RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 PTH2Q96A98 100 aa9.13□□□□□ -0.95
VPS33B-201ENST00000333371 UBR5O95071 2799 aaPredicted RBP9.13□□□□□ -0.95
VPS33B-201ENST00000333371 HTN1P15515 57 aa9.12□□□□□ -0.95
VPS33B-201ENST00000333371 ZNF418Q8TF45 676 aaPredicted RBP9.12□□□□□ -0.95
VPS33B-201ENST00000333371 TRBV7-9A0A0J9YWB2 115 aa9.12□□□□□ -0.95
VPS33B-201ENST00000333371 SYNJ2BPP57105 145 aa9.12□□□□□ -0.95
VPS33B-201ENST00000333371 ZNF580Q9UK33 172 aa9.12□□□□□ -0.95
VPS33B-201ENST00000333371 PRRC2AP48634 2157 aaKnown RBP9.12□□□□□ -0.95
VPS33B-201ENST00000333371 IGHV3-73A0A0B4J1V6 119 aa9.12□□□□□ -0.95
VPS33B-201ENST00000333371 PSMB8P28062 276 aa9.12□□□□□ -0.95
VPS33B-201ENST00000333371 A0A096LNT2 108 aa9.11□□□□□ -0.95
VPS33B-201ENST00000333371 A0A0J9YX75 114 aa9.11□□□□□ -0.95
VPS33B-201ENST00000333371 TRBV27A0A0K0K1C4 114 aa9.11□□□□□ -0.95
VPS33B-201ENST00000333371 M0QY20 66 aa9.11□□□□□ -0.95
VPS33B-201ENST00000333371 BRI3O95415 125 aa9.11□□□□□ -0.95
VPS33B-201ENST00000333371 P0DMU3 169 aa9.11□□□□□ -0.95
VPS33B-201ENST00000333371 FAM231AP0DMU4 169 aa9.11□□□□□ -0.95
VPS33B-201ENST00000333371 FAM231CP0DMU5 169 aa9.11□□□□□ -0.95
VPS33B-201ENST00000333371 C9orf85Q96MD7 179 aa9.11□□□□□ -0.95
VPS33B-201ENST00000333371 LGALS9O00182 355 aa9.11□□□□□ -0.95
VPS33B-201ENST00000333371 KRTAP10-9P60411 292 aa9.11□□□□□ -0.95
VPS33B-201ENST00000333371 ZNF876PQ49A33 203 aa9.11□□□□□ -0.95
VPS33B-201ENST00000333371 CLUHP3Q96NS8 147 aa9.11□□□□□ -0.95
VPS33B-201ENST00000333371 SIGMAR1Q99720 223 aa9.11□□□□□ -0.95
VPS33B-201ENST00000333371 NAV2Q8IVL1 2488 aa9.1□□□□□ -0.95
VPS33B-201ENST00000333371 HERVK_113P61574 105 aa9.1□□□□□ -0.95
VPS33B-201ENST00000333371 HIST2H2BDQ6DRA6 164 aa9.1□□□□□ -0.95
VPS33B-201ENST00000333371 NDUFA11Q86Y39 141 aa9.1□□□□□ -0.95
VPS33B-201ENST00000333371 AMELXQ99217 191 aa9.1□□□□□ -0.95
VPS33B-201ENST00000333371 CHD6Q8TD26 2715 aa9.1□□□□□ -0.95
VPS33B-201ENST00000333371 A6NJY4 79 aa9.1□□□□□ -0.95
VPS33B-201ENST00000333371 K7EMT4 169 aa9.1□□□□□ -0.95
VPS33B-201ENST00000333371 CFC1BP0CG36 223 aa9.1□□□□□ -0.95
VPS33B-201ENST00000333371 CFC1P0CG37 223 aa9.1□□□□□ -0.95
VPS33B-201ENST00000333371 PROK1P58294 105 aa9.1□□□□□ -0.95
VPS33B-201ENST00000333371 NFE4Q86UQ8 179 aa9.1□□□□□ -0.95
VPS33B-201ENST00000333371 TIMM17AQ99595 171 aa9.1□□□□□ -0.95
VPS33B-201ENST00000333371 ZNF469Q96JG9 3925 aaPredicted RBP9.1□□□□□ -0.95
VPS33B-201ENST00000333371 IGHV3-30P01768 117 aa9.09□□□□□ -0.95
VPS33B-201ENST00000333371 IGHV3-30-5P0DP03 117 aa9.09□□□□□ -0.95
VPS33B-201ENST00000333371 RPL32P62910 135 aaKnown RBP9.09□□□□□ -0.95
VPS33B-201ENST00000333371 DEFB113Q30KQ7 82 aa9.09□□□□□ -0.95
VPS33B-201ENST00000333371 Q5PR19 223 aa9.09□□□□□ -0.95
VPS33B-201ENST00000333371 CFAP126Q5VTH2 177 aa9.09□□□□□ -0.95
VPS33B-201ENST00000333371 Q9UF83 564 aa9.09□□□□□ -0.95
VPS33B-201ENST00000333371 AKAP9Q99996 3911 aa9.09□□□□□ -0.95
VPS33B-201ENST00000333371 J3QQQ9 107 aa9.09□□□□□ -0.95
VPS33B-201ENST00000333371 RBMY1A1P0DJD3 496 aaKnown RBP9.09□□□□□ -0.95
VPS33B-201ENST00000333371 RBMY1CP0DJD4 496 aa9.09□□□□□ -0.95
VPS33B-201ENST00000333371 RBMY1FQ15415 496 aaKnown RBP9.09□□□□□ -0.95
VPS33B-201ENST00000333371 DLX4Q92988 240 aaPredicted RBP9.09□□□□□ -0.95
VPS33B-201ENST00000333371 TMEM141Q96I45 108 aa9.09□□□□□ -0.95
VPS33B-201ENST00000333371 BEX4Q9NWD9 120 aaPredicted RBP9.09□□□□□ -0.95
VPS33B-201ENST00000333371 NF1P21359 2839 aa9.09□□□□□ -0.95
VPS33B-201ENST00000333371 CR1P17927 2039 aa9.09□□□□□ -0.95
VPS33B-201ENST00000333371 SETD2Q9BYW2 2564 aaPredicted RBP9.09□□□□□ -0.95
VPS33B-201ENST00000333371 IGHV1OR15-1A0A075B7D0 117 aa9.08□□□□□ -0.96
VPS33B-201ENST00000333371 IGHV4-31P0DP07 118 aa9.08□□□□□ -0.96
VPS33B-201ENST00000333371 SONP18583 2426 aaKnown RBP9.08□□□□□ -0.96
VPS33B-201ENST00000333371 K7EQG2 157 aa9.08□□□□□ -0.96
VPS33B-201ENST00000333371 EIF4EBP3O60516 100 aaPredicted RBP9.08□□□□□ -0.96
VPS33B-201ENST00000333371 TCL1BO95988 128 aa9.08□□□□□ -0.96
VPS33B-201ENST00000333371 RNASE13Q5GAN3 156 aaKnown RBP9.08□□□□□ -0.96
VPS33B-201ENST00000333371 CEMP1Q6PRD7 247 aaPredicted RBP9.08□□□□□ -0.96
VPS33B-201ENST00000333371 A0A0J9YXV3 536 aa9.07□□□□□ -0.96
VPS33B-201ENST00000333371 ADARB2-AS1A8MUL3 147 aa9.07□□□□□ -0.96
VPS33B-201ENST00000333371 J3QR89 54 aa9.07□□□□□ -0.96
VPS33B-201ENST00000333371 SNRPD3P62318 126 aaKnown RBP9.07□□□□□ -0.96
VPS33B-201ENST00000333371 SLC25A29Q8N8R3 303 aa9.07□□□□□ -0.96
VPS33B-201ENST00000333371 TRBV6-5A0A0K0K1A5 114 aa9.07□□□□□ -0.96
VPS33B-201ENST00000333371 KNCNA6PVL3 124 aa9.07□□□□□ -0.96
VPS33B-201ENST00000333371 H7C2G1 150 aa9.07□□□□□ -0.96
VPS33B-201ENST00000333371 LGALS3P17931 250 aaKnown RBP9.07□□□□□ -0.96
VPS33B-201ENST00000333371 UBE2D3P61077 147 aa9.07□□□□□ -0.96
VPS33B-201ENST00000333371 UBE2D2P62837 147 aa9.07□□□□□ -0.96
VPS33B-201ENST00000333371 DEFB136Q30KP8 78 aa9.07□□□□□ -0.96
VPS33B-201ENST00000333371 PAPPA-AS1Q5QFB9 102 aa9.07□□□□□ -0.96
VPS33B-201ENST00000333371 C18orf65Q6ZTR6 163 aa9.07□□□□□ -0.96
VPS33B-201ENST00000333371 RAX2Q96IS3 184 aa9.07□□□□□ -0.96
VPS33B-201ENST00000333371 FOXI1Q12951 378 aa9.07□□□□□ -0.96
VPS33B-201ENST00000333371 FHL3Q13643 280 aa9.07□□□□□ -0.96
VPS33B-201ENST00000333371 SPATA25Q9BR10 227 aa9.07□□□□□ -0.96
VPS33B-201ENST00000333371 C2CD3Q4AC94 2353 aa9.06□□□□□ -0.96
VPS33B-201ENST00000333371 SYT8Q8NBV8 401 aa9.06□□□□□ -0.96
VPS33B-201ENST00000333371 Q96MF0 132 aa9.06□□□□□ -0.96
VPS33B-201ENST00000333371 VPREB3Q9UKI3 123 aa9.06□□□□□ -0.96
VPS33B-201ENST00000333371 NIPBLQ6KC79 2804 aaeCLIP9.06□□□□□ -0.96
VPS33B-201ENST00000333371 TRAV2A0A0B4J234 112 aa9.06□□□□□ -0.96
VPS33B-201ENST00000333371 C20orf203Q8NBC4 194 aa9.06□□□□□ -0.96
VPS33B-201ENST00000333371 A4D1N5 150 aa9.05□□□□□ -0.96
VPS33B-201ENST00000333371 ZNF22P17026 224 aaPredicted RBP9.05□□□□□ -0.96
VPS33B-201ENST00000333371 C1QTNF4Q9BXJ3 329 aa9.05□□□□□ -0.96
VPS33B-201ENST00000333371 IGLV4-3A0A075B6K6 122 aa9.05□□□□□ -0.96
VPS33B-201ENST00000333371 TMEM223A0PJW6 202 aa9.05□□□□□ -0.96
VPS33B-201ENST00000333371 HOXD3P31249 432 aaPredicted RBP9.05□□□□□ -0.96
VPS33B-201ENST00000333371 TRPT1Q86TN4 253 aaKnown RBP9.05□□□□□ -0.96
VPS33B-201ENST00000333371 LRRC75A-AS1Q8N1F1 130 aa9.05□□□□□ -0.96
VPS33B-201ENST00000333371 NSUN5P1Q3KNT7 163 aa9.04□□□□□ -0.96
VPS33B-201ENST00000333371 CARD19Q96LW7 228 aa9.04□□□□□ -0.96
VPS33B-201ENST00000333371 DUX3Q96PT4 197 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms