RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 FHL2Q14192 279 aa7.24□□□□□ -1.25
VIPAS39-201ENST00000327028 C18orf32Q8TCD1 76 aa7.24□□□□□ -1.25
VIPAS39-201ENST00000327028 TRGV4A0A0C4DH28 118 aa7.24□□□□□ -1.25
VIPAS39-201ENST00000327028 K7EQD1 137 aa7.24□□□□□ -1.25
VIPAS39-201ENST00000327028 C12orf74Q32Q52 190 aa7.24□□□□□ -1.25
VIPAS39-201ENST00000327028 OR10J3Q5JRS4 329 aa7.24□□□□□ -1.25
VIPAS39-201ENST00000327028 RPL39LQ96EH5 51 aaKnown RBP7.23□□□□□ -1.25
VIPAS39-201ENST00000327028 TRBV6-5A0A0K0K1A5 114 aa7.23□□□□□ -1.25
VIPAS39-201ENST00000327028 TRBV6-4A0A1B0GX49 114 aa7.23□□□□□ -1.25
VIPAS39-201ENST00000327028 HOXA5P20719 270 aa7.23□□□□□ -1.25
VIPAS39-201ENST00000327028 Q0VG73 95 aa7.23□□□□□ -1.25
VIPAS39-201ENST00000327028 C11orf45Q8TAV5 145 aa7.23□□□□□ -1.25
VIPAS39-201ENST00000327028 STAB2Q8WWQ8 2551 aa7.22□□□□□ -1.25
VIPAS39-201ENST00000327028 IQCJQ1A5X6 159 aa7.22□□□□□ -1.25
VIPAS39-201ENST00000327028 SLC25A29Q8N8R3 303 aa7.22□□□□□ -1.25
VIPAS39-201ENST00000327028 C20orf78Q9BR46 151 aa7.22□□□□□ -1.25
VIPAS39-201ENST00000327028 MAP1LC3AQ9H492 121 aa7.22□□□□□ -1.25
VIPAS39-201ENST00000327028 NIT2Q9NQR4 276 aa7.22□□□□□ -1.25
VIPAS39-201ENST00000327028 COL7A1Q02388 2944 aa7.22□□□□□ -1.25
VIPAS39-201ENST00000327028 TRBV10-1A0A0K0K1A3 114 aa7.22□□□□□ -1.25
VIPAS39-201ENST00000327028 PRSS47A8MTI9 375 aa7.22□□□□□ -1.25
VIPAS39-201ENST00000327028 P0DMU3 169 aa7.22□□□□□ -1.25
VIPAS39-201ENST00000327028 FAM231AP0DMU4 169 aa7.22□□□□□ -1.25
VIPAS39-201ENST00000327028 FAM231CP0DMU5 169 aa7.22□□□□□ -1.25
VIPAS39-201ENST00000327028 RHOHQ15669 191 aa7.22□□□□□ -1.25
VIPAS39-201ENST00000327028 DNAJC30Q96LL9 226 aa7.22□□□□□ -1.25
VIPAS39-201ENST00000327028 SUMO2P61956 95 aaKnown RBP7.21□□□□□ -1.25
VIPAS39-201ENST00000327028 NEXN-AS1Q8NBZ9 246 aa7.21□□□□□ -1.25
VIPAS39-201ENST00000327028 ST20Q9HBF5 79 aa7.21□□□□□ -1.25
VIPAS39-201ENST00000327028 CRYBA4P53673 196 aa7.21□□□□□ -1.26
VIPAS39-201ENST00000327028 NANOS2P60321 138 aaKnown RBP7.21□□□□□ -1.26
VIPAS39-201ENST00000327028 RPL32P62910 135 aaKnown RBP7.21□□□□□ -1.26
VIPAS39-201ENST00000327028 ANKRD39Q53RE8 183 aa7.21□□□□□ -1.26
VIPAS39-201ENST00000327028 Q6ZTC4 211 aa7.21□□□□□ -1.26
VIPAS39-201ENST00000327028 PRO0255Q9UI72 69 aa7.21□□□□□ -1.26
VIPAS39-201ENST00000327028 HHLA3Q9XRX5 114 aa7.21□□□□□ -1.26
VIPAS39-201ENST00000327028 FBN3Q75N90 2809 aa7.2□□□□□ -1.26
VIPAS39-201ENST00000327028 COA6Q5JTJ3 125 aaKnown RBP7.2□□□□□ -1.26
VIPAS39-201ENST00000327028 BAGE3Q86Y29 109 aa7.2□□□□□ -1.26
VIPAS39-201ENST00000327028 PRADC1Q9BSG0 188 aa7.2□□□□□ -1.26
VIPAS39-201ENST00000327028 SMIM2Q9BVW6 85 aa7.2□□□□□ -1.26
VIPAS39-201ENST00000327028 LOC389332A0A1B0GUA5 103 aa7.2□□□□□ -1.26
VIPAS39-201ENST00000327028 F5H768 121 aa7.2□□□□□ -1.26
VIPAS39-201ENST00000327028 PMCHP20382 165 aa7.2□□□□□ -1.26
VIPAS39-201ENST00000327028 TMEM70Q9BUB7 260 aa7.2□□□□□ -1.26
VIPAS39-201ENST00000327028 TNFRSF18Q9Y5U5 241 aa7.2□□□□□ -1.26
VIPAS39-201ENST00000327028 SDHAF1A6NFY7 115 aa7.19□□□□□ -1.26
VIPAS39-201ENST00000327028 HTN3P15516 51 aa7.19□□□□□ -1.26
VIPAS39-201ENST00000327028 PCP4P48539 62 aa7.19□□□□□ -1.26
VIPAS39-201ENST00000327028 NDUFA6P56556 154 aa7.19□□□□□ -1.26
VIPAS39-201ENST00000327028 RPL36AP83881 106 aaKnown RBP7.19□□□□□ -1.26
VIPAS39-201ENST00000327028 Q8N8P6 123 aa7.19□□□□□ -1.26
VIPAS39-201ENST00000327028 RPL36ALQ969Q0 106 aaKnown RBP7.19□□□□□ -1.26
VIPAS39-201ENST00000327028 NXT2Q9NPJ8 142 aaKnown RBP7.19□□□□□ -1.26
VIPAS39-201ENST00000327028 Q9UF83 564 aa7.19□□□□□ -1.26
VIPAS39-201ENST00000327028 IGLV2-18A0A075B6J9 118 aa7.19□□□□□ -1.26
VIPAS39-201ENST00000327028 A0A1B0GV90 55 aa7.19□□□□□ -1.26
VIPAS39-201ENST00000327028 IFI27P40305 119 aaPredicted RBP7.19□□□□□ -1.26
VIPAS39-201ENST00000327028 POLR2KP53803 58 aaKnown RBP7.19□□□□□ -1.26
VIPAS39-201ENST00000327028 PRSS3P2Q8NHM4 247 aa7.19□□□□□ -1.26
VIPAS39-201ENST00000327028 URB1-AS1Q96HZ7 61 aa7.19□□□□□ -1.26
VIPAS39-201ENST00000327028 TRBV7-3A0A075B6L6 115 aa7.18□□□□□ -1.26
VIPAS39-201ENST00000327028 PAX4O43316 350 aa7.18□□□□□ -1.26
VIPAS39-201ENST00000327028 SERF1AO75920 110 aa7.18□□□□□ -1.26
VIPAS39-201ENST00000327028 LINC00694P0DN24 101 aa7.18□□□□□ -1.26
VIPAS39-201ENST00000327028 LINC00310P59036 64 aa7.18□□□□□ -1.26
VIPAS39-201ENST00000327028 FA2HQ7L5A8 372 aa7.18□□□□□ -1.26
VIPAS39-201ENST00000327028 NIT1Q86X76 327 aa7.18□□□□□ -1.26
VIPAS39-201ENST00000327028 TRBV27A0A0K0K1C4 114 aa7.18□□□□□ -1.26
VIPAS39-201ENST00000327028 LOC100131303A0A0U1RQF7 123 aa7.18□□□□□ -1.26
VIPAS39-201ENST00000327028 LINC01546A6NGU7 62 aa7.18□□□□□ -1.26
VIPAS39-201ENST00000327028 VCYO14598 125 aa7.18□□□□□ -1.26
VIPAS39-201ENST00000327028 ZNRF2Q8NHG8 242 aa7.18□□□□□ -1.26
VIPAS39-201ENST00000327028 VSIG2Q96IQ7 327 aa7.18□□□□□ -1.26
VIPAS39-201ENST00000327028 TRAV26-1A0A087WT03 109 aa7.17□□□□□ -1.26
VIPAS39-201ENST00000327028 GAGE12JA6NER3 117 aa7.17□□□□□ -1.26
VIPAS39-201ENST00000327028 UBE2D3P61077 147 aa7.17□□□□□ -1.26
VIPAS39-201ENST00000327028 UBE2D2P62837 147 aa7.17□□□□□ -1.26
VIPAS39-201ENST00000327028 GAGE1Q13065 139 aa7.17□□□□□ -1.26
VIPAS39-201ENST00000327028 GAGE4Q13068 117 aa7.17□□□□□ -1.26
VIPAS39-201ENST00000327028 GAGE5Q13069 117 aa7.17□□□□□ -1.26
VIPAS39-201ENST00000327028 GAGE13Q4V321 117 aa7.17□□□□□ -1.26
VIPAS39-201ENST00000327028 RNASEKQ6P5S7 137 aaKnown RBP7.17□□□□□ -1.26
VIPAS39-201ENST00000327028 CHCHD1Q96BP2 118 aaKnown RBP7.17□□□□□ -1.26
VIPAS39-201ENST00000327028 TRAV10A0A0B4J240 114 aa7.17□□□□□ -1.26
VIPAS39-201ENST00000327028 LINC00614P0C842 121 aa7.17□□□□□ -1.26
VIPAS39-201ENST00000327028 SMIM6P0DI80 62 aa7.17□□□□□ -1.26
VIPAS39-201ENST00000327028 ESDP10768 282 aa7.17□□□□□ -1.26
VIPAS39-201ENST00000327028 GYPEP15421 78 aa7.17□□□□□ -1.26
VIPAS39-201ENST00000327028 NEGR1Q7Z3B1 354 aa7.17□□□□□ -1.26
VIPAS39-201ENST00000327028 DEFB131BA0A096LNP1 70 aa7.16□□□□□ -1.26
VIPAS39-201ENST00000327028 A0A0J9YY99 117 aa7.16□□□□□ -1.26
VIPAS39-201ENST00000327028 I3L3M4 83 aa7.16□□□□□ -1.26
VIPAS39-201ENST00000327028 K7EMI3 77 aa7.16□□□□□ -1.26
VIPAS39-201ENST00000327028 AP5S1Q9NUS5 200 aa7.16□□□□□ -1.26
VIPAS39-201ENST00000327028 H3BNG1 76 aa7.16□□□□□ -1.26
VIPAS39-201ENST00000327028 DAZ4Q86SG3 579 aaKnown RBP7.16□□□□□ -1.26
VIPAS39-201ENST00000327028 KIR2DL4Q99706 377 aa7.16□□□□□ -1.26
VIPAS39-201ENST00000327028 DAZ3Q9NR90 486 aaKnown RBP7.16□□□□□ -1.26
VIPAS39-201ENST00000327028 C5orf52A6NGY3 159 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms