RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 C11orf53Q8IXP5 236 aa4.2□□□□□ -1.74
PTPRB-202ENST00000334414 TCF20Q9UGU0 1960 aaKnown RBP4.2□□□□□ -1.74
PTPRB-202ENST00000334414 IGHV4-4A0A075B6R2 117 aa4.2□□□□□ -1.74
PTPRB-202ENST00000334414 TRBV27A0A0K0K1C4 114 aa4.2□□□□□ -1.74
PTPRB-202ENST00000334414 IGF2-ASQ6U949 168 aa4.2□□□□□ -1.74
PTPRB-202ENST00000334414 THADAQ6YHU6 1953 aa4.2□□□□□ -1.74
PTPRB-202ENST00000334414 Q9HAA7 133 aa4.2□□□□□ -1.74
PTPRB-202ENST00000334414 PLA2G2EQ9NZK7 142 aa4.2□□□□□ -1.74
PTPRB-202ENST00000334414 TRBV6-5A0A0K0K1A5 114 aa4.2□□□□□ -1.74
PTPRB-202ENST00000334414 CNTRLQ7Z7A1 2325 aa4.2□□□□□ -1.74
PTPRB-202ENST00000334414 A0A1B0GW54 56 aa4.2□□□□□ -1.74
PTPRB-202ENST00000334414 TRBV7-7A0A0K0K1E9 115 aa4.2□□□□□ -1.74
PTPRB-202ENST00000334414 MRGPRG-AS1Q2M3A8 158 aa4.2□□□□□ -1.74
PTPRB-202ENST00000334414 HEATR1Q9H583 2144 aaKnown RBP4.2□□□□□ -1.74
PTPRB-202ENST00000334414 RSPO1Q2MKA7 263 aaPredicted RBP4.2□□□□□ -1.74
PTPRB-202ENST00000334414 IL17DQ8TAD2 202 aa4.2□□□□□ -1.74
PTPRB-202ENST00000334414 UBE2D3P61077 147 aa4.2□□□□□ -1.74
PTPRB-202ENST00000334414 UNC13CQ8NB66 2214 aa4.19□□□□□ -1.74
PTPRB-202ENST00000334414 IGKV1OR2-108A0A075B7D4 117 aa4.19□□□□□ -1.74
PTPRB-202ENST00000334414 ZNF22P17026 224 aaPredicted RBP4.19□□□□□ -1.74
PTPRB-202ENST00000334414 WFDC10AQ9H1F0 79 aa4.19□□□□□ -1.74
PTPRB-202ENST00000334414 PRB4P10163 310 aaPredicted RBP4.19□□□□□ -1.74
PTPRB-202ENST00000334414 FAM19A5Q7Z5A7 132 aaPredicted RBP4.19□□□□□ -1.74
PTPRB-202ENST00000334414 LIMD2Q9BT23 127 aa4.19□□□□□ -1.74
PTPRB-202ENST00000334414 PRO0255Q9UI72 69 aa4.19□□□□□ -1.74
PTPRB-202ENST00000334414 IGLV4-3A0A075B6K6 122 aa4.19□□□□□ -1.74
PTPRB-202ENST00000334414 IGLV2-8P01709 118 aa4.19□□□□□ -1.74
PTPRB-202ENST00000334414 SP5Q6BEB4 398 aaPredicted RBP4.19□□□□□ -1.74
PTPRB-202ENST00000334414 ODF3L1Q8IXM7 274 aa4.19□□□□□ -1.74
PTPRB-202ENST00000334414 ADAMTS9Q9P2N4 1935 aa4.19□□□□□ -1.74
PTPRB-202ENST00000334414 PROK2Q9HC23 129 aa4.19□□□□□ -1.74
PTPRB-202ENST00000334414 ALPK3Q96L96 1907 aa4.19□□□□□ -1.74
PTPRB-202ENST00000334414 ZNF503-AS2A6NEH8 195 aa4.19□□□□□ -1.74
PTPRB-202ENST00000334414 REG3AQ06141 175 aa4.18□□□□□ -1.74
PTPRB-202ENST00000334414 Q8N976 141 aa4.18□□□□□ -1.74
PTPRB-202ENST00000334414 LINC00474Q9P2X8 69 aa4.18□□□□□ -1.74
PTPRB-202ENST00000334414 MYCNOSP40205 109 aa4.18□□□□□ -1.74
PTPRB-202ENST00000334414 TRBV6-4A0A1B0GX49 114 aa4.18□□□□□ -1.74
PTPRB-202ENST00000334414 CRYGAP11844 174 aa4.18□□□□□ -1.74
PTPRB-202ENST00000334414 C3orf56Q8N813 242 aa4.18□□□□□ -1.74
PTPRB-202ENST00000334414 ESM1Q9NQ30 184 aa4.18□□□□□ -1.74
PTPRB-202ENST00000334414 CLUHP3Q96NS8 147 aa4.18□□□□□ -1.74
PTPRB-202ENST00000334414 MSRB1Q9NZV6 116 aa4.18□□□□□ -1.74
PTPRB-202ENST00000334414 RP1P56715 2156 aa4.18□□□□□ -1.74
PTPRB-202ENST00000334414 M0R378 163 aa4.18□□□□□ -1.74
PTPRB-202ENST00000334414 DIAPH2-AS1Q14236 149 aa4.18□□□□□ -1.74
PTPRB-202ENST00000334414 TTTY13Q9BZ97 58 aa4.18□□□□□ -1.74
PTPRB-202ENST00000334414 ATG2AQ2TAZ0 1938 aa4.17□□□□□ -1.74
PTPRB-202ENST00000334414 HRCT1Q6UXD1 115 aa4.17□□□□□ -1.74
PTPRB-202ENST00000334414 AJUBAQ96IF1 538 aa4.17□□□□□ -1.74
PTPRB-202ENST00000334414 ZNRD1Q9P1U0 126 aa4.17□□□□□ -1.74
PTPRB-202ENST00000334414 EML6Q6ZMW3 1958 aa4.17□□□□□ -1.74
PTPRB-202ENST00000334414 hDV103S1A0JD37 113 aa4.17□□□□□ -1.74
PTPRB-202ENST00000334414 SNURFQ9Y675 71 aa4.17□□□□□ -1.74
PTPRB-202ENST00000334414 DEFB121Q5J5C9 76 aa4.17□□□□□ -1.74
PTPRB-202ENST00000334414 WFDC10BQ8IUB3 73 aa4.17□□□□□ -1.74
PTPRB-202ENST00000334414 IGLV10-54A0A075B6I4 117 aa4.16□□□□□ -1.74
PTPRB-202ENST00000334414 M0QY20 66 aa4.16□□□□□ -1.74
PTPRB-202ENST00000334414 IGHV4OR15-8A0A075B7B6 117 aa4.16□□□□□ -1.74
PTPRB-202ENST00000334414 A0A087WW49 117 aa4.16□□□□□ -1.74
PTPRB-202ENST00000334414 ODF3BA8MYP8 253 aa4.16□□□□□ -1.74
PTPRB-202ENST00000334414 IGLV1-47P01700 117 aa4.16□□□□□ -1.74
PTPRB-202ENST00000334414 PDE4DIPQ5VU43 2346 aa4.16□□□□□ -1.74
PTPRB-202ENST00000334414 CHCHD10Q8WYQ3 142 aaPredicted RBP4.16□□□□□ -1.74
PTPRB-202ENST00000334414 IGKV1D-37A0A075B6S9 117 aa4.16□□□□□ -1.74
PTPRB-202ENST00000334414 DEFB112Q30KQ8 113 aa4.16□□□□□ -1.74
PTPRB-202ENST00000334414 CTSZQ9UBR2 303 aa4.16□□□□□ -1.74
PTPRB-202ENST00000334414 TP53TG3Q9ULZ0 132 aa4.16□□□□□ -1.74
PTPRB-202ENST00000334414 ZNF73O43830 326 aaPredicted RBP4.16□□□□□ -1.74
PTPRB-202ENST00000334414 C9orf85Q96MD7 179 aa4.16□□□□□ -1.74
PTPRB-202ENST00000334414 DOCK8Q8NF50 2099 aa4.16□□□□□ -1.74
PTPRB-202ENST00000334414 UBE2D1P51668 147 aa4.16□□□□□ -1.74
PTPRB-202ENST00000334414 EBI3Q14213 229 aa4.15□□□□□ -1.74
PTPRB-202ENST00000334414 Q8N9W7 124 aa4.15□□□□□ -1.74
PTPRB-202ENST00000334414 KLK5Q9Y337 293 aaPredicted RBP4.15□□□□□ -1.74
PTPRB-202ENST00000334414 FAM215AQ9Y5M1 114 aa4.15□□□□□ -1.74
PTPRB-202ENST00000334414 KNTC1P50748 2209 aa4.15□□□□□ -1.74
PTPRB-202ENST00000334414 Q8IZM0 81 aa4.15□□□□□ -1.74
PTPRB-202ENST00000334414 PLAC8L1A1L4L8 177 aa4.15□□□□□ -1.75
PTPRB-202ENST00000334414 PRB2P02812 416 aaPredicted RBP4.15□□□□□ -1.75
PTPRB-202ENST00000334414 GDF5OSQ5U4N7 250 aa4.15□□□□□ -1.75
PTPRB-202ENST00000334414 CD164L2Q6UWJ8 174 aa4.15□□□□□ -1.75
PTPRB-202ENST00000334414 FAM30AQ9NZY2 134 aa4.15□□□□□ -1.75
PTPRB-202ENST00000334414 A0A096LPF7 62 aa4.15□□□□□ -1.75
PTPRB-202ENST00000334414 IGFL2Q6UWQ7 119 aa4.15□□□□□ -1.75
PTPRB-202ENST00000334414 LINC00467Q9BRT7 94 aa4.15□□□□□ -1.75
PTPRB-202ENST00000334414 SIRPDQ9H106 197 aa4.15□□□□□ -1.75
PTPRB-202ENST00000334414 PRRC2BQ5JSZ5 2229 aaKnown RBP4.14□□□□□ -1.75
PTPRB-202ENST00000334414 PRB1P04280 392 aa4.14□□□□□ -1.75
PTPRB-202ENST00000334414 MAP6D1Q9H9H5 199 aa4.14□□□□□ -1.75
PTPRB-202ENST00000334414 F8W735 103 aaPredicted RBP4.14□□□□□ -1.75
PTPRB-202ENST00000334414 IGLV2-11P01706 119 aa4.14□□□□□ -1.75
PTPRB-202ENST00000334414 TRBV7-6A0A0J9YX20 115 aa4.14□□□□□ -1.75
PTPRB-202ENST00000334414 ZNF80P51504 273 aaPredicted RBP4.14□□□□□ -1.75
PTPRB-202ENST00000334414 ARTNQ5T4W7 220 aa4.14□□□□□ -1.75
PTPRB-202ENST00000334414 TMEM105Q8N8V8 129 aa4.14□□□□□ -1.75
PTPRB-202ENST00000334414 CDKN2A-AS1Q9UH64 79 aa4.14□□□□□ -1.75
PTPRB-202ENST00000334414 ESPL1Q14674 2120 aa4.14□□□□□ -1.75
PTPRB-202ENST00000334414 ATG2BQ96BY7 2078 aa4.14□□□□□ -1.75
PTPRB-202ENST00000334414 RNF223E7ERA6 249 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms