0.01
RUNX3-202ENST00000338888 PF4V1P10720 104 aa14.99□□□□□ -0.01
RUNX3-202ENST00000338888 DAND5Q8N907 189 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms