RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 UQCR10Q9UDW1 63 aa11.74□□□□□ -0.53
HPS1-202ENST00000338546 H0Y8G0 127 aa11.73□□□□□ -0.53
HPS1-202ENST00000338546 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.73□□□□□ -0.53
HPS1-202ENST00000338546 IGHV3-53P01767 116 aa11.73□□□□□ -0.53
HPS1-202ENST00000338546 PRSS1P07477 247 aa11.73□□□□□ -0.53
HPS1-202ENST00000338546 IGLC3P0DOY3 106 aa11.73□□□□□ -0.53
HPS1-202ENST00000338546 RIPPLY3P57055 190 aa11.73□□□□□ -0.53
HPS1-202ENST00000338546 C18orf15Q96N68 181 aa11.73□□□□□ -0.53
HPS1-202ENST00000338546 OVOL2Q9BRP0 275 aa11.73□□□□□ -0.53
HPS1-202ENST00000338546 MRPL16Q9NX20 251 aaKnown RBP11.73□□□□□ -0.53
HPS1-202ENST00000338546 TRAV12-1A0A0B4J245 112 aa11.72□□□□□ -0.53
HPS1-202ENST00000338546 I3L3M4 83 aa11.72□□□□□ -0.53
HPS1-202ENST00000338546 IGLL1P15814 213 aa11.72□□□□□ -0.53
HPS1-202ENST00000338546 RRN3P1Q2M238 152 aa11.72□□□□□ -0.53
HPS1-202ENST00000338546 KRTAP24-1Q3LI83 254 aa11.72□□□□□ -0.53
HPS1-202ENST00000338546 C2orf66Q6UXQ4 117 aa11.72□□□□□ -0.53
HPS1-202ENST00000338546 CYSLTR1Q9Y271 337 aa11.72□□□□□ -0.53
HPS1-202ENST00000338546 TEP1Q99973 2627 aaKnown RBP11.72□□□□□ -0.53
HPS1-202ENST00000338546 JMJD1CQ15652 2540 aa11.72□□□□□ -0.53
HPS1-202ENST00000338546 ERASQ7Z444 233 aa11.71□□□□□ -0.53
HPS1-202ENST00000338546 MRPL52Q86TS9 123 aaKnown RBP11.71□□□□□ -0.53
HPS1-202ENST00000338546 KIR2DL5BQ8NHK3 375 aa11.71□□□□□ -0.53
HPS1-202ENST00000338546 SCGB3A1Q96QR1 104 aa11.71□□□□□ -0.53
HPS1-202ENST00000338546 ZMAT4Q9H898 229 aa11.71□□□□□ -0.53
HPS1-202ENST00000338546 TRGV1A0A0A0MS02 117 aa11.71□□□□□ -0.54
HPS1-202ENST00000338546 TRAV4A0A0B4J268 109 aa11.71□□□□□ -0.54
HPS1-202ENST00000338546 SMIM9A6NGZ8 99 aa11.71□□□□□ -0.54
HPS1-202ENST00000338546 ODF1Q14990 250 aa11.71□□□□□ -0.54
HPS1-202ENST00000338546 Q6ZN92 141 aa11.71□□□□□ -0.54
HPS1-202ENST00000338546 SPATA3Q8NHX4 192 aa11.71□□□□□ -0.54
HPS1-202ENST00000338546 TNFRSF18Q9Y5U5 241 aa11.71□□□□□ -0.54
HPS1-202ENST00000338546 ATRQ13535 2644 aa11.7□□□□□ -0.54
HPS1-202ENST00000338546 MAJINQ3KP22 176 aa11.7□□□□□ -0.54
HPS1-202ENST00000338546 OR4C5Q8NGB2 326 aa11.7□□□□□ -0.54
HPS1-202ENST00000338546 TMEM141Q96I45 108 aa11.7□□□□□ -0.54
HPS1-202ENST00000338546 C14orf144Q96I85 54 aa11.7□□□□□ -0.54
HPS1-202ENST00000338546 NACAE9PAV3 2078 aa11.69□□□□□ -0.54
HPS1-202ENST00000338546 A0A087WX48 190 aa11.69□□□□□ -0.54
HPS1-202ENST00000338546 PLAC8L1A1L4L8 177 aa11.69□□□□□ -0.54
HPS1-202ENST00000338546 SHISA2Q6UWI4 295 aa11.69□□□□□ -0.54
HPS1-202ENST00000338546 IGHV3-73A0A0B4J1V6 119 aa11.68□□□□□ -0.54
HPS1-202ENST00000338546 TIMM17AQ99595 171 aa11.68□□□□□ -0.54
HPS1-202ENST00000338546 PMCHL2Q9BQD1 86 aa11.68□□□□□ -0.54
HPS1-202ENST00000338546 TRBV10-1A0A0K0K1A3 114 aa11.67□□□□□ -0.54
HPS1-202ENST00000338546 hDV102S1A0JD36 115 aa11.67□□□□□ -0.54
HPS1-202ENST00000338546 TSHBP01222 138 aa11.67□□□□□ -0.54
HPS1-202ENST00000338546 APOC4P55056 127 aa11.67□□□□□ -0.54
HPS1-202ENST00000338546 NEGR1Q7Z3B1 354 aa11.67□□□□□ -0.54
HPS1-202ENST00000338546 NIPBLQ6KC79 2804 aaeCLIP11.67□□□□□ -0.54
HPS1-202ENST00000338546 IGIPA6NJ69 53 aa11.67□□□□□ -0.54
HPS1-202ENST00000338546 DPM2O94777 84 aa11.67□□□□□ -0.54
HPS1-202ENST00000338546 LBHQ53QV2 105 aaPredicted RBP11.67□□□□□ -0.54
HPS1-202ENST00000338546 Q6ZTI0 123 aa11.67□□□□□ -0.54
HPS1-202ENST00000338546 NEXN-AS1Q8NBZ9 246 aa11.67□□□□□ -0.54
HPS1-202ENST00000338546 NOP10Q9NPE3 64 aaKnown RBP11.67□□□□□ -0.54
HPS1-202ENST00000338546 DKK2Q9UBU2 259 aa11.67□□□□□ -0.54
HPS1-202ENST00000338546 IGKCP01834 107 aa11.66□□□□□ -0.54
HPS1-202ENST00000338546 PLNP26678 52 aa11.66□□□□□ -0.54
HPS1-202ENST00000338546 Q6ZSN1 163 aa11.66□□□□□ -0.54
HPS1-202ENST00000338546 C3orf56Q8N813 242 aa11.66□□□□□ -0.54
HPS1-202ENST00000338546 TP53TG1Q9Y2A0 90 aa11.66□□□□□ -0.54
HPS1-202ENST00000338546 TENM1Q9UKZ4 2725 aa11.65□□□□□ -0.54
HPS1-202ENST00000338546 C20orf203Q8NBC4 194 aa11.65□□□□□ -0.54
HPS1-202ENST00000338546 ZMAT5Q9UDW3 170 aaKnown RBP11.65□□□□□ -0.54
HPS1-202ENST00000338546 MRPS16Q9Y3D3 137 aaKnown RBP11.65□□□□□ -0.54
HPS1-202ENST00000338546 NOTCH3Q9UM47 2321 aa11.65□□□□□ -0.54
HPS1-202ENST00000338546 F8VRH5 84 aa11.64□□□□□ -0.55
HPS1-202ENST00000338546 NPSP0C0P6 89 aa11.64□□□□□ -0.55
HPS1-202ENST00000338546 BAALCQ8WXS3 180 aa11.64□□□□□ -0.55
HPS1-202ENST00000338546 SLC25A34Q6PIV7 304 aa11.63□□□□□ -0.55
HPS1-202ENST00000338546 ZNF479Q96JC4 524 aa11.63□□□□□ -0.55
HPS1-202ENST00000338546 P0DMU3 169 aa11.62□□□□□ -0.55
HPS1-202ENST00000338546 FAM231AP0DMU4 169 aa11.62□□□□□ -0.55
HPS1-202ENST00000338546 FAM231CP0DMU5 169 aa11.62□□□□□ -0.55
HPS1-202ENST00000338546 COX8AP10176 69 aa11.62□□□□□ -0.55
HPS1-202ENST00000338546 HNRNPA3P51991 378 aaKnown RBP11.62□□□□□ -0.55
HPS1-202ENST00000338546 C12orf54Q6X4T0 127 aa11.62□□□□□ -0.55
HPS1-202ENST00000338546 LINC00612Q8N6U2 182 aa11.62□□□□□ -0.55
HPS1-202ENST00000338546 MRPL35Q9NZE8 188 aaKnown RBP11.62□□□□□ -0.55
HPS1-202ENST00000338546 HHLA3Q9XRX5 114 aa11.62□□□□□ -0.55
HPS1-202ENST00000338546 PYGO1Q9Y3Y4 419 aa11.62□□□□□ -0.55
HPS1-202ENST00000338546 K7EQD1 137 aa11.62□□□□□ -0.55
HPS1-202ENST00000338546 M0R143 59 aa11.62□□□□□ -0.55
HPS1-202ENST00000338546 PAPPA-AS1Q5QFB9 102 aa11.62□□□□□ -0.55
HPS1-202ENST00000338546 CHTOPQ9Y3Y2 248 aaKnown RBP11.62□□□□□ -0.55
HPS1-202ENST00000338546 TRBV7-3A0A075B6L6 115 aa11.61□□□□□ -0.55
HPS1-202ENST00000338546 TRGV2A0A075B6R0 118 aa11.61□□□□□ -0.55
HPS1-202ENST00000338546 DLEU1O43261 78 aa11.61□□□□□ -0.55
HPS1-202ENST00000338546 CRYBA4P53673 196 aa11.61□□□□□ -0.55
HPS1-202ENST00000338546 RPL36AP83881 106 aaKnown RBP11.61□□□□□ -0.55
HPS1-202ENST00000338546 PMVKQ15126 192 aa11.61□□□□□ -0.55
HPS1-202ENST00000338546 PRIMA1Q86XR5 153 aa11.61□□□□□ -0.55
HPS1-202ENST00000338546 RPL36ALQ969Q0 106 aaKnown RBP11.61□□□□□ -0.55
HPS1-202ENST00000338546 X6R8D5 127 aa11.61□□□□□ -0.55
HPS1-202ENST00000338546 TRBV6-4A0A1B0GX49 114 aa11.6□□□□□ -0.55
HPS1-202ENST00000338546 PRSS29PA6NIE9 313 aa11.6□□□□□ -0.55
HPS1-202ENST00000338546 RPL39P62891 51 aaKnown RBP11.6□□□□□ -0.55
HPS1-202ENST00000338546 ANKRD39Q53RE8 183 aa11.6□□□□□ -0.55
HPS1-202ENST00000338546 VWFP04275 2813 aa11.6□□□□□ -0.55
HPS1-202ENST00000338546 GAGE12BA1L429 117 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms