RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 TMEM262E9PQX1 116 aa10.67□□□□□ -0.7
CHRNA3-201ENST00000326828 PPP1R17O96001 155 aa10.67□□□□□ -0.7
CHRNA3-201ENST00000326828 ZNF876PQ49A33 203 aa10.67□□□□□ -0.7
CHRNA3-201ENST00000326828 DAND5Q8N907 189 aa10.67□□□□□ -0.7
CHRNA3-201ENST00000326828 P0DMU3 169 aa10.67□□□□□ -0.7
CHRNA3-201ENST00000326828 FAM231AP0DMU4 169 aa10.67□□□□□ -0.7
CHRNA3-201ENST00000326828 FAM231CP0DMU5 169 aa10.67□□□□□ -0.7
CHRNA3-201ENST00000326828 AMELXQ99217 191 aa10.67□□□□□ -0.7
CHRNA3-201ENST00000326828 KIF25-AS1Q9Y6Z4 181 aa10.67□□□□□ -0.7
CHRNA3-201ENST00000326828 SVIPQ8NHG7 77 aa10.66□□□□□ -0.7
CHRNA3-201ENST00000326828 VCX2Q9H322 139 aa10.66□□□□□ -0.7
CHRNA3-201ENST00000326828 PRM2P04554 102 aa10.66□□□□□ -0.7
CHRNA3-201ENST00000326828 BLCAPP62952 87 aa10.66□□□□□ -0.7
CHRNA3-201ENST00000326828 CLEC2BQ92478 149 aa10.66□□□□□ -0.7
CHRNA3-201ENST00000326828 LENEPQ9Y5L5 61 aa10.66□□□□□ -0.7
CHRNA3-201ENST00000326828 LINC01620Q4KN68 170 aa10.65□□□□□ -0.7
CHRNA3-201ENST00000326828 TRAV8-4A0A0B4J246 113 aa10.65□□□□□ -0.7
CHRNA3-201ENST00000326828 TRIAP1O43715 76 aa10.65□□□□□ -0.7
CHRNA3-201ENST00000326828 NHLRC4P0CG21 123 aaPredicted RBP10.65□□□□□ -0.7
CHRNA3-201ENST00000326828 SPINK13Q1W4C9 94 aa10.65□□□□□ -0.7
CHRNA3-201ENST00000326828 TMEM95Q3KNT9 176 aa10.65□□□□□ -0.7
CHRNA3-201ENST00000326828 C15orf53Q8NAA6 179 aa10.65□□□□□ -0.7
CHRNA3-201ENST00000326828 TMEM263Q8WUH6 116 aaKnown RBP10.65□□□□□ -0.7
CHRNA3-201ENST00000326828 TMEM141Q96I45 108 aa10.65□□□□□ -0.7
CHRNA3-201ENST00000326828 SETD2Q9BYW2 2564 aaPredicted RBP10.65□□□□□ -0.71
CHRNA3-201ENST00000326828 IGHV1-69DA0A0B4J2H0 117 aa10.65□□□□□ -0.71
CHRNA3-201ENST00000326828 KNCNA6PVL3 124 aa10.65□□□□□ -0.71
CHRNA3-201ENST00000326828 ZNF22P17026 224 aaPredicted RBP10.64□□□□□ -0.71
CHRNA3-201ENST00000326828 NDUFV3P56181 108 aaKnown RBP10.64□□□□□ -0.71
CHRNA3-201ENST00000326828 DUX3Q96PT4 197 aa10.64□□□□□ -0.71
CHRNA3-201ENST00000326828 MYO9AB2RTY4 2548 aa10.64□□□□□ -0.71
CHRNA3-201ENST00000326828 SOCS3O14543 225 aa10.64□□□□□ -0.71
CHRNA3-201ENST00000326828 C2orf82Q6UX34 121 aa10.64□□□□□ -0.71
CHRNA3-201ENST00000326828 ATXN8Q156A1 80 aa10.63□□□□□ -0.71
CHRNA3-201ENST00000326828 TIMM17AQ99595 171 aa10.63□□□□□ -0.71
CHRNA3-201ENST00000326828 RHODO00212 210 aa10.63□□□□□ -0.71
CHRNA3-201ENST00000326828 PROK1P58294 105 aa10.63□□□□□ -0.71
CHRNA3-201ENST00000326828 DUX5Q96PT3 197 aa10.63□□□□□ -0.71
CHRNA3-201ENST00000326828 MOB4Q9Y3A3 225 aa10.63□□□□□ -0.71
CHRNA3-201ENST00000326828 POLQO75417 2590 aa10.63□□□□□ -0.71
CHRNA3-201ENST00000326828 TMEM223A0PJW6 202 aa10.63□□□□□ -0.71
CHRNA3-201ENST00000326828 CD28P10747 220 aa10.63□□□□□ -0.71
CHRNA3-201ENST00000326828 ADORA2A-AS1P86434 159 aa10.63□□□□□ -0.71
CHRNA3-201ENST00000326828 C11orf71Q6IPW1 123 aa10.63□□□□□ -0.71
CHRNA3-201ENST00000326828 SMIM20Q8N5G0 67 aa10.62□□□□□ -0.71
CHRNA3-201ENST00000326828 NDUFA4O00483 81 aa10.62□□□□□ -0.71
CHRNA3-201ENST00000326828 LEPROTO15243 131 aa10.62□□□□□ -0.71
CHRNA3-201ENST00000326828 SBSPONQ8IVN8 264 aa10.62□□□□□ -0.71
CHRNA3-201ENST00000326828 ZANQ9Y493 2812 aa10.62□□□□□ -0.71
CHRNA3-201ENST00000326828 A0A0J9YXY3 114 aa10.62□□□□□ -0.71
CHRNA3-201ENST00000326828 IFITM1P13164 125 aa10.62□□□□□ -0.71
CHRNA3-201ENST00000326828 ZNF625Q96I27 306 aaPredicted RBP10.62□□□□□ -0.71
CHRNA3-201ENST00000326828 CITED1Q99966 193 aa10.62□□□□□ -0.71
CHRNA3-201ENST00000326828 CACNA1AO00555 2505 aa10.61□□□□□ -0.71
CHRNA3-201ENST00000326828 ABCA2Q9BZC7 2435 aa10.61□□□□□ -0.71
CHRNA3-201ENST00000326828 IGHV4OR15-8A0A075B7B6 117 aa10.61□□□□□ -0.71
CHRNA3-201ENST00000326828 A0A087WW49 117 aa10.61□□□□□ -0.71
CHRNA3-201ENST00000326828 H3BUX3 64 aa10.61□□□□□ -0.71
CHRNA3-201ENST00000326828 IGHV3-30-3P0DP02 117 aa10.61□□□□□ -0.71
CHRNA3-201ENST00000326828 ADAMTSL4-AS1Q5T5F5 129 aa10.61□□□□□ -0.71
CHRNA3-201ENST00000326828 TIMM21Q9BVV7 248 aa10.61□□□□□ -0.71
CHRNA3-201ENST00000326828 Q9UF83 564 aa10.61□□□□□ -0.71
CHRNA3-201ENST00000326828 FAM223BA6NKX1 122 aa10.61□□□□□ -0.71
CHRNA3-201ENST00000326828 H3BMM0 161 aa10.61□□□□□ -0.71
CHRNA3-201ENST00000326828 FAM223AQ8IWN6 122 aa10.61□□□□□ -0.71
CHRNA3-201ENST00000326828 UBE2WQ96B02 151 aa10.61□□□□□ -0.71
CHRNA3-201ENST00000326828 GAGE12JA6NER3 117 aa10.6□□□□□ -0.71
CHRNA3-201ENST00000326828 GAGE7O76087 117 aa10.6□□□□□ -0.71
CHRNA3-201ENST00000326828 GAGE12FP0CL80 117 aa10.6□□□□□ -0.71
CHRNA3-201ENST00000326828 GAGE12GP0CL81 117 aa10.6□□□□□ -0.71
CHRNA3-201ENST00000326828 GAGE12IP0CL82 117 aa10.6□□□□□ -0.71
CHRNA3-201ENST00000326828 GAGE4Q13068 117 aa10.6□□□□□ -0.71
CHRNA3-201ENST00000326828 TRBV27A0A0K0K1C4 114 aa10.6□□□□□ -0.71
CHRNA3-201ENST00000326828 M0QY20 66 aa10.6□□□□□ -0.71
CHRNA3-201ENST00000326828 WNK1Q9H4A3 2382 aa10.6□□□□□ -0.71
CHRNA3-201ENST00000326828 C10orf99Q6UWK7 81 aa10.59□□□□□ -0.71
CHRNA3-201ENST00000326828 DAZ1Q9NQZ3 744 aaKnown RBP10.59□□□□□ -0.71
CHRNA3-201ENST00000326828 ZFYVE26Q68DK2 2539 aa10.59□□□□□ -0.71
CHRNA3-201ENST00000326828 IGLV4-3A0A075B6K6 122 aa10.59□□□□□ -0.71
CHRNA3-201ENST00000326828 IGHV3-38A0A0C4DH36 116 aa10.59□□□□□ -0.71
CHRNA3-201ENST00000326828 IGHV4-38-2P0DP08 117 aa10.59□□□□□ -0.71
CHRNA3-201ENST00000326828 ODF3Q96PU9 254 aa10.59□□□□□ -0.71
CHRNA3-201ENST00000326828 USP9XQ93008 2570 aaPredicted RBP10.59□□□□□ -0.71
CHRNA3-201ENST00000326828 LMO4P61968 165 aa10.58□□□□□ -0.72
CHRNA3-201ENST00000326828 C20orf203Q8NBC4 194 aa10.58□□□□□ -0.72
CHRNA3-201ENST00000326828 M0R2P5 195 aa10.58□□□□□ -0.72
CHRNA3-201ENST00000326828 NDUFA12Q9UI09 145 aa10.58□□□□□ -0.72
CHRNA3-201ENST00000326828 TLN2Q9Y4G6 2542 aa10.58□□□□□ -0.72
CHRNA3-201ENST00000326828 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.58□□□□□ -0.72
CHRNA3-201ENST00000326828 CHCHD5Q9BSY4 110 aa10.58□□□□□ -0.72
CHRNA3-201ENST00000326828 KLLNB2CW77 178 aa10.57□□□□□ -0.72
CHRNA3-201ENST00000326828 FAM19A4Q96LR4 140 aa10.57□□□□□ -0.72
CHRNA3-201ENST00000326828 ICOSQ9Y6W8 199 aa10.57□□□□□ -0.72
CHRNA3-201ENST00000326828 UTP20O75691 2785 aaKnown RBP10.57□□□□□ -0.72
CHRNA3-201ENST00000326828 IGHV3-16A0A0C4DH30 117 aa10.57□□□□□ -0.72
CHRNA3-201ENST00000326828 MED14OSP0DP75 135 aa10.57□□□□□ -0.72
CHRNA3-201ENST00000326828 ID1P41134 155 aa10.57□□□□□ -0.72
CHRNA3-201ENST00000326828 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.56□□□□□ -0.72
CHRNA3-201ENST00000326828 A0A0B4J2C4 111 aa10.56□□□□□ -0.72
CHRNA3-201ENST00000326828 TRBV10-2A0A0K0K1G8 114 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms