RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 A0A0J9YXY3 114 aa18.23■□□□□ 0.51
SOX1-201ENST00000330949 U3KQE9 123 aa18.23■□□□□ 0.51
SOX1-201ENST00000330949 FAM236AA0A1B0GUQ0 79 aa18.23■□□□□ 0.51
SOX1-201ENST00000330949 FAM236BA0A1B0GV22 79 aa18.23■□□□□ 0.51
SOX1-201ENST00000330949 ID1P41134 155 aa18.23■□□□□ 0.51
SOX1-201ENST00000330949 CDSNQ15517 529 aa18.23■□□□□ 0.51
SOX1-201ENST00000330949 PIEZO1Q92508 2521 aa18.23■□□□□ 0.51
SOX1-201ENST00000330949 TRBV27A0A0K0K1C4 114 aa18.22■□□□□ 0.51
SOX1-201ENST00000330949 SUMO4Q6EEV6 95 aa18.22■□□□□ 0.51
SOX1-201ENST00000330949 CCDC140Q96MF4 163 aa18.22■□□□□ 0.51
SOX1-201ENST00000330949 GNRH2O43555 120 aa18.22■□□□□ 0.51
SOX1-201ENST00000330949 ZNF22P17026 224 aaPredicted RBP18.22■□□□□ 0.51
SOX1-201ENST00000330949 IGHV3-64A0A075B6Q5 118 aa18.22■□□□□ 0.51
SOX1-201ENST00000330949 UBE2E1P51965 193 aa18.22■□□□□ 0.51
SOX1-201ENST00000330949 C20orf173Q96LM9 149 aa18.22■□□□□ 0.51
SOX1-201ENST00000330949 TRGV11A0A075B6L2 103 aa18.21■□□□□ 0.51
SOX1-201ENST00000330949 OVOL1O14753 267 aa18.21■□□□□ 0.51
SOX1-201ENST00000330949 ACYP1P07311 99 aa18.21■□□□□ 0.51
SOX1-201ENST00000330949 ECSCRQ19T08 205 aa18.21■□□□□ 0.51
SOX1-201ENST00000330949 KLK9Q2XQG4 91 aa18.2■□□□□ 0.5
SOX1-201ENST00000330949 KLK9Q9UKQ9 250 aa18.2■□□□□ 0.5
SOX1-201ENST00000330949 LST1O00453 97 aa18.2■□□□□ 0.5
SOX1-201ENST00000330949 RNASE4P34096 147 aaKnown RBP18.19■□□□□ 0.5
SOX1-201ENST00000330949 C9orf153Q5TBE3 101 aa18.19■□□□□ 0.5
SOX1-201ENST00000330949 MUC4Q99102 2169 aa18.19■□□□□ 0.5
SOX1-201ENST00000330949 EEF1AKMT3Q96AZ1 226 aa18.19■□□□□ 0.5
SOX1-201ENST00000330949 PRSS2P07478 247 aa18.18■□□□□ 0.5
SOX1-201ENST00000330949 F5H697 171 aa18.18■□□□□ 0.5
SOX1-201ENST00000330949 LINC00694P0DN24 101 aa18.18■□□□□ 0.5
SOX1-201ENST00000330949 M0R1W7 72 aa18.18■□□□□ 0.5
SOX1-201ENST00000330949 NDUFA7O95182 113 aa18.18■□□□□ 0.5
SOX1-201ENST00000330949 C3orf22Q8N5N4 141 aa18.18■□□□□ 0.5
SOX1-201ENST00000330949 TRBV6-5A0A0K0K1A5 114 aa18.17■□□□□ 0.5
SOX1-201ENST00000330949 OOSP1A8MZH6 123 aa18.17■□□□□ 0.5
SOX1-201ENST00000330949 CSDC2Q9Y534 153 aaKnown RBP18.17■□□□□ 0.5
SOX1-201ENST00000330949 TRBV7-1A0A0A6YYK4 115 aa18.16■□□□□ 0.5
SOX1-201ENST00000330949 RHOHQ15669 191 aa18.16■□□□□ 0.5
SOX1-201ENST00000330949 NSUN5P1Q3KNT7 163 aa18.16■□□□□ 0.5
SOX1-201ENST00000330949 Q8N9W7 124 aa18.16■□□□□ 0.5
SOX1-201ENST00000330949 CLEC2BQ92478 149 aa18.16■□□□□ 0.5
SOX1-201ENST00000330949 LITAFQ99732 161 aa18.16■□□□□ 0.5
SOX1-201ENST00000330949 UQCRQO14949 82 aa18.16■□□□□ 0.5
SOX1-201ENST00000330949 OPRPNQ99935 248 aaPredicted RBP18.16■□□□□ 0.5
SOX1-201ENST00000330949 ZNF256Q9Y2P7 627 aaPredicted RBP18.16■□□□□ 0.5
SOX1-201ENST00000330949 CCL21O00585 134 aa18.15■□□□□ 0.5
SOX1-201ENST00000330949 VMO1Q7Z5L0 202 aa18.15■□□□□ 0.5
SOX1-201ENST00000330949 APRG1Q8IVJ8 170 aa18.15■□□□□ 0.5
SOX1-201ENST00000330949 SPANXCQ9NY87 97 aa18.14■□□□□ 0.5
SOX1-201ENST00000330949 FAM19A4Q96LR4 140 aa18.14■□□□□ 0.49
SOX1-201ENST00000330949 ATP5G1P05496 136 aa18.13■□□□□ 0.49
SOX1-201ENST00000330949 IGHV3-30-3P0DP02 117 aa18.13■□□□□ 0.49
SOX1-201ENST00000330949 C5orf47Q569G3 176 aa18.13■□□□□ 0.49
SOX1-201ENST00000330949 A0A087WWL8 130 aa18.13■□□□□ 0.49
SOX1-201ENST00000330949 A0A0J9YXV3 536 aa18.13■□□□□ 0.49
SOX1-201ENST00000330949 JPT2Q9H910 190 aa18.13■□□□□ 0.49
SOX1-201ENST00000330949 ATP6V0E1O15342 81 aa18.12■□□□□ 0.49
SOX1-201ENST00000330949 TIMM21Q9BVV7 248 aa18.12■□□□□ 0.49
SOX1-201ENST00000330949 NPFFO15130 113 aa18.11■□□□□ 0.49
SOX1-201ENST00000330949 LINC00526Q96FQ7 95 aa18.11■□□□□ 0.49
SOX1-201ENST00000330949 ZNF580Q9UK33 172 aa18.11■□□□□ 0.49
SOX1-201ENST00000330949 I3L3M4 83 aa18.1■□□□□ 0.49
SOX1-201ENST00000330949 MINOS1Q5TGZ0 78 aa18.1■□□□□ 0.49
SOX1-201ENST00000330949 LINC00643Q86TS7 51 aa18.1■□□□□ 0.49
SOX1-201ENST00000330949 MINOS1-NBL1R4GNA1 71 aa18.1■□□□□ 0.49
SOX1-201ENST00000330949 MIAQ16674 131 aa18.09■□□□□ 0.49
SOX1-201ENST00000330949 CEMP1Q6PRD7 247 aaPredicted RBP18.09■□□□□ 0.49
SOX1-201ENST00000330949 LRRC75A-AS1Q8N1F1 130 aa18.09■□□□□ 0.49
SOX1-201ENST00000330949 TRAV8-3A0A0A6YYJ7 113 aa18.09■□□□□ 0.49
SOX1-201ENST00000330949 ADARB2-AS1A8MUL3 147 aa18.09■□□□□ 0.49
SOX1-201ENST00000330949 HERVK_113P63121 156 aa18.09■□□□□ 0.49
SOX1-201ENST00000330949 J3KT08 172 aa18.08■□□□□ 0.49
SOX1-201ENST00000330949 C20orf203Q8NBC4 194 aa18.08■□□□□ 0.49
SOX1-201ENST00000330949 SPXQ9BT56 116 aa18.08■□□□□ 0.49
SOX1-201ENST00000330949 PRRC2AP48634 2157 aaKnown RBP18.08■□□□□ 0.49
SOX1-201ENST00000330949 TMEM61Q8N0U2 210 aa18.08■□□□□ 0.48
SOX1-201ENST00000330949 DEFB1P60022 68 aa18.08■□□□□ 0.48
SOX1-201ENST00000330949 ADAMTSL4-AS1Q5T5F5 129 aa18.08■□□□□ 0.48
SOX1-201ENST00000330949 HIVEP3Q5T1R4 2406 aa18.07■□□□□ 0.48
SOX1-201ENST00000330949 SPG11Q96JI7 2443 aa18.07■□□□□ 0.48
SOX1-201ENST00000330949 SOCS3O14543 225 aa18.07■□□□□ 0.48
SOX1-201ENST00000330949 A0A1B0GX51 115 aa18.07■□□□□ 0.48
SOX1-201ENST00000330949 IGLV4-3A0A075B6K6 122 aa18.06■□□□□ 0.48
SOX1-201ENST00000330949 LINC00527Q9UJ94 153 aa18.06■□□□□ 0.48
SOX1-201ENST00000330949 G3V318 75 aa18.06■□□□□ 0.48
SOX1-201ENST00000330949 FAM74A4Q5TZK3 123 aa18.06■□□□□ 0.48
SOX1-201ENST00000330949 NDUFA12Q9UI09 145 aa18.05■□□□□ 0.48
SOX1-201ENST00000330949 Q6ZSV7 163 aa18.04■□□□□ 0.48
SOX1-201ENST00000330949 K7ENP7 123 aa18.04■□□□□ 0.48
SOX1-201ENST00000330949 NBL1P41271 181 aa18.04■□□□□ 0.48
SOX1-201ENST00000330949 LOC107984640A0A0U1RRK4 108 aa18.04■□□□□ 0.48
SOX1-201ENST00000330949 IGHV1-58A0A0C4DH39 117 aa18.03■□□□□ 0.48
SOX1-201ENST00000330949 F6UB75 175 aa18.03■□□□□ 0.48
SOX1-201ENST00000330949 M0QY20 66 aa18.03■□□□□ 0.48
SOX1-201ENST00000330949 ATP5J2P56134 94 aa18.03■□□□□ 0.48
SOX1-201ENST00000330949 DCANP1Q8TF63 244 aa18.03■□□□□ 0.48
SOX1-201ENST00000330949 SMIM9A6NGZ8 99 aa18.01■□□□□ 0.47
SOX1-201ENST00000330949 ZFP36P26651 326 aaKnown RBP18.01■□□□□ 0.47
SOX1-201ENST00000330949 CXCL5P42830 114 aa18.01■□□□□ 0.47
SOX1-201ENST00000330949 MRPS36P82909 103 aaKnown RBP18.01■□□□□ 0.47
SOX1-201ENST00000330949 SMCR5Q8TEV8 140 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms