RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 TAX1BP3O14907 124 aa7.8□□□□□ -1.16
CHD3-201ENST00000330494 Q6ZPA2 131 aa7.8□□□□□ -1.16
CHD3-201ENST00000330494 RMI2Q96E14 147 aa7.8□□□□□ -1.16
CHD3-201ENST00000330494 INAFM1C9JVW0 142 aa7.8□□□□□ -1.16
CHD3-201ENST00000330494 FANCD2OSQ96PS1 177 aa7.8□□□□□ -1.16
CHD3-201ENST00000330494 ICOSQ9Y6W8 199 aa7.8□□□□□ -1.16
CHD3-201ENST00000330494 ATOX1O00244 68 aa7.79□□□□□ -1.16
CHD3-201ENST00000330494 FOXI1Q12951 378 aa7.79□□□□□ -1.16
CHD3-201ENST00000330494 WFDC9Q8NEX5 89 aa7.79□□□□□ -1.16
CHD3-201ENST00000330494 TP53TG3Q9ULZ0 132 aa7.79□□□□□ -1.16
CHD3-201ENST00000330494 A6NDX4 124 aa7.79□□□□□ -1.16
CHD3-201ENST00000330494 P0DMU3 169 aa7.79□□□□□ -1.16
CHD3-201ENST00000330494 FAM231AP0DMU4 169 aa7.79□□□□□ -1.16
CHD3-201ENST00000330494 FAM231CP0DMU5 169 aa7.79□□□□□ -1.16
CHD3-201ENST00000330494 LMO4P61968 165 aa7.79□□□□□ -1.16
CHD3-201ENST00000330494 TMEM61Q8N0U2 210 aa7.79□□□□□ -1.16
CHD3-201ENST00000330494 TRAV4A0A0B4J268 109 aa7.79□□□□□ -1.16
CHD3-201ENST00000330494 IGHV4-31P0DP07 118 aa7.79□□□□□ -1.16
CHD3-201ENST00000330494 A0A0U1RQV1 116 aa7.78□□□□□ -1.16
CHD3-201ENST00000330494 ZFP2Q6ZN57 461 aa7.78□□□□□ -1.16
CHD3-201ENST00000330494 ZNF843Q8N446 348 aa7.78□□□□□ -1.16
CHD3-201ENST00000330494 A0A0J9YXV3 536 aa7.78□□□□□ -1.16
CHD3-201ENST00000330494 DNAH12Q6ZR08 3092 aa7.78□□□□□ -1.16
CHD3-201ENST00000330494 ACYP1P07311 99 aa7.78□□□□□ -1.16
CHD3-201ENST00000330494 C10orf99Q6UWK7 81 aa7.78□□□□□ -1.16
CHD3-201ENST00000330494 LRP4O75096 1905 aa7.78□□□□□ -1.16
CHD3-201ENST00000330494 TRAV13-2A0A0B4J235 113 aa7.78□□□□□ -1.16
CHD3-201ENST00000330494 FBXL19-AS1Q494R0 122 aa7.78□□□□□ -1.16
CHD3-201ENST00000330494 SLC25A29Q8N8R3 303 aa7.78□□□□□ -1.16
CHD3-201ENST00000330494 LENEPQ9Y5L5 61 aa7.78□□□□□ -1.16
CHD3-201ENST00000330494 PKIGQ9Y2B9 76 aa7.78□□□□□ -1.16
CHD3-201ENST00000330494 ATP5G1P05496 136 aa7.77□□□□□ -1.17
CHD3-201ENST00000330494 CCDC140Q96MF4 163 aa7.77□□□□□ -1.17
CHD3-201ENST00000330494 C9orf47Q6ZRZ4 202 aa7.77□□□□□ -1.17
CHD3-201ENST00000330494 A0A0B4J2C4 111 aa7.77□□□□□ -1.17
CHD3-201ENST00000330494 CAMK2N2Q96S95 79 aa7.77□□□□□ -1.17
CHD3-201ENST00000330494 TTTY13Q9BZ97 58 aa7.77□□□□□ -1.17
CHD3-201ENST00000330494 CCL18P55774 89 aa7.77□□□□□ -1.17
CHD3-201ENST00000330494 OPRPNQ99935 248 aaPredicted RBP7.77□□□□□ -1.17
CHD3-201ENST00000330494 FXYD2P54710 66 aa7.77□□□□□ -1.17
CHD3-201ENST00000330494 TEN1Q86WV5 123 aa7.77□□□□□ -1.17
CHD3-201ENST00000330494 IGHV4-28A0A0C4DH34 117 aa7.76□□□□□ -1.17
CHD3-201ENST00000330494 NCR3O14931 201 aa7.76□□□□□ -1.17
CHD3-201ENST00000330494 GPHB5Q86YW7 130 aa7.76□□□□□ -1.17
CHD3-201ENST00000330494 PIEZO2Q9H5I5 2752 aa7.76□□□□□ -1.17
CHD3-201ENST00000330494 CEMP1Q6PRD7 247 aaPredicted RBP7.76□□□□□ -1.17
CHD3-201ENST00000330494 ATG2AQ2TAZ0 1938 aa7.76□□□□□ -1.17
CHD3-201ENST00000330494 HIVEP2P31629 2446 aa7.76□□□□□ -1.17
CHD3-201ENST00000330494 IGKV1D-37A0A075B6S9 117 aa7.76□□□□□ -1.17
CHD3-201ENST00000330494 PSMB8P28062 276 aa7.76□□□□□ -1.17
CHD3-201ENST00000330494 ANKRD39Q53RE8 183 aa7.76□□□□□ -1.17
CHD3-201ENST00000330494 TRBV7-3A0A075B6L6 115 aa7.75□□□□□ -1.17
CHD3-201ENST00000330494 COX7A2LO14548 114 aa7.75□□□□□ -1.17
CHD3-201ENST00000330494 DAZ2Q13117 558 aaKnown RBP7.75□□□□□ -1.17
CHD3-201ENST00000330494 DAZ4Q86SG3 579 aaKnown RBP7.75□□□□□ -1.17
CHD3-201ENST00000330494 ZNF503Q96F45 646 aa7.75□□□□□ -1.17
CHD3-201ENST00000330494 DAZ3Q9NR90 486 aaKnown RBP7.75□□□□□ -1.17
CHD3-201ENST00000330494 BRWD1-AS2P59051 145 aa7.75□□□□□ -1.17
CHD3-201ENST00000330494 MAP6D1Q9H9H5 199 aa7.75□□□□□ -1.17
CHD3-201ENST00000330494 CPAMD8Q8IZJ3 1885 aa7.75□□□□□ -1.17
CHD3-201ENST00000330494 ORMDL1Q9P0S3 153 aa7.75□□□□□ -1.17
CHD3-201ENST00000330494 CRIP3Q6Q6R5 217 aa7.75□□□□□ -1.17
CHD3-201ENST00000330494 KLK12Q9UKR0 248 aa7.75□□□□□ -1.17
CHD3-201ENST00000330494 BAALCQ8WXS3 180 aa7.75□□□□□ -1.17
CHD3-201ENST00000330494 TIMM17AQ99595 171 aa7.75□□□□□ -1.17
CHD3-201ENST00000330494 ZNF80P51504 273 aaPredicted RBP7.74□□□□□ -1.17
CHD3-201ENST00000330494 FAM110AQ9BQ89 295 aa7.74□□□□□ -1.17
CHD3-201ENST00000330494 MYCNOSP40205 109 aa7.74□□□□□ -1.17
CHD3-201ENST00000330494 IGF1P05019 195 aa7.74□□□□□ -1.17
CHD3-201ENST00000330494 SPTSSBQ8NFR3 76 aa7.74□□□□□ -1.17
CHD3-201ENST00000330494 K7EMT4 169 aa7.74□□□□□ -1.17
CHD3-201ENST00000330494 CDSNQ15517 529 aa7.74□□□□□ -1.17
CHD3-201ENST00000330494 MPLKIPQ8TAP9 179 aa7.74□□□□□ -1.17
CHD3-201ENST00000330494 VSIG2Q96IQ7 327 aa7.74□□□□□ -1.17
CHD3-201ENST00000330494 ADAMTS20P59510 1910 aa7.74□□□□□ -1.17
CHD3-201ENST00000330494 MUSTN1Q8IVN3 82 aa7.74□□□□□ -1.17
CHD3-201ENST00000330494 PTH2Q96A98 100 aa7.74□□□□□ -1.17
CHD3-201ENST00000330494 SMAD5-AS1Q9Y6J3 95 aa7.74□□□□□ -1.17
CHD3-201ENST00000330494 ODF3BA8MYP8 253 aa7.73□□□□□ -1.17
CHD3-201ENST00000330494 COA6Q5JTJ3 125 aaKnown RBP7.73□□□□□ -1.17
CHD3-201ENST00000330494 MRPL55Q7Z7F7 128 aaKnown RBP7.73□□□□□ -1.17
CHD3-201ENST00000330494 EML5Q05BV3 1969 aa7.73□□□□□ -1.17
CHD3-201ENST00000330494 SONP18583 2426 aaKnown RBP7.73□□□□□ -1.17
CHD3-201ENST00000330494 LINC00322Q6ZN03 302 aaPredicted RBP7.73□□□□□ -1.17
CHD3-201ENST00000330494 LOXL1Q08397 574 aaPredicted RBP7.73□□□□□ -1.17
CHD3-201ENST00000330494 C20orf173Q96LM9 149 aa7.73□□□□□ -1.17
CHD3-201ENST00000330494 V9GYY9 64 aa7.73□□□□□ -1.17
CHD3-201ENST00000330494 EXPH5Q8NEV8 1989 aa7.73□□□□□ -1.17
CHD3-201ENST00000330494 TNFRSF13BO14836 293 aaPredicted RBP7.72□□□□□ -1.17
CHD3-201ENST00000330494 MT-ATP8P03928 68 aa7.72□□□□□ -1.17
CHD3-201ENST00000330494 CRYGBP07316 175 aa7.72□□□□□ -1.17
CHD3-201ENST00000330494 ANKHD1Q8IWZ3 2542 aaKnown RBP7.72□□□□□ -1.17
CHD3-201ENST00000330494 SORL1Q92673 2214 aa7.72□□□□□ -1.17
CHD3-201ENST00000330494 COX7B2Q8TF08 81 aa7.72□□□□□ -1.17
CHD3-201ENST00000330494 A0A0J9YX75 114 aa7.72□□□□□ -1.17
CHD3-201ENST00000330494 LINC00482Q8N8I6 264 aa7.72□□□□□ -1.17
CHD3-201ENST00000330494 ATRXP46100 2492 aa7.72□□□□□ -1.17
CHD3-201ENST00000330494 Q6YL49 198 aa7.72□□□□□ -1.17
CHD3-201ENST00000330494 RNF152Q8N8N0 203 aa7.72□□□□□ -1.17
CHD3-201ENST00000330494 TIRAPP58753 221 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms