RNA–Protein interactions for RNA: ENST00000330133.4

MRPL54-201, Transcript of mitochondrial ribosomal protein L54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL54, Length 626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-201ENST00000330133 SUMO4Q6EEV6 95 aa12.89□□□□□ -0.35
MRPL54-201ENST00000330133 HIGD1CA8MV81 97 aa12.88□□□□□ -0.35
MRPL54-201ENST00000330133 LINC01556Q5JQF7 62 aa12.88□□□□□ -0.35
MRPL54-201ENST00000330133 C10orf126Q8N4M7 172 aa12.88□□□□□ -0.35
MRPL54-201ENST00000330133 DNAJC30Q96LL9 226 aa12.88□□□□□ -0.35
MRPL54-201ENST00000330133 TNFRSF18Q9Y5U5 241 aa12.88□□□□□ -0.35
MRPL54-201ENST00000330133 A0A1B0GUT8 65 aa12.87□□□□□ -0.35
MRPL54-201ENST00000330133 M0QY20 66 aa12.87□□□□□ -0.35
MRPL54-201ENST00000330133 RASL11AQ6T310 242 aa12.86□□□□□ -0.35
MRPL54-201ENST00000330133 IGHV3-30P01768 117 aa12.85□□□□□ -0.35
MRPL54-201ENST00000330133 IGHV3-33P01772 117 aa12.85□□□□□ -0.35
MRPL54-201ENST00000330133 IGHV3-30-3P0DP02 117 aa12.85□□□□□ -0.35
MRPL54-201ENST00000330133 IGHV3-30-5P0DP03 117 aa12.85□□□□□ -0.35
MRPL54-201ENST00000330133 DAZ4Q86SG3 579 aaKnown RBP12.85□□□□□ -0.35
MRPL54-201ENST00000330133 DAZ3Q9NR90 486 aaKnown RBP12.85□□□□□ -0.35
MRPL54-201ENST00000330133 NAT8BQ9UHF3 227 aa12.85□□□□□ -0.35
MRPL54-201ENST00000330133 RIGQ13278 110 aa12.84□□□□□ -0.35
MRPL54-201ENST00000330133 NFE4Q86UQ8 179 aa12.84□□□□□ -0.35
MRPL54-201ENST00000330133 NUP35Q8NFH5 326 aa12.84□□□□□ -0.35
MRPL54-201ENST00000330133 NIT2Q9NQR4 276 aa12.84□□□□□ -0.35
MRPL54-201ENST00000330133 DNAH2Q9P225 4427 aa12.84□□□□□ -0.35
MRPL54-201ENST00000330133 TMEM97Q5BJF2 176 aa12.83□□□□□ -0.36
MRPL54-201ENST00000330133 TRBV6-8A0A0A6YYG3 113 aa12.82□□□□□ -0.36
MRPL54-201ENST00000330133 SMIM27A0A1W2PRY6 76 aa12.82□□□□□ -0.36
MRPL54-201ENST00000330133 TNP2Q05952 138 aa12.82□□□□□ -0.36
MRPL54-201ENST00000330133 PNRC1Q12796 327 aaPredicted RBP12.82□□□□□ -0.36
MRPL54-201ENST00000330133 UQCC3Q6UW78 93 aa12.82□□□□□ -0.36
MRPL54-201ENST00000330133 URGCP-MRPS24S4R325 110 aa12.82□□□□□ -0.36
MRPL54-201ENST00000330133 PPP1R2P9O14990 202 aa12.81□□□□□ -0.36
MRPL54-201ENST00000330133 KCNIP4Q6PIL6 250 aa12.81□□□□□ -0.36
MRPL54-201ENST00000330133 GATD1Q8NB37 220 aa12.81□□□□□ -0.36
MRPL54-201ENST00000330133 EPPK1P58107 5090 aaKnown RBP12.81□□□□□ -0.36
MRPL54-201ENST00000330133 DNAH17Q9UFH2 4485 aa12.81□□□□□ -0.36
MRPL54-201ENST00000330133 FRAS1Q86XX4 4008 aa12.8□□□□□ -0.36
MRPL54-201ENST00000330133 TRAV26-2A0A0B4J265 109 aa12.8□□□□□ -0.36
MRPL54-201ENST00000330133 IBA57-AS1B1ANH7 110 aa12.8□□□□□ -0.36
MRPL54-201ENST00000330133 FRZBQ92765 325 aa12.8□□□□□ -0.36
MRPL54-201ENST00000330133 TMEM191AQ9H0A3 160 aa12.8□□□□□ -0.36
MRPL54-201ENST00000330133 A0A1B0GVY2 172 aa12.79□□□□□ -0.36
MRPL54-201ENST00000330133 TMEM262E9PQX1 116 aa12.79□□□□□ -0.36
MRPL54-201ENST00000330133 NIT1Q86X76 327 aa12.79□□□□□ -0.36
MRPL54-201ENST00000330133 A0A087WX48 190 aa12.78□□□□□ -0.36
MRPL54-201ENST00000330133 COMMD7Q86VX2 200 aa12.78□□□□□ -0.36
MRPL54-201ENST00000330133 CHCHD5Q9BSY4 110 aa12.78□□□□□ -0.36
MRPL54-201ENST00000330133 TMEM218A2RU14 115 aa12.77□□□□□ -0.37
MRPL54-201ENST00000330133 MT-ND4LP03901 98 aa12.77□□□□□ -0.37
MRPL54-201ENST00000330133 PKIAP61925 76 aa12.77□□□□□ -0.37
MRPL54-201ENST00000330133 Q6ZRN7 208 aaPredicted RBP12.77□□□□□ -0.37
MRPL54-201ENST00000330133 NTM-AS1Q6ZSK4 140 aa12.77□□□□□ -0.37
MRPL54-201ENST00000330133 Q8N3U1 123 aa12.77□□□□□ -0.37
MRPL54-201ENST00000330133 CHCHD7Q9BUK0 85 aa12.77□□□□□ -0.37
MRPL54-201ENST00000330133 TRBV25-1A0A075B6N4 114 aa12.76□□□□□ -0.37
MRPL54-201ENST00000330133 IGHV1-24A0A0C4DH33 117 aa12.76□□□□□ -0.37
MRPL54-201ENST00000330133 A0A1B0GW15 77 aa12.76□□□□□ -0.37
MRPL54-201ENST00000330133 ELOBQ15370 118 aa12.76□□□□□ -0.37
MRPL54-201ENST00000330133 ANAPC16Q96DE5 110 aa12.76□□□□□ -0.37
MRPL54-201ENST00000330133 Q9HAA7 133 aa12.76□□□□□ -0.37
MRPL54-201ENST00000330133 F8W036 122 aa12.75□□□□□ -0.37
MRPL54-201ENST00000330133 RAB4AP20338 218 aa12.75□□□□□ -0.37
MRPL54-201ENST00000330133 LAGE3Q14657 143 aa12.75□□□□□ -0.37
MRPL54-201ENST00000330133 RPL39LQ96EH5 51 aaKnown RBP12.75□□□□□ -0.37
MRPL54-201ENST00000330133 FAT2Q9NYQ8 4349 aa12.74□□□□□ -0.37
MRPL54-201ENST00000330133 S100A8P05109 93 aa12.74□□□□□ -0.37
MRPL54-201ENST00000330133 CAMPP49913 170 aa12.74□□□□□ -0.37
MRPL54-201ENST00000330133 COTL1Q14019 142 aa12.74□□□□□ -0.37
MRPL54-201ENST00000330133 IQCJQ1A5X6 159 aa12.74□□□□□ -0.37
MRPL54-201ENST00000330133 AMN1Q8IY45 258 aa12.74□□□□□ -0.37
MRPL54-201ENST00000330133 MRAP2Q96G30 205 aa12.74□□□□□ -0.37
MRPL54-201ENST00000330133 RNF185Q96GF1 192 aa12.74□□□□□ -0.37
MRPL54-201ENST00000330133 TRAV8-3A0A0A6YYJ7 113 aa12.73□□□□□ -0.37
MRPL54-201ENST00000330133 LINC00862A6NCI5 91 aa12.73□□□□□ -0.37
MRPL54-201ENST00000330133 PSCAO43653 123 aa12.73□□□□□ -0.37
MRPL54-201ENST00000330133 MRPL54Q6P161 138 aaKnown RBP12.73□□□□□ -0.37
MRPL54-201ENST00000330133 EREGO14944 169 aa12.72□□□□□ -0.37
MRPL54-201ENST00000330133 GAGE6Q13070 117 aa12.72□□□□□ -0.37
MRPL54-201ENST00000330133 TMEM243Q9BU79 118 aa12.72□□□□□ -0.37
MRPL54-201ENST00000330133 TM2D2Q9BX73 214 aa12.72□□□□□ -0.37
MRPL54-201ENST00000330133 KLK12Q9UKR0 248 aa12.72□□□□□ -0.37
MRPL54-201ENST00000330133 BIRC6Q9NR09 4857 aa12.71□□□□□ -0.37
MRPL54-201ENST00000330133 TRBV6-5A0A0K0K1A5 114 aa12.71□□□□□ -0.37
MRPL54-201ENST00000330133 ADCYAP1P18509 176 aa12.71□□□□□ -0.37
MRPL54-201ENST00000330133 HBBP68871 147 aa12.71□□□□□ -0.37
MRPL54-201ENST00000330133 FAM104BQ5XKR9 115 aa12.71□□□□□ -0.37
MRPL54-201ENST00000330133 SEC11CQ9BY50 192 aa12.71□□□□□ -0.37
MRPL54-201ENST00000330133 ST20Q9HBF5 79 aa12.71□□□□□ -0.37
MRPL54-201ENST00000330133 SDHAF1A6NFY7 115 aa12.7□□□□□ -0.38
MRPL54-201ENST00000330133 PMCHP20382 165 aa12.7□□□□□ -0.38
MRPL54-201ENST00000330133 AMTP48728 403 aa12.7□□□□□ -0.38
MRPL54-201ENST00000330133 MPV17L2Q567V2 206 aa12.7□□□□□ -0.38
MRPL54-201ENST00000330133 ATRAIDQ6UW56 229 aa12.7□□□□□ -0.38
MRPL54-201ENST00000330133 DEFB104AQ8WTQ1 72 aa12.7□□□□□ -0.38
MRPL54-201ENST00000330133 GAS8-AS1O95177 125 aa12.69□□□□□ -0.38
MRPL54-201ENST00000330133 NCR2O95944 276 aa12.69□□□□□ -0.38
MRPL54-201ENST00000330133 PPP1R17O96001 155 aa12.69□□□□□ -0.38
MRPL54-201ENST00000330133 ATP5L2Q7Z4Y8 100 aa12.69□□□□□ -0.38
MRPL54-201ENST00000330133 UBE2WQ96B02 151 aa12.69□□□□□ -0.38
MRPL54-201ENST00000330133 RMI2Q96E14 147 aa12.69□□□□□ -0.38
MRPL54-201ENST00000330133 A0A1B0GXF2 115 aa12.68□□□□□ -0.38
MRPL54-201ENST00000330133 SMKR1H3BMG3 65 aa12.68□□□□□ -0.38
MRPL54-201ENST00000330133 I3L3M4 83 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms