RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 IGKV2-29A2NJV5 120 aaPredicted RBP8.97□□□□□ -0.97
DDR1-223ENST00000324771 H3BRM9 83 aa8.97□□□□□ -0.97
DDR1-223ENST00000324771 A0A087WX48 190 aa8.96□□□□□ -0.97
DDR1-223ENST00000324771 DEFB4AO15263 64 aa8.96□□□□□ -0.97
DDR1-223ENST00000324771 FSTL3O95633 263 aa8.96□□□□□ -0.97
DDR1-223ENST00000324771 FOXI2Q6ZQN5 318 aa8.96□□□□□ -0.97
DDR1-223ENST00000324771 GPHB5Q86YW7 130 aa8.96□□□□□ -0.97
DDR1-223ENST00000324771 SMIM20Q8N5G0 67 aa8.96□□□□□ -0.97
DDR1-223ENST00000324771 MRPL53Q96EL3 112 aaKnown RBP8.96□□□□□ -0.97
DDR1-223ENST00000324771 CHD6Q8TD26 2715 aa8.96□□□□□ -0.97
DDR1-223ENST00000324771 MRGPRG-AS1Q2M3A8 158 aa8.96□□□□□ -0.98
DDR1-223ENST00000324771 DEFB125Q8N687 156 aa8.96□□□□□ -0.98
DDR1-223ENST00000324771 LGALS9BQ3B8N2 356 aa8.96□□□□□ -0.98
DDR1-223ENST00000324771 LGALS9CQ6DKI2 356 aa8.96□□□□□ -0.98
DDR1-223ENST00000324771 SUMO4Q6EEV6 95 aa8.96□□□□□ -0.98
DDR1-223ENST00000324771 C3orf56Q8N813 242 aa8.96□□□□□ -0.98
DDR1-223ENST00000324771 DNAJC9-AS1A6NH13 148 aa8.95□□□□□ -0.98
DDR1-223ENST00000324771 SNCGO76070 127 aa8.95□□□□□ -0.98
DDR1-223ENST00000324771 IGHG4P01861 327 aa8.95□□□□□ -0.98
DDR1-223ENST00000324771 OPRPNQ99935 248 aaPredicted RBP8.95□□□□□ -0.98
DDR1-223ENST00000324771 C11orf21Q9P2W6 132 aa8.95□□□□□ -0.98
DDR1-223ENST00000324771 COX8AP10176 69 aa8.95□□□□□ -0.98
DDR1-223ENST00000324771 CLPSL2Q6UWE3 100 aa8.95□□□□□ -0.98
DDR1-223ENST00000324771 SMR3AQ99954 134 aa8.95□□□□□ -0.98
DDR1-223ENST00000324771 P0DMU3 169 aa8.95□□□□□ -0.98
DDR1-223ENST00000324771 FAM231AP0DMU4 169 aa8.95□□□□□ -0.98
DDR1-223ENST00000324771 FAM231CP0DMU5 169 aa8.95□□□□□ -0.98
DDR1-223ENST00000324771 TRAV8-2A0A0B4J237 113 aa8.95□□□□□ -0.98
DDR1-223ENST00000324771 F8VRH5 84 aa8.95□□□□□ -0.98
DDR1-223ENST00000324771 GAGE6Q13070 117 aa8.95□□□□□ -0.98
DDR1-223ENST00000324771 C9orf118A6NHY6 69 aa8.94□□□□□ -0.98
DDR1-223ENST00000324771 HLA-DRB4P13762 266 aa8.94□□□□□ -0.98
DDR1-223ENST00000324771 BOD1L2Q8IYS8 172 aa8.94□□□□□ -0.98
DDR1-223ENST00000324771 LENEPQ9Y5L5 61 aa8.94□□□□□ -0.98
DDR1-223ENST00000324771 HLA-DRB4X5D2U9 266 aa8.94□□□□□ -0.98
DDR1-223ENST00000324771 I3L3M4 83 aa8.94□□□□□ -0.98
DDR1-223ENST00000324771 PRR9Q5T870 116 aa8.94□□□□□ -0.98
DDR1-223ENST00000324771 SH2D6Q7Z4S9 175 aa8.94□□□□□ -0.98
DDR1-223ENST00000324771 LAMA5O15230 3695 aa8.94□□□□□ -0.98
DDR1-223ENST00000324771 A0A0J9YY99 117 aa8.94□□□□□ -0.98
DDR1-223ENST00000324771 F8W735 103 aaPredicted RBP8.94□□□□□ -0.98
DDR1-223ENST00000324771 CTRLP40313 264 aa8.94□□□□□ -0.98
DDR1-223ENST00000324771 PMVKQ15126 192 aa8.94□□□□□ -0.98
DDR1-223ENST00000324771 AMTNQ6UX39 209 aa8.94□□□□□ -0.98
DDR1-223ENST00000324771 K7EP34 96 aa8.93□□□□□ -0.98
DDR1-223ENST00000324771 PGPEP1Q9NXJ5 209 aa8.93□□□□□ -0.98
DDR1-223ENST00000324771 A0A0J9YX75 114 aa8.93□□□□□ -0.98
DDR1-223ENST00000324771 LINC00158P58513 81 aa8.93□□□□□ -0.98
DDR1-223ENST00000324771 C1QTNF4Q9BXJ3 329 aa8.93□□□□□ -0.98
DDR1-223ENST00000324771 IGSF10Q6WRI0 2623 aa8.93□□□□□ -0.98
DDR1-223ENST00000324771 F5H768 121 aa8.93□□□□□ -0.98
DDR1-223ENST00000324771 LRBAP50851 2863 aa8.92□□□□□ -0.98
DDR1-223ENST00000324771 A8MWV9 139 aa8.92□□□□□ -0.98
DDR1-223ENST00000324771 ZFAND6Q6FIF0 208 aa8.92□□□□□ -0.98
DDR1-223ENST00000324771 CEMP1Q6PRD7 247 aaPredicted RBP8.92□□□□□ -0.98
DDR1-223ENST00000324771 SVIPQ8NHG7 77 aa8.92□□□□□ -0.98
DDR1-223ENST00000324771 TIMM21Q9BVV7 248 aa8.92□□□□□ -0.98
DDR1-223ENST00000324771 CLPSL1A2RUU4 121 aa8.92□□□□□ -0.98
DDR1-223ENST00000324771 G3V4G9 280 aa8.92□□□□□ -0.98
DDR1-223ENST00000324771 GATD1Q8NB37 220 aa8.92□□□□□ -0.98
DDR1-223ENST00000324771 A0A0J9YXV3 536 aa8.91□□□□□ -0.98
DDR1-223ENST00000324771 K7EMT4 169 aa8.91□□□□□ -0.98
DDR1-223ENST00000324771 LINC00310P59036 64 aa8.91□□□□□ -0.98
DDR1-223ENST00000324771 Q6YL49 198 aa8.91□□□□□ -0.98
DDR1-223ENST00000324771 PRIMA1Q86XR5 153 aa8.91□□□□□ -0.98
DDR1-223ENST00000324771 TRBV7-9A0A0J9YWB2 115 aa8.91□□□□□ -0.98
DDR1-223ENST00000324771 H3BMG7 143 aa8.91□□□□□ -0.98
DDR1-223ENST00000324771 M0R2P5 195 aa8.91□□□□□ -0.98
DDR1-223ENST00000324771 MALP21145 153 aa8.91□□□□□ -0.98
DDR1-223ENST00000324771 GAGE2BQ13066 116 aa8.91□□□□□ -0.98
DDR1-223ENST00000324771 GAGE2EQ4V326 116 aa8.91□□□□□ -0.98
DDR1-223ENST00000324771 Q6ZSV7 163 aa8.91□□□□□ -0.98
DDR1-223ENST00000324771 ZFAND2AQ8N6M9 145 aa8.91□□□□□ -0.98
DDR1-223ENST00000324771 GAGE2DQ9UEU5 116 aa8.91□□□□□ -0.98
DDR1-223ENST00000324771 IGLC6P0CF74 106 aa8.9□□□□□ -0.98
DDR1-223ENST00000324771 LINC01545Q5VT33 79 aa8.9□□□□□ -0.98
DDR1-223ENST00000324771 SPAG8Q99932 426 aaPredicted RBP8.9□□□□□ -0.98
DDR1-223ENST00000324771 C20orf78Q9BR46 151 aa8.9□□□□□ -0.98
DDR1-223ENST00000324771 ZFHX4Q86UP3 3567 aa8.9□□□□□ -0.98
DDR1-223ENST00000324771 PIFOQ8TCI5 191 aa8.9□□□□□ -0.98
DDR1-223ENST00000324771 RHODO00212 210 aa8.9□□□□□ -0.99
DDR1-223ENST00000324771 HERV-K104P63124 156 aa8.9□□□□□ -0.99
DDR1-223ENST00000324771 WFDC10AQ9H1F0 79 aa8.9□□□□□ -0.99
DDR1-223ENST00000324771 A0A1W2PPM0 123 aa8.89□□□□□ -0.99
DDR1-223ENST00000324771 LINC01549A6NIU2 74 aa8.89□□□□□ -0.99
DDR1-223ENST00000324771 ZFP2Q6ZN57 461 aa8.89□□□□□ -0.99
DDR1-223ENST00000324771 PFN2P35080 140 aa8.89□□□□□ -0.99
DDR1-223ENST00000324771 INAFM1C9JVW0 142 aa8.89□□□□□ -0.99
DDR1-223ENST00000324771 PROK1P58294 105 aa8.89□□□□□ -0.99
DDR1-223ENST00000324771 ZNF493Q6ZR52 646 aa8.89□□□□□ -0.99
DDR1-223ENST00000324771 ERG28Q9UKR5 140 aa8.89□□□□□ -0.99
DDR1-223ENST00000324771 TRBV25-1A0A075B6N4 114 aa8.88□□□□□ -0.99
DDR1-223ENST00000324771 C6orf226Q5I0X4 101 aa8.88□□□□□ -0.99
DDR1-223ENST00000324771 TRBV20-1A0A075B6N2 111 aa8.88□□□□□ -0.99
DDR1-223ENST00000324771 WFDC2Q14508 124 aa8.88□□□□□ -0.99
DDR1-223ENST00000324771 K7EQG2 157 aa8.88□□□□□ -0.99
DDR1-223ENST00000324771 MYMXA0A1B0GTQ4 84 aa8.87□□□□□ -0.99
DDR1-223ENST00000324771 PSMB8P28062 276 aa8.87□□□□□ -0.99
DDR1-223ENST00000324771 MRPS12O15235 138 aaKnown RBP8.87□□□□□ -0.99
DDR1-223ENST00000324771 CMC4P56277 68 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms