RNA–Protein interactions for RNA: ENST00000336890.9

LCK-202, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCK, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-202ENST00000336890 IGHV4-38-2P0DP08 117 aa12.22□□□□□ -0.45
LCK-202ENST00000336890 SFTA2Q6UW10 78 aa12.22□□□□□ -0.45
LCK-202ENST00000336890 RNF152Q8N8N0 203 aa12.22□□□□□ -0.45
LCK-202ENST00000336890 C10orf105Q8TEF2 133 aa12.22□□□□□ -0.45
LCK-202ENST00000336890 PYGO1Q9Y3Y4 419 aa12.22□□□□□ -0.45
LCK-202ENST00000336890 IGHV4-61A0A0C4DH41 118 aa12.21□□□□□ -0.45
LCK-202ENST00000336890 A4D1N5 150 aa12.21□□□□□ -0.45
LCK-202ENST00000336890 IGHV3-33P01772 117 aa12.21□□□□□ -0.45
LCK-202ENST00000336890 ZNF22P17026 224 aaPredicted RBP12.21□□□□□ -0.45
LCK-202ENST00000336890 SRD5A1P18405 259 aa12.21□□□□□ -0.45
LCK-202ENST00000336890 Q8N1Y9 231 aa12.21□□□□□ -0.45
LCK-202ENST00000336890 SLC25A20O43772 301 aa12.2□□□□□ -0.46
LCK-202ENST00000336890 BLCAPP62952 87 aa12.2□□□□□ -0.46
LCK-202ENST00000336890 TMEM263Q8WUH6 116 aaKnown RBP12.2□□□□□ -0.46
LCK-202ENST00000336890 CARD19Q96LW7 228 aa12.2□□□□□ -0.46
LCK-202ENST00000336890 ANKRD29Q8N6D5 301 aa12.2□□□□□ -0.46
LCK-202ENST00000336890 ZFYVE26Q68DK2 2539 aa12.19□□□□□ -0.46
LCK-202ENST00000336890 K7EQG2 157 aa12.19□□□□□ -0.46
LCK-202ENST00000336890 PSMB8P28062 276 aa12.19□□□□□ -0.46
LCK-202ENST00000336890 ATXN8Q156A1 80 aa12.19□□□□□ -0.46
LCK-202ENST00000336890 M0R2P5 195 aa12.19□□□□□ -0.46
LCK-202ENST00000336890 MSMBP08118 114 aa12.19□□□□□ -0.46
LCK-202ENST00000336890 PTH2Q96A98 100 aa12.19□□□□□ -0.46
LCK-202ENST00000336890 LINC01600Q96MT4 127 aa12.19□□□□□ -0.46
LCK-202ENST00000336890 GEMIN7Q9H840 131 aaKnown RBP12.19□□□□□ -0.46
LCK-202ENST00000336890 IGLV4-3A0A075B6K6 122 aa12.18□□□□□ -0.46
LCK-202ENST00000336890 TRAV2A0A0B4J234 112 aa12.18□□□□□ -0.46
LCK-202ENST00000336890 GATA3P23771 443 aa12.18□□□□□ -0.46
LCK-202ENST00000336890 ABCA2Q9BZC7 2435 aa12.18□□□□□ -0.46
LCK-202ENST00000336890 CCL19Q99731 98 aa12.17□□□□□ -0.46
LCK-202ENST00000336890 USP9XQ93008 2570 aaPredicted RBP12.17□□□□□ -0.46
LCK-202ENST00000336890 XGP55808 180 aa12.17□□□□□ -0.46
LCK-202ENST00000336890 TIMM21Q9BVV7 248 aa12.17□□□□□ -0.46
LCK-202ENST00000336890 CSMD1Q96PZ7 3565 aa12.17□□□□□ -0.46
LCK-202ENST00000336890 EPG5Q9HCE0 2579 aa12.16□□□□□ -0.46
LCK-202ENST00000336890 C9JAW5 83 aa12.16□□□□□ -0.46
LCK-202ENST00000336890 Q1RN00 199 aa12.16□□□□□ -0.46
LCK-202ENST00000336890 PIK3CD-AS1Q5SR53 167 aa12.16□□□□□ -0.46
LCK-202ENST00000336890 MUSTN1Q8IVN3 82 aa12.16□□□□□ -0.46
LCK-202ENST00000336890 TRBV30A0A0K0K1B3 111 aa12.16□□□□□ -0.46
LCK-202ENST00000336890 MT-ATP8P03928 68 aa12.16□□□□□ -0.46
LCK-202ENST00000336890 MRPS36P82909 103 aaKnown RBP12.16□□□□□ -0.46
LCK-202ENST00000336890 ZNF462Q96JM2 2506 aa12.15□□□□□ -0.46
LCK-202ENST00000336890 TRAV12-2A0A075B6T6 113 aa12.15□□□□□ -0.46
LCK-202ENST00000336890 A0A0J9YXY3 114 aa12.15□□□□□ -0.46
LCK-202ENST00000336890 CD28P10747 220 aa12.15□□□□□ -0.46
LCK-202ENST00000336890 FHL3Q13643 280 aa12.15□□□□□ -0.46
LCK-202ENST00000336890 WFDC12Q8WWY7 111 aa12.15□□□□□ -0.46
LCK-202ENST00000336890 RAX2Q96IS3 184 aa12.15□□□□□ -0.46
LCK-202ENST00000336890 COL12A1Q99715 3063 aa12.15□□□□□ -0.46
LCK-202ENST00000336890 FLNCQ14315 2725 aa12.15□□□□□ -0.46
LCK-202ENST00000336890 SPINK13Q1W4C9 94 aa12.14□□□□□ -0.47
LCK-202ENST00000336890 SPTAN1Q13813 2472 aaKnown RBP12.14□□□□□ -0.47
LCK-202ENST00000336890 A0A0J9YXV3 536 aa12.14□□□□□ -0.47
LCK-202ENST00000336890 B4DSR2 109 aa12.14□□□□□ -0.47
LCK-202ENST00000336890 RNF183Q96D59 192 aa12.14□□□□□ -0.47
LCK-202ENST00000336890 SPANXDQ9BXN6 97 aa12.14□□□□□ -0.47
LCK-202ENST00000336890 SPANXCQ9NY87 97 aa12.14□□□□□ -0.47
LCK-202ENST00000336890 ZFAND6Q6FIF0 208 aa12.13□□□□□ -0.47
LCK-202ENST00000336890 DEFB104AQ8WTQ1 72 aa12.13□□□□□ -0.47
LCK-202ENST00000336890 OPRPNQ99935 248 aaPredicted RBP12.13□□□□□ -0.47
LCK-202ENST00000336890 IGKV3-20P01619 116 aa12.13□□□□□ -0.47
LCK-202ENST00000336890 COX6CP09669 75 aa12.13□□□□□ -0.47
LCK-202ENST00000336890 IGHV3-30-3P0DP02 117 aa12.13□□□□□ -0.47
LCK-202ENST00000336890 LINC01620Q4KN68 170 aa12.13□□□□□ -0.47
LCK-202ENST00000336890 YAE1D1Q9NRH1 226 aa12.13□□□□□ -0.47
LCK-202ENST00000336890 SPANXA1Q9NS26 97 aa12.13□□□□□ -0.47
LCK-202ENST00000336890 EDN2P20800 178 aa12.12□□□□□ -0.47
LCK-202ENST00000336890 RPL13AP40429 203 aaKnown RBP12.12□□□□□ -0.47
LCK-202ENST00000336890 MYO18BQ8IUG5 2567 aa12.12□□□□□ -0.47
LCK-202ENST00000336890 IGHV1-58A0A0C4DH39 117 aa12.11□□□□□ -0.47
LCK-202ENST00000336890 TGFAP01135 160 aa12.11□□□□□ -0.47
LCK-202ENST00000336890 ATP5J2P56134 94 aa12.11□□□□□ -0.47
LCK-202ENST00000336890 TEX29Q8N6K0 151 aa12.11□□□□□ -0.47
LCK-202ENST00000336890 TNFRSF18Q9Y5U5 241 aa12.11□□□□□ -0.47
LCK-202ENST00000336890 TINCRA0A1B0GVN0 87 aa12.11□□□□□ -0.47
LCK-202ENST00000336890 DSCR9P59020 149 aa12.11□□□□□ -0.47
LCK-202ENST00000336890 UBR5O95071 2799 aaPredicted RBP12.1□□□□□ -0.47
LCK-202ENST00000336890 TRBV10-2A0A0K0K1G8 114 aa12.1□□□□□ -0.47
LCK-202ENST00000336890 Q5PR19 223 aa12.1□□□□□ -0.47
LCK-202ENST00000336890 IGHV3-64A0A075B6Q5 118 aa12.1□□□□□ -0.47
LCK-202ENST00000336890 TIMM17BO60830 172 aa12.1□□□□□ -0.47
LCK-202ENST00000336890 H7C2G1 150 aa12.09□□□□□ -0.47
LCK-202ENST00000336890 ELANEP08246 267 aa12.09□□□□□ -0.47
LCK-202ENST00000336890 SPXQ9BT56 116 aa12.09□□□□□ -0.47
LCK-202ENST00000336890 AKAP6Q13023 2319 aa12.09□□□□□ -0.47
LCK-202ENST00000336890 IGHV4-30-2A0A087WSY4 118 aa12.08□□□□□ -0.47
LCK-202ENST00000336890 EIF4EBP3O60516 100 aaPredicted RBP12.08□□□□□ -0.47
LCK-202ENST00000336890 MIAQ16674 131 aa12.08□□□□□ -0.47
LCK-202ENST00000336890 NDUFA12Q9UI09 145 aa12.08□□□□□ -0.47
LCK-202ENST00000336890 H3BT86 120 aa12.08□□□□□ -0.48
LCK-202ENST00000336890 SNCGO76070 127 aa12.08□□□□□ -0.48
LCK-202ENST00000336890 IFITM1P13164 125 aa12.08□□□□□ -0.48
LCK-202ENST00000336890 DNAJC30Q96LL9 226 aa12.08□□□□□ -0.48
LCK-202ENST00000336890 LITAFQ99732 161 aa12.08□□□□□ -0.48
LCK-202ENST00000336890 TRAV26-1A0A087WT03 109 aa12.07□□□□□ -0.48
LCK-202ENST00000336890 A8MTW9 85 aa12.07□□□□□ -0.48
LCK-202ENST00000336890 ZNF415Q09FC8 603 aa12.07□□□□□ -0.48
LCK-202ENST00000336890 TMEM95Q3KNT9 176 aa12.07□□□□□ -0.48
LCK-202ENST00000336890 VSIG2Q96IQ7 327 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms