RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 UBR5O95071 2799 aaPredicted RBP16.4■□□□□ 0.22
PNKP-201ENST00000322344 IGLL5B9A064 214 aa16.4■□□□□ 0.22
PNKP-201ENST00000322344 MAP6D1Q9H9H5 199 aa16.4■□□□□ 0.22
PNKP-201ENST00000322344 CRYBG3Q68DQ2 2970 aa16.4■□□□□ 0.22
PNKP-201ENST00000322344 A8MWV9 139 aa16.4■□□□□ 0.22
PNKP-201ENST00000322344 ZNF415Q09FC8 603 aa16.4■□□□□ 0.22
PNKP-201ENST00000322344 SCGB1D4Q6XE38 83 aa16.4■□□□□ 0.22
PNKP-201ENST00000322344 LINC00467Q9BRT7 94 aa16.4■□□□□ 0.22
PNKP-201ENST00000322344 USP9YO00507 2555 aaPredicted RBP16.4■□□□□ 0.22
PNKP-201ENST00000322344 M0R2P5 195 aa16.39■□□□□ 0.21
PNKP-201ENST00000322344 NFE4Q86UQ8 179 aa16.39■□□□□ 0.21
PNKP-201ENST00000322344 P0DMU3 169 aa16.38■□□□□ 0.21
PNKP-201ENST00000322344 FAM231AP0DMU4 169 aa16.38■□□□□ 0.21
PNKP-201ENST00000322344 FAM231CP0DMU5 169 aa16.38■□□□□ 0.21
PNKP-201ENST00000322344 DEFB114Q30KQ6 69 aa16.38■□□□□ 0.21
PNKP-201ENST00000322344 RAX2Q96IS3 184 aa16.38■□□□□ 0.21
PNKP-201ENST00000322344 MAP1AP78559 2803 aaPredicted RBP16.37■□□□□ 0.21
PNKP-201ENST00000322344 TMEM238LA0A1B0GVL6 79 aa16.37■□□□□ 0.21
PNKP-201ENST00000322344 A6NJY4 79 aa16.37■□□□□ 0.21
PNKP-201ENST00000322344 EMP1P54849 157 aa16.37■□□□□ 0.21
PNKP-201ENST00000322344 TMEM170BQ5T4T1 132 aa16.37■□□□□ 0.21
PNKP-201ENST00000322344 ZNF479Q96JC4 524 aa16.37■□□□□ 0.21
PNKP-201ENST00000322344 FAM208BQ5VWN6 2430 aa16.37■□□□□ 0.21
PNKP-201ENST00000322344 AGRNO00468 2067 aa16.37■□□□□ 0.21
PNKP-201ENST00000322344 HTN1P15515 57 aa16.36■□□□□ 0.21
PNKP-201ENST00000322344 RNF151Q2KHN1 245 aa16.36■□□□□ 0.21
PNKP-201ENST00000322344 Q6ZSV7 163 aa16.36■□□□□ 0.21
PNKP-201ENST00000322344 ZNRF2Q8NHG8 242 aa16.36■□□□□ 0.21
PNKP-201ENST00000322344 PLEKHB2Q96CS7 222 aa16.35■□□□□ 0.21
PNKP-201ENST00000322344 CLUHP3Q96NS8 147 aa16.35■□□□□ 0.21
PNKP-201ENST00000322344 TRAV25A0A0B4J276 109 aa16.34■□□□□ 0.21
PNKP-201ENST00000322344 RRN3P1Q2M238 152 aa16.34■□□□□ 0.21
PNKP-201ENST00000322344 INSP01308 110 aa16.33■□□□□ 0.21
PNKP-201ENST00000322344 SRSF9Q13242 221 aaKnown RBP eCLIP16.33■□□□□ 0.21
PNKP-201ENST00000322344 SPXQ9BT56 116 aa16.33■□□□□ 0.21
PNKP-201ENST00000322344 PYGO1Q9Y3Y4 419 aa16.33■□□□□ 0.21
PNKP-201ENST00000322344 DOPEY2Q9Y3R5 2298 aa16.33■□□□□ 0.2
PNKP-201ENST00000322344 TNFRSF18Q9Y5U5 241 aa16.33■□□□□ 0.2
PNKP-201ENST00000322344 POLQO75417 2590 aa16.32■□□□□ 0.2
PNKP-201ENST00000322344 A0A0J9YY99 117 aa16.32■□□□□ 0.2
PNKP-201ENST00000322344 DNAJC9-AS1A6NH13 148 aa16.32■□□□□ 0.2
PNKP-201ENST00000322344 RHODO00212 210 aa16.32■□□□□ 0.2
PNKP-201ENST00000322344 LINC01587Q99440 93 aa16.32■□□□□ 0.2
PNKP-201ENST00000322344 SPANXB1Q9NS25 103 aaPredicted RBP16.32■□□□□ 0.2
PNKP-201ENST00000322344 CSMD2Q7Z408 3487 aa16.32■□□□□ 0.2
PNKP-201ENST00000322344 IGLV4-3A0A075B6K6 122 aa16.31■□□□□ 0.2
PNKP-201ENST00000322344 VCX2Q9H322 139 aa16.31■□□□□ 0.2
PNKP-201ENST00000322344 CRYBA4P53673 196 aa16.31■□□□□ 0.2
PNKP-201ENST00000322344 OPRPNQ99935 248 aaPredicted RBP16.31■□□□□ 0.2
PNKP-201ENST00000322344 LRRK2Q5S007 2527 aa16.3■□□□□ 0.2
PNKP-201ENST00000322344 IGHV3-73A0A0B4J1V6 119 aa16.3■□□□□ 0.2
PNKP-201ENST00000322344 J3QQQ9 107 aa16.3■□□□□ 0.2
PNKP-201ENST00000322344 VPS25Q9BRG1 176 aa16.3■□□□□ 0.2
PNKP-201ENST00000322344 TMEM223A0PJW6 202 aa16.29■□□□□ 0.2
PNKP-201ENST00000322344 LGALS3P17931 250 aaKnown RBP16.29■□□□□ 0.2
PNKP-201ENST00000322344 C11orf72Q8NBR9 251 aa16.29■□□□□ 0.2
PNKP-201ENST00000322344 WFDC11Q8NEX6 87 aa16.29■□□□□ 0.2
PNKP-201ENST00000322344 NAV2Q8IVL1 2488 aa16.29■□□□□ 0.2
PNKP-201ENST00000322344 LEPROTO15243 131 aa16.29■□□□□ 0.2
PNKP-201ENST00000322344 UBE2D1P51668 147 aa16.29■□□□□ 0.2
PNKP-201ENST00000322344 TSPEAR-AS2P59090 65 aa16.29■□□□□ 0.2
PNKP-201ENST00000322344 CFAP126Q5VTH2 177 aa16.29■□□□□ 0.2
PNKP-201ENST00000322344 ZANQ9Y493 2812 aa16.29■□□□□ 0.2
PNKP-201ENST00000322344 PROK1P58294 105 aa16.28■□□□□ 0.2
PNKP-201ENST00000322344 FHL3Q13643 280 aa16.28■□□□□ 0.2
PNKP-201ENST00000322344 BEAN1Q3B7T3 259 aa16.28■□□□□ 0.2
PNKP-201ENST00000322344 DNAJC30Q96LL9 226 aa16.28■□□□□ 0.2
PNKP-201ENST00000322344 PTPN13Q12923 2485 aa16.28■□□□□ 0.2
PNKP-201ENST00000322344 ZFYVE26Q68DK2 2539 aa16.27■□□□□ 0.2
PNKP-201ENST00000322344 SAP30O75446 220 aa16.27■□□□□ 0.2
PNKP-201ENST00000322344 CD28P10747 220 aa16.27■□□□□ 0.2
PNKP-201ENST00000322344 SLC25A29Q8N8R3 303 aa16.27■□□□□ 0.2
PNKP-201ENST00000322344 ZNF22P17026 224 aaPredicted RBP16.26■□□□□ 0.19
PNKP-201ENST00000322344 AMELXQ99217 191 aa16.26■□□□□ 0.19
PNKP-201ENST00000322344 F8W1H4 67 aa16.26■□□□□ 0.19
PNKP-201ENST00000322344 PRM2P04554 102 aa16.26■□□□□ 0.19
PNKP-201ENST00000322344 CREBBPQ92793 2442 aa16.25■□□□□ 0.19
PNKP-201ENST00000322344 RS1O15537 224 aa16.25■□□□□ 0.19
PNKP-201ENST00000322344 IGHV3-53P01767 116 aa16.25■□□□□ 0.19
PNKP-201ENST00000322344 ODF3L2Q3SX64 289 aa16.25■□□□□ 0.19
PNKP-201ENST00000322344 G3V4G9 280 aa16.24■□□□□ 0.19
PNKP-201ENST00000322344 PCP4P48539 62 aa16.24■□□□□ 0.19
PNKP-201ENST00000322344 PGPEP1Q9NXJ5 209 aa16.24■□□□□ 0.19
PNKP-201ENST00000322344 A0A0J9YXV3 536 aa16.24■□□□□ 0.19
PNKP-201ENST00000322344 CCL24O00175 119 aa16.24■□□□□ 0.19
PNKP-201ENST00000322344 STHQ8IWL8 128 aa16.24■□□□□ 0.19
PNKP-201ENST00000322344 SPANXA1Q9NS26 97 aa16.23■□□□□ 0.19
PNKP-201ENST00000322344 MRPL16Q9NX20 251 aaKnown RBP16.23■□□□□ 0.19
PNKP-201ENST00000322344 MXRA5Q9NR99 2828 aa16.23■□□□□ 0.19
PNKP-201ENST00000322344 IGHV3-30P01768 117 aa16.23■□□□□ 0.19
PNKP-201ENST00000322344 IGHV3-30-5P0DP03 117 aa16.23■□□□□ 0.19
PNKP-201ENST00000322344 Q6ZSN1 163 aa16.23■□□□□ 0.19
PNKP-201ENST00000322344 SORL1Q92673 2214 aa16.22■□□□□ 0.19
PNKP-201ENST00000322344 ESM1Q9NQ30 184 aa16.22■□□□□ 0.19
PNKP-201ENST00000322344 MRPS36P82909 103 aaKnown RBP16.21■□□□□ 0.19
PNKP-201ENST00000322344 HIST2H2BDQ6DRA6 164 aa16.21■□□□□ 0.18
PNKP-201ENST00000322344 CHCHD7Q9BUK0 85 aa16.21■□□□□ 0.18
PNKP-201ENST00000322344 FAM104AQ969W3 186 aa16.2■□□□□ 0.18
PNKP-201ENST00000322344 XCL2Q9UBD3 114 aa16.2■□□□□ 0.18
PNKP-201ENST00000322344 A0A1W2PRX2 142 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms